Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G42310 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 1.3e-47 192.6 91 100.0
AT2G43520 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 2.0e-43 178.7 91 93.4
Carub.0004s2598 Capsella rubella HOM05D007394 ORTHO05D009996 4.2e-41 171.0 91 87.9
CARHR138630 Cardamine hirsuta HOM05D007394 ORTHO05D009996 1.4e-36 156.0 91 81.3
Thhalv10001697m.g Eutrema salsugineum HOM05D007394 ORTHO05D009996 1.7e-34 149.1 92 78.3
CARHR138620 Cardamine hirsuta HOM05D007394 ORTHO05D009996 2.2e-34 148.7 93 74.2
A03p24290 Brassica napus HOM05D007394 ORTHO05D009996 3.8e-34 147.9 92 75.0
BraA03t11637Z Brassica rapa HOM05D007394 ORTHO05D009996 3.8e-34 147.9 92 75.0
BraA03t11639Z Brassica rapa HOM05D007394 ORTHO05D009996 3.8e-34 147.9 92 75.0
BcaB02g08929 Brassica carinata HOM05D007394 ORTHO05D009996 1.1e-33 146.4 90 73.3
Sp3g24100 Schrenkiella parvula HOM05D007394 ORTHO05D009996 6.0e-32 140.6 94 73.4
Sp4g25610 Schrenkiella parvula HOM05D007394 ORTHO05D009996 1.3e-31 139.4 89 73.0
A05p03840 Brassica napus HOM05D007394 ORTHO05D009996 1.1e-30 136.3 90 70.0
BraA05t19371Z Brassica rapa HOM05D007394 ORTHO05D009996 1.1e-30 136.3 90 70.0
AL1G53780 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 1.9e-30 135.6 90 71.1
BcaB02g08928 Brassica carinata HOM05D007394 ORTHO05D009996 3.3e-30 134.8 90 68.9
A03p24300 Brassica napus HOM05D007394 ORTHO05D009996 4.3e-30 134.4 92 70.7
BraA03t11640Z Brassica rapa HOM05D007394 ORTHO05D009996 4.3e-30 134.4 92 70.7
AT1G47540 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 5.6e-30 134.0 90 70.0
BraA03t11638Z Brassica rapa HOM05D007394 ORTHO05D009996 1.3e-29 132.9 92 69.6
BcaB01g03378 Brassica carinata HOM05D007394 ORTHO05D009996 1.6e-29 132.5 91 68.1
BcaC02g12378 Brassica carinata HOM05D007394 ORTHO05D009996 4.8e-29 131.0 89 68.5
A05p03820 Brassica napus HOM05D007394 ORTHO05D009996 1.4e-28 129.4 91 65.9
BcaC01g05230 Brassica carinata HOM05D007394 ORTHO05D009996 2.4e-28 128.6 92 68.5
BcaC02g12381 Brassica carinata HOM05D007394 ORTHO05D009996 5.3e-28 127.5 91 67.0
C04p04590 Brassica napus HOM05D007394 ORTHO05D009996 1.2e-27 126.3 90 67.8
BraA05t19373Z Brassica rapa HOM05D007394 ORTHO05D009996 1.2e-27 126.3 90 67.8
Sp4g25600 Schrenkiella parvula HOM05D007394 ORTHO05D009996 1.2e-27 126.3 90 64.4
BcaB02g08934 Brassica carinata HOM05D007394 ORTHO05D009996 2.0e-27 125.6 91 64.8
Thhalv10001746m.g Eutrema salsugineum HOM05D007394 ORTHO05D009996 2.0e-27 125.6 90 65.6
BcaC02g12386 Brassica carinata HOM05D007394 ORTHO05D009996 2.6e-27 125.2 91 63.7
C04p04520 Brassica napus HOM05D007394 ORTHO05D009996 2.6e-27 125.2 91 63.7
BolC4t22090H Brassica oleracea HOM05D007394 ORTHO05D009996 3.4e-27 124.8 90 66.7
A05p03830 Brassica napus HOM05D007394 ORTHO05D009996 4.5e-27 124.4 90 67.8
C04p70500 Brassica napus HOM05D007394 ORTHO05D009996 1.0e-26 123.2 90 64.4
AL4G42320 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 1.3e-26 122.9 95 60.0
Aa31LG1G25280 Aethionema arabicum HOM05D007459 ORTHO05D009234 2.9e-26 121.7 87 67.8
Aa31LG1G25260 Aethionema arabicum HOM05D007394 ORTHO05D009996 3.8e-26 121.3 94 64.9
BcaC02g12384 Brassica carinata HOM05D007394 ORTHO05D009996 3.8e-26 121.3 91 63.7
C04p04540 Brassica napus HOM05D007394 ORTHO05D009996 3.8e-26 121.3 91 63.7
BolC4t22087H Brassica oleracea HOM05D007394 ORTHO05D009996 3.8e-26 121.3 91 63.7
BcaC02g12382 Brassica carinata HOM05D007394 ORTHO05D009996 8.4e-26 120.2 89 62.9
C04p04550 Brassica napus HOM05D007394 ORTHO05D009996 8.4e-26 120.2 89 62.9
CARHR138610 Cardamine hirsuta HOM05D007394 ORTHO05D009996 8.4e-26 120.2 90 63.3
Carub.0004s2597 Capsella rubella HOM05D007394 ORTHO05D009996 1.9e-25 119.0 87 60.9
A04p32800 Brassica napus HOM05D007394 ORTHO05D009996 2.5e-25 118.6 90 64.4
BraA04t18742Z Brassica rapa HOM05D007394 ORTHO05D009996 2.5e-25 118.6 90 64.4
AL2G24960 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 5.5e-25 117.5 89 62.9
AT2G43510 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 9.3e-25 116.7 90 60.0
THA.LOC104803941 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 1.6e-24 115.9 89 60.7
A04p32810 Brassica napus HOM05D007394 ORTHO05D009996 3.5e-24 114.8 89 62.9
BraA04t18743Z Brassica rapa HOM05D007394 ORTHO05D009996 3.5e-24 114.8 89 62.9
BcaB06g29320 Brassica carinata HOM05D007394 ORTHO05D009996 4.6e-24 114.4 90 61.1
AL4G42300 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 1.0e-23 113.2 90 58.9
AL8G26520 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 1.0e-23 113.2 90 61.1
Carub.0004s2599 Capsella rubella HOM05D007394 ORTHO05D009996 1.8e-23 112.5 90 55.6
A04p32790 Brassica napus HOM05D007394 ORTHO05D009996 2.3e-23 112.1 86 61.6
THA.LOC104803932 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 1.5e-22 109.4 87 58.6
BcaB02g10434 Brassica carinata HOM05D007394 ORTHO05D009996 1.9e-22 109.0 88 59.1
Sp3g24200 Schrenkiella parvula HOM05D007394 ORTHO05D009996 3.3e-22 108.2 89 60.7
BcaB06g29322 Brassica carinata HOM05D007394 ORTHO05D009996 4.3e-22 107.8 68 69.1
BcaB06g29321 Brassica carinata HOM05D007394 ORTHO05D009996 5.7e-22 107.5 68 69.1
BolC4t28552H Brassica oleracea HOM05D007394 ORTHO05D009996 9.7e-22 106.7 89 60.7
Carub.0002s0551 Capsella rubella HOM05D007394 ORTHO05D009996 9.7e-22 106.7 90 53.3
BcaB02g08930 Brassica carinata HOM05D007394 ORTHO05D009996 1.3e-21 106.3 89 59.6
BolC3t15251H Brassica oleracea HOM05D007394 ORTHO05D009996 1.3e-21 106.3 73 72.6
BcaC02g07171 Brassica carinata HOM05D007394 ORTHO05D009996 2.2e-21 105.5 94 58.5
C04p70530 Brassica napus HOM05D007394 ORTHO05D009996 2.2e-21 105.5 89 58.4
AT2G43535 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 2.8e-21 105.1 69 62.3
Carub.0004s2602 Capsella rubella HOM05D007394 ORTHO05D009996 2.8e-21 105.1 89 57.3
CARHR138650 Cardamine hirsuta HOM05D007394 ORTHO05D009996 2.8e-21 105.1 90 53.3
CARHR138640 Cardamine hirsuta HOM05D007394 ORTHO05D009996 3.7e-21 104.8 95 54.7
THA.LOC109116252 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 4.1e-20 101.3 89 53.9
THA.LOC104798701 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 5.3e-20 100.9 90 58.9
AT2G43530 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 1.5e-19 99.4 90 55.6
BcaC02g07168 Brassica carinata HOM05D007459 ORTHO05D009234 1.5e-19 99.4 73 63.0
BcaC02g07172 Brassica carinata HOM05D007394 ORTHO05D009996 1.0e-18 96.7 69 59.4
Aa31LG1G24860 Aethionema arabicum HOM05D007394 ORTHO05D009996 6.5e-18 94.0 66 63.6
THA.LOC104805814 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 8.5e-18 93.6 87 50.6
BcaB06g29323 Brassica carinata HOM05D007394 ORTHO05D009996 9.3e-17 90.1 73 54.8
AT2G43550 Arabidopsis thaliana HOM05D007394 ORTHO05D015383 2.5e-14 82.0 88 48.9
AL4G42350 Arabidopsis lyrata HOM05D007394 ORTHO05D015383 5.7e-14 80.9 87 48.3
Carub.0004s2604 Capsella rubella HOM05D007394 ORTHO05D009996 5.7e-14 80.9 93 45.2
Sp4g02290 Schrenkiella parvula HOM05D007394 ORTHO05D009234 1.3e-13 79.7 91 44.0
CARHR138680 Cardamine hirsuta HOM05D007394 ORTHO05D015383 4.8e-13 77.8 87 48.3
Carub.0004s2601 Capsella rubella HOM05D007394 ORTHO05D009996 6.3e-13 77.4 91 48.4
Carub.0004s2603 Capsella rubella HOM05D007394 ORTHO05D015383 6.3e-13 77.4 87 46.0
Thhalv10001696m.g Eutrema salsugineum HOM05D007394 ORTHO05D015383 8.2e-13 77.0 84 45.2
C04p70540 Brassica napus HOM05D007394 ORTHO05D015383 1.1e-12 76.6 88 46.6
CARHR123510 Cardamine hirsuta HOM05D014590 ORTHO05D017585 1.1e-12 76.6 93 45.2
THA.LOC104803915 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 1.8e-12 75.9 89 42.7
BcaB06g29326 Brassica carinata HOM05D007394 ORTHO05D015383 2.4e-12 75.5 88 46.6
BcaC02g07166 Brassica carinata HOM05D007394 ORTHO05D015383 2.4e-12 75.5 88 46.6
BolC4t28555H Brassica oleracea HOM05D007394 ORTHO05D015383 2.4e-12 75.5 88 46.6
Sp4g25660 Schrenkiella parvula HOM05D007394 ORTHO05D015383 2.4e-12 75.5 87 46.0
A04p32830 Brassica napus HOM05D007394 ORTHO05D015383 3.1e-12 75.1 88 46.6
BraA04t18745Z Brassica rapa HOM05D007394 ORTHO05D015383 3.1e-12 75.1 88 46.6
A04p32770 Brassica napus HOM05D007394 ORTHO05D033140 1.5e-11 72.8 91 49.5
BraA04t18740Z Brassica rapa HOM05D007394 ORTHO05D033140 1.5e-11 72.8 91 49.5
BolC4t28551H Brassica oleracea HOM05D007394 ORTHO05D033140 1.0e-10 70.1 90 45.6
C04p70470 Brassica napus HOM05D007394 ORTHO05D009234 2.9e-10 68.6 94 45.7
A04p32760 Brassica napus HOM05D007394 ORTHO05D009234 6.5e-10 67.4 94 44.7
A04p02110 Brassica napus HOM05D014590 ORTHO05D017585 3.2e-09 65.1 93 43.0
BraA04t15937Z Brassica rapa HOM05D014590 ORTHO05D017585 3.2e-09 65.1 93 43.0
BcaC02g10070 Brassica carinata HOM05D014590 ORTHO05D017585 1.4e-07 59.7 93 39.8


User provided reference genes

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