Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G39630 Arabidopsis lyrata HOM05D005608 ORTHO05D007543 8.2e-168 593.6 285 100.0
AT2G41530 Arabidopsis thaliana HOM05D005608 ORTHO05D007543 2.5e-161 572.0 285 95.4
CARHR136660 Cardamine hirsuta HOM05D005608 ORTHO05D007543 5.7e-161 570.9 285 95.8
BcaNung04068 Brassica carinata HOM05D005608 ORTHO05D007543 4.1e-159 564.7 285 94.0
BcaC01g05330 Brassica carinata HOM05D005608 ORTHO05D007543 1.0e-157 560.1 285 93.0
Sp4g23810 Schrenkiella parvula HOM05D005608 ORTHO05D007543 1.3e-157 559.7 285 92.6
A03p23310 Brassica napus HOM05D005608 ORTHO05D007543 2.9e-157 558.5 285 92.3
C03p27830 Brassica napus HOM05D005608 ORTHO05D007543 2.9e-157 558.5 285 93.0
BraA03t11549Z Brassica rapa HOM05D005608 ORTHO05D007543 2.9e-157 558.5 285 92.3
BolC3t15154H Brassica oleracea HOM05D005608 ORTHO05D007543 1.1e-156 556.6 285 92.3
BcaB01g03463 Brassica carinata HOM05D005608 ORTHO05D007543 1.4e-156 556.2 285 92.6
Carub.0004s2382 Capsella rubella HOM05D005608 ORTHO05D007543 2.5e-156 555.4 285 92.3
Thhalv10017045m.g Eutrema salsugineum HOM05D005608 ORTHO05D007543 7.2e-156 553.9 285 91.6
BraA05t19229Z Brassica rapa HOM05D005608 ORTHO05D007543 2.7e-155 552.0 286 93.4
C04p02790 Brassica napus HOM05D005608 ORTHO05D007543 3.6e-155 551.6 286 93.0
BolC4t21919H Brassica oleracea HOM05D005608 ORTHO05D007543 3.6e-155 551.6 286 93.0
A05p02350 Brassica napus HOM05D005608 ORTHO05D007543 1.8e-154 549.3 286 92.7
Aa31LG1G23580 Aethionema arabicum HOM05D005608 ORTHO05D007543 3.1e-151 538.5 286 89.2
Oeu017928.1 Olea europaea HOM05D005608 ORTHO05D007543 4.5e-142 508.1 280 83.2
Gohir.A01G193800 Gossypium hirsutum HOM05D005608 ORTHO05D007543 5.9e-142 507.7 285 82.8
Gohir.D01G184100 Gossypium hirsutum HOM05D005608 ORTHO05D007543 1.3e-141 506.5 285 83.5
Gorai.002G227600 Gossypium raimondii HOM05D005608 ORTHO05D007543 1.3e-141 506.5 285 83.5
EL10Ac3g07137 Beta vulgaris HOM05D005608 ORTHO05D007543 2.2e-141 505.8 285 83.5
Thecc.05G148100 Theobroma cacao HOM05D005608 ORTHO05D007543 6.5e-141 504.2 285 82.8
Manes.08G052000 Manihot esculenta HOM05D005608 ORTHO05D007543 1.1e-140 503.4 285 82.1
PSO339G6269 Papaver somniferum HOM05D005608 ORTHO05D007543 1.4e-140 503.1 285 82.1
PSO384G3225 Papaver somniferum HOM05D005608 ORTHO05D007543 3.2e-140 501.9 285 81.8
THA.LOC104801987 Tarenaya hassleriana HOM05D005608 ORTHO05D007543 3.2e-140 501.9 284 82.7
Hund24681 Selenicereus undatus HOM05D005608 ORTHO05D007543 5.5e-140 501.1 285 81.8
Hma1.2p1_0110F.1_g052840 Hydrangea macrophylla HOM05D005608 ORTHO05D007543 1.2e-139 500.0 280 82.5
Hma1.2p1_1997F.1_g310445 Hydrangea macrophylla HOM05D005608 ORTHO05D007543 1.2e-139 500.0 280 82.5
QL07p003736 Quercus lobata HOM05D005608 ORTHO05D007543 1.6e-139 499.6 284 82.4
Duzib106G2070 Durio zibethinus HOM05D005608 ORTHO05D007543 2.7e-139 498.8 285 82.1
TWI77G0221 Tripterygium wilfordii HOM05D005608 ORTHO05D007543 2.7e-139 498.8 279 82.8
Nn2g15128 Nelumbo nucifera HOM05D005608 ORTHO05D007543 6.1e-139 497.7 280 83.9
Sopen04g008450 Solanum pennellii HOM05D005608 ORTHO05D007543 1.0e-138 496.9 280 82.1
GSVIVG01033232001 Vitis vinifera HOM05D005608 ORTHO05D007543 1.0e-138 496.9 284 81.3
PGSC0003DMG401012699 Solanum tuberosum HOM05D005608 ORTHO05D007543 1.4e-138 496.5 280 81.8
Nitab4.5_0001618g0150 Nicotiana tabacum HOM05D005608 ORTHO05D007543 1.8e-138 496.1 285 81.1
CiPaw.09G040300 Carya illinoinensis HOM05D005608 ORTHO05D007543 3.0e-138 495.4 284 81.7
Sabra06G0032700 Salix brachista HOM05D005608 ORTHO05D007543 3.9e-138 495.0 285 81.4
Solyc04g016360.3 Solanum lycopersicum HOM05D005608 ORTHO05D007543 3.9e-138 495.0 280 81.8
CAN.G676.7 Capsicum annuum HOM05D005608 ORTHO05D007543 8.8e-138 493.8 285 79.6
Sc19g0008540 Simmondsia chinensis HOM05D005608 ORTHO05D007543 1.1e-137 493.4 285 81.4
Aqoxy2G00245 Aquilegia oxysepala HOM05D005608 ORTHO05D007543 1.5e-137 493.0 285 80.0
Lalb_Chr06g0173501 Lupinus albus HOM05D005608 ORTHO05D007543 1.5e-137 493.0 285 81.1
Phvul.007G250500 Phaseolus vulgaris HOM05D005608 ORTHO05D007543 1.5e-137 493.0 284 79.9
Nitab4.5_0000826g0060 Nicotiana tabacum HOM05D005608 ORTHO05D007543 2.0e-137 492.7 285 80.7
Cfa016779 Carpinus fangiana HOM05D005608 ORTHO05D007543 3.3e-137 491.9 284 82.0
Lj1A1125T63 Lonicera japonica HOM05D005608 ORTHO05D007543 4.4e-137 491.5 288 81.2
CSS0026365 Camellia sinensis var. sinensis HOM05D005608 ORTHO05D007543 5.7e-137 491.1 285 80.4
RcHm_v2.0_Chr3g0483631 Rosa chinensis HOM05D005608 ORTHO05D007543 5.7e-137 491.1 279 82.1
Atru.chr1.1230 Acer truncatum HOM05D005608 ORTHO05D007543 9.7e-137 490.3 285 80.7
Ciclev10005572m.g Citrus clementina HOM05D005608 ORTHO05D007543 1.7e-136 489.6 285 79.6
Haze_19791 Corylus avellana HOM05D005608 ORTHO05D007543 1.7e-136 489.6 284 81.3
Haze_19795 Corylus avellana HOM05D005608 ORTHO05D007543 1.7e-136 489.6 284 81.3
DCAR_013613 Daucus carota HOM05D005608 ORTHO05D007543 2.2e-136 489.2 283 80.6
HanXRQChr04g0125051 Helianthus annuus HOM05D005608 ORTHO05D007543 2.2e-136 489.2 278 82.7
TAR369G0715 Trochodendron aralioides HOM05D005608 ORTHO05D007543 2.2e-136 489.2 283 81.6
Cc06_g18100 Coffea canephora HOM05D005608 ORTHO05D007543 2.8e-136 488.8 284 79.9
VMungo0720G2960 Vigna mungo HOM05D005608 ORTHO05D007543 2.8e-136 488.8 284 79.6
Potri.006G047000 Populus trichocarpa HOM05D005608 ORTHO05D007543 3.7e-136 488.4 285 80.0
MELO3C026333.2 Cucumis melo HOM05D005608 ORTHO05D007543 4.8e-136 488.0 284 79.9
Actinidia39202 Actinidia chinensis HOM05D005608 ORTHO05D007543 6.3e-136 487.6 285 80.0
Sed0023334 Sechium edule HOM05D005608 ORTHO05D007543 8.2e-136 487.3 284 80.3
vmacro21968 Vaccinium macrocarpon HOM05D005608 ORTHO05D007543 8.2e-136 487.3 285 80.4
Glyma.02G186700 Glycine max HOM05D005608 ORTHO05D007543 1.8e-135 486.1 284 80.3
Lj5g0018305 Lotus japonicus HOM05D005608 ORTHO05D007543 1.8e-135 486.1 280 81.1
Prupe.7G053400 Prunus persica HOM05D005608 ORTHO05D007543 1.8e-135 486.1 286 79.7
CsaV3_4G027510 Cucumis sativus L. HOM05D005608 ORTHO05D007543 2.4e-135 485.7 284 79.9
SalBow6G4364 Salvia bowleyana HOM05D005608 ORTHO05D007543 3.1e-135 485.3 284 78.2
CANSAT80G2626 Cannabis sativa HOM05D005608 ORTHO05D007543 4.1e-135 485.0 285 80.0
MSTRG.26133 Avicennia marina HOM05D005608 ORTHO05D007543 5.3e-135 484.6 282 80.1
FAN02G1028 Fragaria x ananassa HOM05D005608 ORTHO05D007543 5.3e-135 484.6 284 79.6
FAN05G0975 Fragaria x ananassa HOM05D005608 ORTHO05D007543 5.3e-135 484.6 286 79.7
arahy.Tifrunner.gnm1.ann1.RCN63F Arachis hypogaea HOM05D005608 ORTHO05D007543 7.0e-135 484.2 283 80.6
FvH4_6g24520 Fragaria vesca HOM05D005608 ORTHO05D007543 7.0e-135 484.2 279 80.6
Glyma.10G106900 Glycine max HOM05D005608 ORTHO05D007543 7.0e-135 484.2 283 79.5
TAR369G0194 Trochodendron aralioides HOM05D005608 ORTHO05D007543 7.0e-135 484.2 283 80.9
MSTRG.19838 Avicennia marina HOM05D005608 ORTHO05D007543 1.6e-134 483.0 279 79.2
MD14G1077300 Malus domestica HOM05D005608 ORTHO05D007543 2.6e-134 482.3 284 78.5
Rhsim03G0028900 Rhododendron simsii HOM05D005608 ORTHO05D007543 3.5e-134 481.9 283 81.3
Medtr4g008660 Medicago truncatula HOM05D005608 ORTHO05D007543 4.5e-134 481.5 280 80.0
TAR633G2234 Trochodendron aralioides HOM05D005608 ORTHO05D007543 7.7e-134 480.7 285 79.6
Migut.J01725 Erythranthe guttata HOM05D005608 ORTHO05D007543 1.3e-133 479.9 279 79.6
SGA_v2.0_scaffold273G46432 Striga asiatica HOM05D005608 ORTHO05D007543 1.7e-133 479.6 273 80.6
TPR.G19657 Trifolium pratense HOM05D005608 ORTHO05D007543 1.7e-133 479.6 280 79.6
AUR62026096 Chenopodium quinoa HOM05D005608 ORTHO05D007543 2.2e-133 479.2 302 76.5
ECA236G2378 Erigeron canadensis HOM05D005608 ORTHO05D007543 6.5e-133 477.6 270 81.9
Eucgr.K02019 Eucalyptus grandis HOM05D005608 ORTHO05D007543 1.1e-132 476.9 287 79.1
Peaxi162Scf00130g00829 Petunia axillaris HOM05D005608 ORTHO05D007543 1.5e-132 476.5 285 77.2
CANSAT80G0897 Cannabis sativa HOM05D005608 ORTHO05D007543 3.2e-132 475.3 290 77.9
FAN14G1555 Fragaria x ananassa HOM05D005608 ORTHO05D007543 3.2e-132 475.3 282 79.1
Medtr1g052175 Medicago truncatula HOM05D005608 ORTHO05D007543 3.2e-132 475.3 280 79.3
arahy.Tifrunner.gnm1.ann1.QZL5XH Arachis hypogaea HOM05D005608 ORTHO05D007543 1.6e-131 473.0 297 76.8
HPP92_001434 Vanilla planifolia HOM05D005608 ORTHO05D007543 5.2e-130 468.0 277 78.0
Ca_12257_v3 Cicer arietinum L. HOM05D005608 ORTHO05D007543 5.7e-129 464.5 278 79.5
Lsat_1_v5_gn_8_82180 Lactuca sativa HOM05D005608 ORTHO05D007543 2.4e-127 459.1 326 68.1
SEGI_13354 Sequoiadendron giganteum HOM05D005608 ORTHO05D007543 3.1e-127 458.8 279 76.3
Peaxi162Scf00130g00828 Petunia axillaris HOM05D005608 ORTHO05D007543 4.1e-127 458.4 285 76.1
CDE05G0378 Ceratophyllum demersum HOM05D005608 ORTHO05D007543 5.3e-127 458.0 277 76.5
Ca_12243_v3 Cicer arietinum L. HOM05D005608 ORTHO05D007543 7.0e-127 457.6 282 78.0
Os01g0939700 Oryza sativa ssp. japonica HOM05D005608 ORTHO05D007543 2.0e-126 456.1 281 74.7
Nitab4.5_0000636g0050 Nicotiana tabacum HOM05D005608 ORTHO05D007543 1.0e-125 453.8 285 75.4
Sed0008486 Sechium edule HOM05D005608 ORTHO05D007543 2.9e-125 452.2 284 73.2
ATR0721G011 Amborella trichopoda HOM05D005608 ORTHO05D007543 1.1e-124 450.3 276 75.7
ClCG04G003700 Citrullus lanatus HOM05D005608 ORTHO05D007543 1.5e-124 449.9 284 75.4
AUR62024510 Chenopodium quinoa HOM05D005608 ORTHO05D007543 4.4e-121 438.3 236 87.3
Cpa.g.sc182.15 Carica papaya HOM05D005608 ORTHO05D007543 1.7e-120 436.4 247 83.4
Pp3c11_8660 Physcomitrium patens HOM05D005608 ORTHO05D007543 5.5e-116 421.4 280 69.6
Sed0024564 Sechium edule HOM05D005608 ORTHO05D007543 7.2e-116 421.0 284 69.7
unitig_21.g20519 Utricularia gibba HOM05D005608 ORTHO05D007543 3.6e-115 418.7 237 82.3
Eucgr.K01713 Eucalyptus grandis HOM05D005608 ORTHO05D007543 7.5e-113 411.0 275 71.3
MBI19_g29889_MAGBIO Magnolia biondii HOM05D005608 ORTHO05D007543 7.5e-113 411.0 233 79.4
Mapoly0020s0136 Marchantia polymorpha HOM05D005608 ORTHO05D007543 3.8e-109 398.7 280 66.1
CBR_g12387 Chara braunii HOM05D005608 ORTHO05D007543 2.8e-107 392.5 284 65.8
SMO174G0027 Selaginella moellendorffii HOM05D005608 ORTHO05D007543 2.3e-106 389.4 283 66.4
MD12G1082500 Malus domestica HOM05D005608 ORTHO05D007543 2.2e-104 382.9 225 80.0
Zm00001eb363240 Zea mays HOM05D005608 ORTHO05D007543 2.3e-101 372.9 223 78.5
Dinv39657 Davidia involucrata HOM05D005608 ORTHO05D007543 1.1e-98 364.0 196 87.2
Cre03.g158800 Chlamydomonas reinhardtii HOM05D005608 ORTHO05D007543 1.2e-89 334.0 283 56.2
SalBow6G3992 Salvia bowleyana HOM05D005608 ORTHO05D007543 4.1e-87 325.5 292 56.8
COL.COLO4_32782 Corchorus olitorius HOM05D005608 ORTHO05D007543 7.3e-84 314.7 273 59.0
Psat6g091560 Pisum sativum HOM05D005608 ORTHO05D007543 4.6e-78 295.4 171 81.3
TPR.G19661 Trifolium pratense HOM05D005608 ORTHO05D007543 1.9e-76 290.0 169 79.9
Haze_27232 Corylus avellana HOM05D005608 ORTHO05D007543 1.8e-74 283.5 264 51.9
Haze_26706 Corylus avellana HOM05D005608 ORTHO05D007543 2.2e-64 250.0 280 45.7
MCO09G089 Micromonas commoda HOM05D000219 ORTHO05D000226 7.9e-62 241.5 280 47.9
Medtr0931s0010 Medicago truncatula HOM05D005608 ORTHO05D044358 1.3e-61 240.7 231 55.0
PRCOL_00003320 Prasinoderma coloniale HOM05D000219 ORTHO05D000226 3.3e-60 236.1 278 47.1
Medtr1g052165 Medicago truncatula HOM05D005608 ORTHO05D048895 2.5e-47 193.4 114 77.2
TPR.G23055 Trifolium pratense HOM05D005608 ORTHO05D048895 9.0e-42 174.9 103 75.7
Zm00001eb010250 Zea mays HOM05D005608 ORTHO05D007543 1.4e-23 114.4 78 73.1
Zm00001eb141600 Zea mays HOM05D005608 ORTHO05D007543 7.7e-17 92.0 67 64.2
SEGI_35043 Sequoiadendron giganteum HOM05D005608 ORTHO05D384886 3.4e-12 76.6 52 69.2
Pp3c1_10050 Physcomitrium patens HOM05D005608 ORTHO05D319324 6.3e-11 72.4 56 55.4


User provided reference genes

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