Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G39240 Arabidopsis lyrata HOM05D009511 ORTHO05D011751 4.8e-101 371.7 220 100.0
AT2G41260 Arabidopsis thaliana HOM05D009511 ORTHO05D011751 7.3e-73 278.1 225 79.1
AL4G39260 Arabidopsis lyrata HOM05D009511 ORTHO05D011751 4.2e-44 182.6 118 80.5
Carub.0004s2358 Capsella rubella HOM05D009511 ORTHO05D011751 3.1e-31 139.8 231 49.4
AT2G41280 Arabidopsis thaliana HOM05D009511 ORTHO05D011751 9.0e-31 138.3 116 69.0
BolC3t15134H Brassica oleracea HOM05D009511 ORTHO05D011751 1.6e-27 127.5 215 44.7
BraA05t19214Z Brassica rapa HOM05D009511 ORTHO05D011751 1.3e-24 117.9 124 61.3
A05p02180 Brassica napus HOM05D009511 ORTHO05D011751 3.7e-24 116.3 124 60.5
CARHR136360 Cardamine hirsuta HOM05D009511 ORTHO05D011751 1.4e-23 114.4 178 46.1
Thhalv10017768m.g Eutrema salsugineum HOM05D009511 ORTHO05D011751 1.4e-23 114.4 176 47.2
BcaC02g12770 Brassica carinata HOM05D009511 ORTHO05D011751 8.4e-21 105.1 117 59.8
BolC4t21902H Brassica oleracea HOM05D009511 ORTHO05D011751 4.3e-17 92.8 108 59.3
Thhalv10017269m.g Eutrema salsugineum HOM05D009511 ORTHO05D011751 2.1e-16 90.5 104 55.8
CARHR136350 Cardamine hirsuta HOM05D009511 ORTHO05D011751 1.1e-15 88.2 107 56.1
Sp4g23580 Schrenkiella parvula HOM05D009511 ORTHO05D011751 5.3e-15 85.9 109 54.1
BcaC01g05349 Brassica carinata HOM05D009511 ORTHO05D011751 1.2e-14 84.7 116 50.9
C03p27640 Brassica napus HOM05D009511 ORTHO05D011751 1.2e-14 84.7 116 50.9
A04p31460 Brassica napus HOM05D009511 ORTHO05D011751 3.4e-14 83.2 139 52.5
BcaC02g12890 Brassica carinata HOM05D009511 ORTHO05D011751 1.0e-13 81.6 115 50.4
C04p68870 Brassica napus HOM05D009511 ORTHO05D011751 1.7e-13 80.9 139 51.8
BraA04t18604Z Brassica rapa HOM05D009511 ORTHO05D011751 1.7e-13 80.9 139 51.8
BraA05t19213Z Brassica rapa HOM05D009511 ORTHO05D011751 3.8e-13 79.7 108 52.8
A05p02170 Brassica napus HOM05D009511 ORTHO05D011751 5.0e-13 79.3 108 53.7
BcaB01g03477 Brassica carinata HOM05D009511 ORTHO05D011751 1.8e-10 70.9 122 43.4
BcaC02g12769 Brassica carinata HOM05D009511 ORTHO05D011751 9.7e-09 65.1 108 47.2
Aa31LG3G740 Aethionema arabicum HOM05D009511 ORTHO05D011751 2.2e-08 63.9 176 35.2
C04p02590 Brassica napus HOM05D009511 ORTHO05D101037 3.4e-06 56.6 77 53.2


User provided reference genes

Program Settings