Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G39090 Arabidopsis lyrata HOM05D007528 ORTHO05D008503 6.4e-143 510.8 262 100.0
AT2G41120 Arabidopsis thaliana HOM05D007528 ORTHO05D008503 5.4e-134 481.1 262 94.7
Carub.0004s2343 Capsella rubella HOM05D007528 ORTHO05D008503 3.5e-125 451.8 262 88.5
Sp4g23430 Schrenkiella parvula HOM05D007528 ORTHO05D008503 2.6e-120 435.6 262 85.9
Thhalv10017145m.g Eutrema salsugineum HOM05D007528 ORTHO05D008503 9.9e-120 433.7 262 86.3
BraA04t18594Z Brassica rapa HOM05D007528 ORTHO05D008503 4.5e-112 408.3 260 82.3
A04p31360 Brassica napus HOM05D007528 ORTHO05D008503 2.5e-110 402.5 260 81.5
C04p68770 Brassica napus HOM05D007528 ORTHO05D008503 7.1e-110 401.0 263 79.5
BolC4t28382H Brassica oleracea HOM05D007528 ORTHO05D008503 1.2e-109 400.2 260 79.6
CARHR136210 Cardamine hirsuta HOM05D007528 ORTHO05D008503 4.8e-106 388.3 264 81.1
BcaNung05626 Brassica carinata HOM05D007528 ORTHO05D008503 1.2e-101 373.6 266 77.4
THA.LOC104803254 Tarenaya hassleriana HOM05D007528 ORTHO05D008503 3.0e-100 369.0 261 74.7
Aa31LG3G960 Aethionema arabicum HOM05D007528 ORTHO05D008503 4.8e-98 361.7 263 70.7
TAR623G0014 Trochodendron aralioides HOM05D007528 ORTHO05D008503 1.5e-67 260.4 215 62.3
Manes.09G073900 Manihot esculenta HOM05D007528 ORTHO05D008503 4.4e-67 258.8 250 57.2
Potri.006G025200 Populus trichocarpa HOM05D007528 ORTHO05D008503 4.8e-66 255.4 261 53.6
Cpa.g.sc33.188 Carica papaya HOM05D007528 ORTHO05D008503 6.3e-66 255.0 188 67.0
Lalb_Chr22g0358311 Lupinus albus HOM05D007528 ORTHO05D008503 6.3e-66 255.0 193 63.7
Dinv14550 Davidia involucrata HOM05D007528 ORTHO05D008503 1.1e-65 254.2 192 65.1
Sabra06G0018500 Salix brachista HOM05D007528 ORTHO05D008503 4.1e-65 252.3 261 51.0
QL11p009983 Quercus lobata HOM05D007528 ORTHO05D008503 5.3e-65 251.9 258 55.4
MBI13_g02396_MAGBIO Magnolia biondii HOM05D007528 ORTHO05D008503 1.2e-64 250.8 193 64.8
SalBow6G5858 Salvia bowleyana HOM05D007528 ORTHO05D008503 3.5e-64 249.2 223 56.5
arahy.Tifrunner.gnm1.ann1.ARK2IX Arachis hypogaea HOM05D007528 ORTHO05D008503 4.5e-64 248.8 192 65.1
Eucgr.A02169 Eucalyptus grandis HOM05D007528 ORTHO05D008503 5.9e-64 248.4 231 58.0
RcHm_v2.0_Chr3g0495771 Rosa chinensis HOM05D007528 ORTHO05D008503 5.0e-63 245.4 237 56.5
Glyma.19G123400 Glycine max HOM05D007528 ORTHO05D008503 6.5e-63 245.0 180 65.6
PGR042G1749 Punica granatum HOM05D007528 ORTHO05D008503 6.5e-63 245.0 254 55.9
SalBow6G5282 Salvia bowleyana HOM05D007528 ORTHO05D008503 6.5e-63 245.0 249 52.6
FAN28G2175 Fragaria x ananassa HOM05D007528 ORTHO05D008503 1.1e-62 244.2 238 57.1
MSTRG.19743 Avicennia marina HOM05D007528 ORTHO05D008503 1.5e-62 243.8 263 49.8
PGSC0003DMG400019757 Solanum tuberosum HOM05D007528 ORTHO05D008503 1.9e-62 243.4 210 56.2
CANSAT21G0864 Cannabis sativa HOM05D007528 ORTHO05D008503 2.5e-62 243.0 254 53.5
Duzib093G0275 Durio zibethinus HOM05D007528 ORTHO05D008503 2.5e-62 243.0 208 58.7
FvH4_1g29750 Fragaria vesca HOM05D007528 ORTHO05D008503 2.5e-62 243.0 236 56.8
Medtr7g088210 Medicago truncatula HOM05D007528 ORTHO05D008503 2.5e-62 243.0 181 64.6
GSVIVG01025860001 Vitis vinifera HOM05D007528 ORTHO05D008503 4.2e-62 242.3 191 60.7
arahy.Tifrunner.gnm1.ann1.ZMQ31P Arachis hypogaea HOM05D007528 ORTHO05D008503 5.5e-62 241.9 183 63.9
Oeu032951.1 Olea europaea HOM05D007528 ORTHO05D008503 5.5e-62 241.9 195 60.0
Phvul.001G109000 Phaseolus vulgaris HOM05D007528 ORTHO05D008503 5.5e-62 241.9 193 62.7
Ciclev10012580m.g Citrus clementina HOM05D007528 ORTHO05D008503 7.2e-62 241.5 250 54.8
Cc06_g21080 Coffea canephora HOM05D007528 ORTHO05D008503 9.4e-62 241.1 248 52.4
CsaV3_3G039560 Cucumis sativus L. HOM05D007528 ORTHO05D008503 9.4e-62 241.1 247 54.3
FAN26G0883 Fragaria x ananassa HOM05D007528 ORTHO05D008503 9.4e-62 241.1 236 56.8
PSO729G0248 Papaver somniferum HOM05D007528 ORTHO05D008503 1.6e-61 240.4 194 60.3
Atru.chr8.936 Acer truncatum HOM05D007528 ORTHO05D008503 2.7e-61 239.6 267 51.7
MD12G1013500 Malus domestica HOM05D007528 ORTHO05D008503 2.7e-61 239.6 256 55.5
EL10Ac5g11614 Beta vulgaris HOM05D007528 ORTHO05D008503 6.1e-61 238.4 207 56.5
Nitab4.5_0000382g0060 Nicotiana tabacum HOM05D007528 ORTHO05D008503 6.1e-61 238.4 245 52.2
vmacro12911 Vaccinium macrocarpon HOM05D007528 ORTHO05D008503 6.1e-61 238.4 221 57.0
TWI63G0885 Tripterygium wilfordii HOM05D007528 ORTHO05D008503 1.0e-60 237.7 255 51.0
Aqoxy2G00067 Aquilegia oxysepala HOM05D007528 ORTHO05D008503 1.4e-60 237.3 247 51.8
Peaxi162Scf00183g00712 Petunia axillaris HOM05D007528 ORTHO05D008503 2.3e-60 236.5 256 53.1
ClCG10G016790 Citrullus lanatus HOM05D007528 ORTHO05D008503 3.0e-60 236.1 248 52.4
COL.COLO4_08087 Corchorus olitorius HOM05D007528 ORTHO05D008503 3.0e-60 236.1 257 51.8
Haze_09241 Corylus avellana HOM05D007528 ORTHO05D006305 4.0e-60 235.7 207 58.5
Gorai.002G231000 Gossypium raimondii HOM05D007528 ORTHO05D008503 5.2e-60 235.3 254 52.0
Thecc.05G128400 Theobroma cacao HOM05D007528 ORTHO05D008503 5.2e-60 235.3 232 56.5
CSS0027135 Camellia sinensis var. sinensis HOM05D007528 ORTHO05D008503 6.8e-60 235.0 228 53.9
Ca_08340_v3 Cicer arietinum L. HOM05D007528 ORTHO05D008503 6.8e-60 235.0 208 58.2
Nn7g37298 Nelumbo nucifera HOM05D007528 ORTHO05D008503 6.8e-60 235.0 191 61.3
DCAR_013508 Daucus carota HOM05D007528 ORTHO05D008503 8.8e-60 234.6 247 52.6
Gohir.D01G187600 Gossypium hirsutum HOM05D007528 ORTHO05D008503 8.8e-60 234.6 254 51.6
Lj1g0006388 Lotus japonicus HOM05D007528 ORTHO05D008503 8.8e-60 234.6 252 52.0
CDE04G0261 Ceratophyllum demersum HOM05D007528 ORTHO05D008503 1.5e-59 233.8 197 60.4
Solyc03g044630.2 Solanum lycopersicum HOM05D007528 ORTHO05D008503 1.5e-59 233.8 259 51.0
Psat3g082960 Pisum sativum HOM05D007528 ORTHO05D008503 2.0e-59 233.4 246 52.0
TPR.G23704 Trifolium pratense HOM05D007528 ORTHO05D008503 2.0e-59 233.4 256 51.6
BcaC02g12850 Brassica carinata HOM05D007528 ORTHO05D008503 4.4e-59 232.3 168 76.2
Gohir.A01G197400 Gossypium hirsutum HOM05D007528 ORTHO05D008503 1.7e-58 230.3 254 51.2
Migut.J01598 Erythranthe guttata HOM05D007528 ORTHO05D008503 4.8e-58 228.8 250 51.6
Sed0015046 Sechium edule HOM05D007528 ORTHO05D008503 8.3e-58 228.0 244 53.7
ECA236G1579 Erigeron canadensis HOM05D007528 ORTHO05D008503 1.4e-57 227.3 188 60.1
ATR0307G122 Amborella trichopoda HOM05D007528 ORTHO05D008503 7.0e-57 224.9 197 56.3
Lsat_1_v5_gn_8_83941 Lactuca sativa HOM05D007528 ORTHO05D008503 7.0e-57 224.9 176 60.8
Lj2A414T28 Lonicera japonica HOM05D007528 ORTHO05D008503 3.5e-56 222.6 248 50.4
Prupe.7G017900 Prunus persica HOM05D007528 ORTHO05D008503 4.5e-56 222.2 143 72.0
HanXRQChr04g0125621 Helianthus annuus HOM05D007528 ORTHO05D008503 2.3e-55 219.9 246 51.2
Os11g0130200 Oryza sativa ssp. japonica HOM05D007528 ORTHO05D008503 1.5e-51 207.2 199 54.3
Zm00001eb195960 Zea mays HOM05D007528 ORTHO05D008503 7.5e-51 204.9 198 53.0
SEGI_20851 Sequoiadendron giganteum HOM05D007528 ORTHO05D008503 4.9e-50 202.2 239 49.8
AagrBONN_evm.TU.Sc2ySwM_344.4238 Anthoceros agrestis HOM05D007528 ORTHO05D008503 8.6e-47 191.4 215 47.9
CiPaw.13G169300 Carya illinoinensis HOM05D007528 ORTHO05D008503 7.3e-46 188.3 151 62.9
Pp3c21_6860 Physcomitrium patens HOM05D007528 ORTHO05D008503 1.2e-45 187.6 199 49.7
Mapoly0168s0009 Marchantia polymorpha HOM05D007528 ORTHO05D008503 6.1e-45 185.3 215 47.4
SMO266G0100 Selaginella moellendorffii HOM05D007528 ORTHO05D008503 1.2e-43 181.0 186 50.0
Rhsim10G0151800 Rhododendron simsii HOM05D007528 ORTHO05D008503 1.5e-43 180.6 137 64.2
CBR_g37627 Chara braunii HOM05D007528 ORTHO05D008503 3.2e-41 172.9 187 48.1
FAN19G0638 Fragaria x ananassa HOM05D007528 ORTHO05D008503 1.5e-35 154.1 129 62.0
CAN.G1129.33 Capsicum annuum HOM05D007528 ORTHO05D008503 8.6e-31 138.3 124 55.6
Sopen03g008910 Solanum pennellii HOM05D007528 ORTHO05D008503 2.1e-29 133.7 124 52.4
unitig_21.g20663 Utricularia gibba HOM05D007528 ORTHO05D008503 4.6e-24 115.9 213 38.5
Glyma.03G119100 Glycine max HOM05D007528 ORTHO05D008503 7.8e-24 115.2 124 49.2
Glyma.03G119000 Glycine max HOM05D007528 ORTHO05D008503 3.9e-15 86.3 127 44.1
VMungo1383G2363 Vigna mungo HOM05D007528 ORTHO05D008503 8.7e-15 85.1 51 74.5
SEGI_18622 Sequoiadendron giganteum HOM05D007528 ORTHO05D008503 2.6e-11 73.6 114 43.0
FAN23G1305 Fragaria x ananassa HOM05D007528 ORTHO05D029410 4.2e-09 66.2 81 48.1
Hma1.2p1_1327F.1_g275910 Hydrangea macrophylla HOM05D007528 ORTHO05D008503 1.0e-07 61.6 73 52.1


User provided reference genes

Program Settings