Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G38970 Arabidopsis lyrata HOM05D009157 ORTHO05D031338 2.1e-45 185.3 89 100.0
AL872U10020 Arabidopsis lyrata HOM05D009157 ORTHO05D031338 4.8e-42 174.1 85 97.6
AT2G41997 Arabidopsis thaliana HOM05D009157 ORTHO05D031338 8.0e-29 130.2 85 70.6
CARHR136110 Cardamine hirsuta HOM05D009157 ORTHO05D011114 7.7e-16 87.0 85 57.6
C05p19330 Brassica napus HOM05D009157 ORTHO05D011114 1.1e-14 83.2 85 52.9
BolC5t30635H Brassica oleracea HOM05D009157 ORTHO05D011114 1.9e-14 82.4 83 51.8
AT2G40995 Arabidopsis thaliana HOM05D009157 ORTHO05D011114 2.5e-14 82.0 85 50.6
BraA06t24784Z Brassica rapa HOM05D009157 ORTHO05D011114 7.2e-14 80.5 85 50.6
AL872U10010 Arabidopsis lyrata HOM05D009157 ORTHO05D011114 2.8e-13 78.6 86 51.2
A06p16740 Brassica napus HOM05D009157 ORTHO05D011114 3.6e-13 78.2 83 50.6
Thhalv10016013m.g Eutrema salsugineum HOM05D009157 ORTHO05D011114 4.7e-13 77.8 88 50.0
BraA06t24782Z Brassica rapa HOM05D009157 ORTHO05D011114 8.0e-13 77.0 83 48.2
Carub.0005s0711 Capsella rubella HOM05D009157 ORTHO05D011114 2.3e-12 75.5 88 48.9
Carub.0003s2867 Capsella rubella HOM05D009157 ORTHO05D011114 3.0e-12 75.1 88 47.7
A06p16760 Brassica napus HOM05D009157 ORTHO05D011114 8.9e-12 73.6 85 45.9
BraA06t24778Z Brassica rapa HOM05D009157 ORTHO05D011114 1.3e-10 69.7 85 44.7
Thhalv10015663m.g Eutrema salsugineum HOM05D009157 ORTHO05D011114 7.0e-09 63.9 83 45.8
AL1G27870 Arabidopsis lyrata HOM05D009997 ORTHO05D013470 2.0e-08 62.4 84 34.5
Sp1g14050 Schrenkiella parvula HOM05D009997 ORTHO05D013470 5.9e-08 60.8 89 40.4
Carub.0004s2332 Capsella rubella HOM05D009157 ORTHO05D011114 7.8e-08 60.5 87 44.8
Carub.0007s3316 Capsella rubella HOM05D009997 ORTHO05D013470 7.8e-08 60.5 85 40.0
AT1G15757 Arabidopsis thaliana HOM05D009997 ORTHO05D013470 3.9e-07 58.2 84 34.5
BcaB03g14524 Brassica carinata HOM05D009997 ORTHO05D013470 8.6e-07 57.0 84 35.7
A02p11740 Brassica napus HOM05D009157 ORTHO05D011114 8.6e-07 57.0 85 41.2
BraA02t06239Z Brassica rapa HOM05D009157 ORTHO05D011114 8.6e-07 57.0 85 41.2
A09p26810 Brassica napus HOM05D009779 ORTHO05D013534 1.1e-06 56.6 89 40.4
BNapus_Darmor_BZH_scaffold_232p00090 Brassica napus HOM05D009157 ORTHO05D011114 1.1e-06 56.6 85 41.2
C02p19560 Brassica napus HOM05D009157 ORTHO05D011114 1.1e-06 56.6 85 41.2
BolC2t08093H Brassica oleracea HOM05D009157 ORTHO05D011114 1.1e-06 56.6 85 41.2
BraA09t38252Z Brassica rapa HOM05D009779 ORTHO05D013534 1.1e-06 56.6 89 40.4
Carub.0006s2664 Capsella rubella HOM05D009157 ORTHO05D011114 1.5e-06 56.2 83 36.1
BolC3t15237H Brassica oleracea HOM05D009779 ORTHO05D013534 1.9e-06 55.8 89 40.4
Carub.0001s1553 Capsella rubella HOM05D009997 ORTHO05D013470 3.3e-06 55.1 86 39.5
Thhalv10012291m.g Eutrema salsugineum HOM05D009997 ORTHO05D013470 4.3e-06 54.7 89 38.2
BraA07t29157Z Brassica rapa HOM05D009997 ORTHO05D011114 5.6e-06 54.3 85 38.8
Thhalv10015154m.g Eutrema salsugineum HOM05D009997 ORTHO05D013470 5.6e-06 54.3 89 40.4
BcaC07g41482 Brassica carinata HOM05D009997 ORTHO05D013470 9.5e-06 53.5 87 39.1
C08p44800 Brassica napus HOM05D009997 ORTHO05D013470 9.5e-06 53.5 87 39.1
BolC8t52025H Brassica oleracea HOM05D009997 ORTHO05D013470 9.5e-06 53.5 87 39.1


User provided reference genes

Program Settings