Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G37630 Arabidopsis lyrata HOM05D005941 ORTHO05D023652 5.6e-59 230.7 116 100.0
AL4G37620 Arabidopsis lyrata HOM05D005941 ORTHO05D007879 2.5e-30 135.6 125 66.4
BcaB03g14064 Brassica carinata HOM05D005941 ORTHO05D007879 2.4e-17 92.4 130 46.2
BcaC06g35147 Brassica carinata HOM05D005941 ORTHO05D007879 4.1e-17 91.7 129 48.1
BolC7t42451H Brassica oleracea HOM05D005941 ORTHO05D007879 4.1e-17 91.7 129 48.1
C07p19310 Brassica napus HOM05D005941 ORTHO05D007879 5.3e-17 91.3 129 48.1
A07p12860 Brassica napus HOM05D005941 ORTHO05D007879 1.2e-16 90.1 130 46.9
BcaC06g35151 Brassica carinata HOM05D005941 ORTHO05D007879 1.6e-16 89.7 130 46.9
BolC7t42445H Brassica oleracea HOM05D005941 ORTHO05D007879 1.6e-16 89.7 130 46.9
BcaB02g10128 Brassica carinata HOM05D005941 ORTHO05D007879 3.5e-16 88.6 96 47.9
CARHR134120 Cardamine hirsuta HOM05D005941 ORTHO05D007879 4.5e-16 88.2 117 48.7
BraA07t29061Z Brassica rapa HOM05D005941 ORTHO05D007879 5.9e-16 87.8 130 46.2
A06p37200 Brassica napus HOM05D005941 ORTHO05D007879 1.0e-15 87.0 125 48.0
BolC7t42414H Brassica oleracea HOM05D005941 ORTHO05D007879 1.0e-15 87.0 130 48.5
BraA06t26643Z Brassica rapa HOM05D005941 ORTHO05D007879 2.9e-15 85.5 129 46.5
BcaB03g14065 Brassica carinata HOM05D005941 ORTHO05D007879 3.8e-15 85.1 130 45.4
BcaB03g14061 Brassica carinata HOM05D005941 ORTHO05D007879 6.5e-15 84.3 77 59.7
C03p08500 Brassica napus HOM05D005941 ORTHO05D007879 6.5e-15 84.3 101 50.5
BolC3t13355H Brassica oleracea HOM05D005941 ORTHO05D007879 6.5e-15 84.3 101 50.5
C03p08630 Brassica napus HOM05D005941 ORTHO05D007879 8.5e-15 84.0 104 49.0
BolC3t13365H Brassica oleracea HOM05D005941 ORTHO05D007879 8.5e-15 84.0 104 49.0
A03p07450 Brassica napus HOM05D005941 ORTHO05D007879 2.5e-14 82.4 103 48.5
BraA03t10074Z Brassica rapa HOM05D005941 ORTHO05D007879 3.6e-13 78.6 86 51.2
AT2G43260 Arabidopsis thaliana HOM05D005941 ORTHO05D007879 4.7e-13 78.2 72 58.3
AL4G36610 Arabidopsis lyrata HOM05D005941 ORTHO05D007879 1.4e-12 76.6 119 47.1
BcaB06g28637 Brassica carinata HOM05D005941 ORTHO05D007879 1.4e-12 76.6 98 51.0
C04p62360 Brassica napus HOM05D005941 ORTHO05D007879 1.4e-12 76.6 98 50.0
BolC4t26593H Brassica oleracea HOM05D005941 ORTHO05D007879 1.4e-12 76.6 122 44.3
BolC4t27710H Brassica oleracea HOM05D005941 ORTHO05D007879 1.4e-12 76.6 98 51.0
CARHR138330 Cardamine hirsuta HOM05D005941 ORTHO05D007879 1.4e-12 76.6 62 58.1
AT2G42955 Arabidopsis thaliana HOM05D005941 ORTHO05D007879 3.0e-12 75.5 123 40.7
C04p04330 Brassica napus HOM05D005941 ORTHO05D007879 3.0e-12 75.5 85 48.2
BolC4t22069H Brassica oleracea HOM05D005941 ORTHO05D007879 3.0e-12 75.5 85 48.2
CARHR134960 Cardamine hirsuta HOM05D005941 ORTHO05D007879 1.2e-11 73.6 86 47.7
A05p03700 Brassica napus HOM05D005941 ORTHO05D007879 2.0e-11 72.8 85 44.7
BraA05t19357Z Brassica rapa HOM05D005941 ORTHO05D007879 2.0e-11 72.8 85 45.9
BcaC06g33593 Brassica carinata HOM05D005941 ORTHO05D007879 2.6e-11 72.4 115 41.7
BolC7t45422H Brassica oleracea HOM05D005941 ORTHO05D007879 2.6e-11 72.4 115 41.7
Carub.0004s2574 Capsella rubella HOM05D005941 ORTHO05D007879 2.6e-11 72.4 72 55.6
AL4G41930 Arabidopsis lyrata HOM05D005941 ORTHO05D007879 5.7e-11 71.2 71 54.9
A03p50720 Brassica napus HOM05D005941 ORTHO05D007879 5.7e-11 71.2 115 40.9
BraA03t14163Z Brassica rapa HOM05D005941 ORTHO05D007879 5.7e-11 71.2 115 40.9
CARHR130490 Cardamine hirsuta HOM05D005941 ORTHO05D007879 7.5e-11 70.9 91 49.5
C04p04430 Brassica napus HOM05D005941 ORTHO05D007879 1.3e-10 70.1 89 48.3
BolC4t22076H Brassica oleracea HOM05D005941 ORTHO05D007879 1.3e-10 70.1 89 48.3
Carub.0005s2945 Capsella rubella HOM05D005941 ORTHO05D007879 1.3e-10 70.1 137 41.6
AT2G30385 Arabidopsis thaliana HOM05D005941 ORTHO05D007879 1.7e-10 69.7 99 44.4
Carub.0007s2358 Capsella rubella HOM05D005941 ORTHO05D007879 1.7e-10 69.7 105 43.8
Thhalv10027244m.g Eutrema salsugineum HOM05D005941 ORTHO05D007879 1.7e-10 69.7 112 40.2
C04p04390 Brassica napus HOM05D005941 ORTHO05D007879 2.8e-10 68.9 89 46.1
BolC4t22072H Brassica oleracea HOM05D005941 ORTHO05D007879 2.8e-10 68.9 89 46.1
AL4G34310 Arabidopsis lyrata HOM05D005941 ORTHO05D007879 3.7e-10 68.6 133 42.9
AT2G30615 Arabidopsis thaliana HOM05D005941 ORTHO05D007879 3.7e-10 68.6 120 44.2
BcaNung06467 Brassica carinata HOM05D005941 ORTHO05D007879 3.7e-10 68.6 68 52.9
BcaC02g12406 Brassica carinata HOM05D005941 ORTHO05D007879 6.3e-10 67.8 78 48.7
CARHR130510 Cardamine hirsuta HOM05D005941 ORTHO05D007879 1.4e-09 66.6 77 50.6
AT4G17780 Arabidopsis thaliana HOM05D005941 ORTHO05D007879 1.8e-09 66.2 77 50.6
BcaNung04033 Brassica carinata HOM05D005941 ORTHO05D007879 1.8e-09 66.2 74 55.4
CARHR134100 Cardamine hirsuta HOM05D005941 ORTHO05D007879 1.8e-09 66.2 70 51.4
AT2G43440 Arabidopsis thaliana HOM05D005941 ORTHO05D007879 5.4e-09 64.7 67 53.7
AL4G41950 Arabidopsis lyrata HOM05D005941 ORTHO05D007879 9.1e-09 63.9 77 49.4
BolC4t28542H Brassica oleracea HOM05D005941 ORTHO05D007879 2.7e-08 62.4 83 47.0
AT2G43445 Arabidopsis thaliana HOM05D005941 ORTHO05D007879 5.9e-08 61.2 80 48.8
BcaC02g08826 Brassica carinata HOM05D005941 ORTHO05D007879 1.0e-07 60.5 91 50.5
A04p32700 Brassica napus HOM05D012296 ORTHO05D014409 1.0e-07 60.5 70 45.7
BcaC06g35173 Brassica carinata HOM05D005941 ORTHO05D007879 1.3e-07 60.1 87 43.7
Thhalv10001524m.g Eutrema salsugineum HOM05D005941 ORTHO05D007879 2.9e-07 58.9 77 42.9
BcaB06g29313 Brassica carinata HOM05D005941 ORTHO05D007879 3.8e-07 58.5 84 42.9
C05p07170 Brassica napus HOM05D005941 ORTHO05D007879 8.6e-07 57.4 73 42.5
BolC5t29472H Brassica oleracea HOM05D005941 ORTHO05D007879 1.1e-06 57.0 72 43.1
BcaB06g29309 Brassica carinata HOM05D005941 ORTHO05D023652 5.5e-06 54.7 64 50.0
BcaB06g29310 Brassica carinata HOM05D005941 ORTHO05D023652 5.5e-06 54.7 64 50.0
BcaC02g07183 Brassica carinata HOM05D005941 ORTHO05D023652 5.5e-06 54.7 64 50.0
BcaC02g07184 Brassica carinata HOM05D005941 ORTHO05D023652 5.5e-06 54.7 64 50.0


User provided reference genes

Program Settings