Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G35990 Arabidopsis lyrata HOM05D007159 ORTHO05D009068 4.2e-113 411.4 211 100.0
AT2G38695 Arabidopsis thaliana HOM05D007159 ORTHO05D009068 1.4e-92 343.2 215 84.7
Carub.0004s2069 Capsella rubella HOM05D007159 ORTHO05D009068 1.9e-92 342.8 215 84.2
Sp4g21050 Schrenkiella parvula HOM05D007159 ORTHO05D009068 4.4e-86 321.6 222 80.2
CARHR133370 Cardamine hirsuta HOM05D007159 ORTHO05D009068 2.5e-81 305.8 217 76.5
A03p21540 Brassica napus HOM05D007159 ORTHO05D009068 1.0e-74 283.9 213 73.7
C03p25530 Brassica napus HOM05D007159 ORTHO05D009068 3.0e-74 282.3 216 72.7
BraA03t11390Z Brassica rapa HOM05D007159 ORTHO05D009068 1.4e-68 263.5 211 69.2
Thhalv10017229m.g Eutrema salsugineum HOM05D007159 ORTHO05D009068 1.6e-67 260.0 159 85.5
BcaNung04831 Brassica carinata HOM05D007159 ORTHO05D009068 6.6e-66 254.6 177 78.5
BolC3t14940H Brassica oleracea HOM05D007159 ORTHO05D009068 2.5e-65 252.7 176 76.7
THA.LOC104824199 Tarenaya hassleriana HOM05D007159 ORTHO05D009068 4.5e-62 241.9 226 58.8
Aa31sc689G20 Aethionema arabicum HOM05D007159 ORTHO05D009068 1.7e-61 240.0 168 73.2
Aa31sc26G60 Aethionema arabicum HOM05D007159 ORTHO05D009068 1.9e-57 226.5 243 56.0
GSVIVG01004028001 Vitis vinifera HOM05D007159 ORTHO05D009068 7.6e-54 214.5 190 61.1
Ciclev10002366m.g Citrus clementina HOM05D007159 ORTHO05D009068 1.7e-53 213.4 173 63.6
Potri.003G190101 Populus trichocarpa HOM05D007159 ORTHO05D009068 1.7e-53 213.4 207 60.4
Duzib128G1689 Durio zibethinus HOM05D007159 ORTHO05D009068 8.4e-53 211.1 213 54.9
GSVIVG01012409001 Vitis vinifera HOM05D007159 ORTHO05D009068 8.4e-53 211.1 165 67.3
COL.COLO4_32863 Corchorus olitorius HOM05D007159 ORTHO05D009068 1.4e-52 210.3 140 72.1
GSVIVG01004020001 Vitis vinifera HOM05D007159 ORTHO05D009068 1.4e-52 210.3 165 66.7
MD02G1270600 Malus domestica HOM05D007159 ORTHO05D009068 3.2e-52 209.1 194 59.3
GSVIVG01012445001 Vitis vinifera HOM05D007159 ORTHO05D009068 3.2e-52 209.1 165 66.7
CiPaw.13G018000 Carya illinoinensis HOM05D007159 ORTHO05D009068 2.1e-51 206.5 139 71.9
Eucgr.G03186 Eucalyptus grandis HOM05D007159 ORTHO05D009068 2.1e-51 206.5 156 68.6
QL04p022349 Quercus lobata HOM05D007159 ORTHO05D009068 2.1e-51 206.5 157 68.8
Manes.11G009800 Manihot esculenta HOM05D007159 ORTHO05D009068 7.9e-51 204.5 210 59.0
Gohir.A10G191800 Gossypium hirsutum HOM05D007159 ORTHO05D009068 2.3e-50 203.0 177 61.6
RcHm_v2.0_Chr3g0462781 Rosa chinensis HOM05D007159 ORTHO05D009068 2.3e-50 203.0 197 56.9
Lj3g0023531 Lotus japonicus HOM05D007159 ORTHO05D009068 3.0e-50 202.6 169 63.9
Glyma.04G126100 Glycine max HOM05D007159 ORTHO05D009068 3.9e-50 202.2 194 55.7
arahy.Tifrunner.gnm1.ann1.XLH660 Arachis hypogaea HOM05D007159 ORTHO05D009068 6.7e-50 201.4 127 75.6
Thecc.10G133500 Theobroma cacao HOM05D007159 ORTHO05D009068 8.7e-50 201.1 217 53.0
Medtr3g011770 Medicago truncatula HOM05D007159 ORTHO05D009068 1.5e-49 200.3 165 64.8
PGSC0003DMG402002094 Solanum tuberosum HOM05D007159 ORTHO05D009068 3.3e-49 199.1 165 59.4
Hund06845 Selenicereus undatus HOM05D007159 ORTHO05D009068 5.7e-49 198.4 210 52.9
TPR.G30403 Trifolium pratense HOM05D007159 ORTHO05D009068 5.7e-49 198.4 170 63.5
PGR031G3393 Punica granatum HOM05D007159 ORTHO05D009068 9.6e-49 197.6 160 66.2
Actinidia35758 Actinidia chinensis HOM05D007159 ORTHO05D009068 1.3e-48 197.2 174 59.8
TWI63G1065 Tripterygium wilfordii HOM05D007159 ORTHO05D009068 1.3e-48 197.2 199 54.3
Gorai.011G223700 Gossypium raimondii HOM05D007159 ORTHO05D009068 1.6e-48 196.8 213 54.0
SalBow5G2583 Salvia bowleyana HOM05D007159 ORTHO05D009068 1.6e-48 196.8 177 59.3
Solyc06g061130.4 Solanum lycopersicum HOM05D007159 ORTHO05D009068 1.6e-48 196.8 165 59.4
Gohir.D10G199566 Gossypium hirsutum HOM05D007159 ORTHO05D009068 2.1e-48 196.4 124 76.6
PSO339G3610 Papaver somniferum HOM05D007159 ORTHO05D009068 2.1e-48 196.4 166 62.0
VMungo1080G1031 Vigna mungo HOM05D007159 ORTHO05D009068 6.2e-48 194.9 125 76.0
FvH4_6g11251 Fragaria vesca HOM05D007159 ORTHO05D009068 8.2e-48 194.5 159 64.8
FAN14G5227 Fragaria x ananassa HOM05D007159 ORTHO05D009068 8.2e-48 194.5 159 64.8
Lalb_Chr18g0048161 Lupinus albus HOM05D007159 ORTHO05D009068 8.2e-48 194.5 183 56.3
Phvul.005G013300 Phaseolus vulgaris HOM05D007159 ORTHO05D009068 8.2e-48 194.5 164 63.4
FAN02G0787 Fragaria x ananassa HOM05D007159 ORTHO05D009068 1.4e-47 193.7 205 54.6
Sopen06g021330 Solanum pennellii HOM05D007159 ORTHO05D009068 1.4e-47 193.7 165 58.8
FAN14G2984 Fragaria x ananassa HOM05D007159 ORTHO05D009068 4.1e-47 192.2 159 64.2
TAR623G0509 Trochodendron aralioides HOM05D007159 ORTHO05D009068 4.1e-47 192.2 244 49.6
Migut.B01174 Erythranthe guttata HOM05D007159 ORTHO05D009068 5.3e-47 191.8 166 62.0
Nn2g14588 Nelumbo nucifera HOM05D007159 ORTHO05D009068 6.9e-47 191.4 153 63.4
SGA_v2.0_scaffold141G35535 Striga asiatica HOM05D007159 ORTHO05D009068 9.0e-47 191.0 171 59.6
Cc00_g21840 Coffea canephora HOM05D007159 ORTHO05D009068 1.5e-46 190.3 173 57.2
ATR0598G156 Amborella trichopoda HOM05D007159 ORTHO05D009068 7.6e-46 188.0 170 58.8
MSTRG.20491 Avicennia marina HOM05D007159 ORTHO05D009068 1.3e-45 187.2 169 60.9
Psat5g224840 Pisum sativum HOM05D007159 ORTHO05D009068 1.3e-45 187.2 177 57.6
AUR62035525 Chenopodium quinoa HOM05D007159 ORTHO05D009068 2.2e-45 186.4 175 56.6
Zm00001eb314250 Zea mays HOM05D007159 ORTHO05D009068 2.9e-45 186.0 129 68.2
Aqoxy1G00016 Aquilegia oxysepala HOM05D007159 ORTHO05D009068 5.0e-45 185.3 192 53.1
Rhsim08G0052600 Rhododendron simsii HOM05D007159 ORTHO05D009068 1.1e-44 184.1 173 54.3
HPP92_004369 Vanilla planifolia HOM05D007159 ORTHO05D009068 1.9e-44 183.3 127 67.7
Nitab4.5_0000256g0440 Nicotiana tabacum HOM05D007159 ORTHO05D009068 3.2e-44 182.6 175 56.0
SEGI_36712 Sequoiadendron giganteum HOM05D007159 ORTHO05D009068 4.2e-44 182.2 137 65.0
Nitab4.5_0006066g0020 Nicotiana tabacum HOM05D007159 ORTHO05D009068 5.5e-44 181.8 125 68.0
EL10Ac4g08838 Beta vulgaris HOM05D007159 ORTHO05D009068 1.3e-42 177.2 193 51.8
ClCG11G012910 Citrullus lanatus HOM05D007159 ORTHO05D009068 3.0e-42 176.0 120 72.5
Lsat_1_v5_gn_7_31321 Lactuca sativa HOM05D007159 ORTHO05D009068 6.7e-42 174.9 160 55.0
AagrBONN_evm.TU.Sc2ySwM_344.1718 Anthoceros agrestis HOM05D007159 ORTHO05D009068 9.0e-39 164.5 143 55.2
CsaV3_5G029340 Cucumis sativus L. HOM05D007159 ORTHO05D009068 1.2e-38 164.1 151 59.6
Mapoly0102s0032 Marchantia polymorpha HOM05D007159 ORTHO05D009068 1.9e-36 156.8 123 60.2
SMO137G0134 Selaginella moellendorffii HOM05D007159 ORTHO05D009068 3.2e-36 156.0 124 60.5
ECA236G3649 Erigeron canadensis HOM05D007159 ORTHO05D009068 4.2e-36 155.6 147 55.8
HanXRQChr15g0480981 Helianthus annuus HOM05D007159 ORTHO05D009068 4.2e-36 155.6 99 70.7
Peaxi162Scf00615g00514 Petunia axillaris HOM05D007159 ORTHO05D009068 3.6e-35 152.5 92 79.3
Actinidia39400 Actinidia chinensis HOM05D007159 ORTHO05D009068 3.9e-34 149.1 85 82.4
arahy.Tifrunner.gnm1.ann1.T46YUH Arachis hypogaea HOM05D007159 ORTHO05D009068 3.9e-34 149.1 127 59.1
Dinv23933 Davidia involucrata HOM05D007159 ORTHO05D009068 2.0e-33 146.7 126 61.1
DCAR_001925 Daucus carota HOM05D007159 ORTHO05D009068 4.3e-33 145.6 121 60.3
Ah.06g191300 Amaranthus hybridus HOM05D007159 ORTHO05D009068 7.4e-33 144.8 196 45.9
Sc09g0004690 Simmondsia chinensis HOM05D007159 ORTHO05D009068 8.2e-32 141.4 93 75.3
GSVIVG01012423001 Vitis vinifera HOM05D007159 ORTHO05D009068 6.9e-31 138.3 83 81.9
Aa31sc19G60 Aethionema arabicum HOM05D007159 ORTHO05D009068 4.5e-30 135.6 80 81.2
AUR62041642 Chenopodium quinoa HOM05D007159 ORTHO05D009068 1.0e-29 134.4 121 58.7
MELO3C034053.2 Cucumis melo HOM05D007159 ORTHO05D009068 3.8e-29 132.5 98 71.4
CBR_g8263 Chara braunii HOM05D007159 ORTHO05D009068 5.0e-29 132.1 127 50.4
GSVIVG01012347001 Vitis vinifera HOM05D007159 ORTHO05D009068 6.5e-29 131.7 94 70.2
Prupe.2G049700 Prunus persica HOM05D007159 ORTHO05D009068 3.6e-27 125.9 146 49.3
FAN05G1155 Fragaria x ananassa HOM05D007159 ORTHO05D009068 3.0e-26 122.9 199 43.7
GSVIVG01012437001 Vitis vinifera HOM05D007159 ORTHO05D009068 8.8e-26 121.3 165 47.3
Oeu058665.1 Olea europaea HOM05D007159 ORTHO05D009068 4.4e-25 119.0 71 77.5
Sed0014969 Sechium edule HOM05D007159 ORTHO05D009068 1.3e-24 117.5 104 61.5
unitig_749.g13795 Utricularia gibba HOM05D007159 ORTHO05D009068 7.7e-22 108.2 80 66.2
QL04p022306 Quercus lobata HOM05D007159 ORTHO05D009068 1.9e-20 103.6 92 58.7
FAN09G0838 Fragaria x ananassa HOM05D007159 ORTHO05D009068 4.7e-19 99.0 205 38.0
Atru.chr12.1193 Acer truncatum HOM05D007159 ORTHO05D009068 1.1e-15 87.8 49 85.7
CANSAT78G1490 Cannabis sativa HOM05D007159 ORTHO05D009068 1.1e-15 87.8 128 43.0
Sed0016161 Sechium edule HOM05D007159 ORTHO05D009068 9.1e-15 84.7 67 64.2
Glyma.06G312500 Glycine max HOM05D007159 ORTHO05D009068 2.6e-14 83.2 64 64.1
PRCOL_00002415 Prasinoderma coloniale HOM05D007159 ORTHO05D009068 2.9e-13 79.7 120 40.0
Haze_02958 Corylus avellana HOM05D007159 ORTHO05D009068 9.4e-12 74.7 146 43.2
MCO13G186 Micromonas commoda HOM05D007159 ORTHO05D009068 1.6e-11 73.9 123 36.6
unitig_52.g17699 Utricularia gibba HOM05D009116 ORTHO05D011299 2.0e-09 67.0 117 32.5
Ciclev10012634m.g Citrus clementina HOM05D009116 ORTHO05D011299 5.7e-09 65.5 124 30.6
Os04g0600100 Oryza sativa ssp. japonica HOM05D009116 ORTHO05D011299 5.7e-09 65.5 118 30.5
MSTRG.26944 Avicennia marina HOM05D009116 ORTHO05D011299 9.8e-09 64.7 123 30.9
Oeu038114.2 Olea europaea HOM05D002675 ORTHO05D003322 9.8e-09 64.7 112 33.0
Rhsim03G0219300 Rhododendron simsii HOM05D009116 ORTHO05D011299 4.8e-08 62.4 154 29.9
Migut.F00112 Erythranthe guttata HOM05D009116 ORTHO05D011299 6.3e-08 62.0 181 25.4
Nitab4.5_0000115g0230 Nicotiana tabacum HOM05D009116 ORTHO05D011299 1.1e-07 61.2 124 31.5
Nitab4.5_0003012g0090 Nicotiana tabacum HOM05D009116 ORTHO05D011299 1.1e-07 61.2 124 32.3
Hund27206 Selenicereus undatus HOM05D009116 ORTHO05D011299 1.4e-07 60.8 148 29.7
PGR031G3920 Punica granatum HOM05D009116 ORTHO05D011299 1.8e-07 60.5 123 29.3
CDE02G3635 Ceratophyllum demersum HOM05D009116 ORTHO05D011299 2.4e-07 60.1 116 31.9
COL.COLO4_34141 Corchorus olitorius HOM05D009116 ORTHO05D011299 2.4e-07 60.1 179 26.3
EL10Ac1g00288 Beta vulgaris HOM05D009116 ORTHO05D011299 3.1e-07 59.7 124 30.6
CAN.G65.136 Capsicum annuum HOM05D009116 ORTHO05D011299 3.1e-07 59.7 124 30.6
PGSC0003DMG400027028 Solanum tuberosum HOM05D009116 ORTHO05D011299 3.1e-07 59.7 124 31.5
Mapoly0065s0044 Marchantia polymorpha HOM05D009116 ORTHO05D011299 5.4e-07 58.9 130 31.5
Eucgr.H00677 Eucalyptus grandis HOM05D009116 ORTHO05D011299 7.0e-07 58.5 177 27.7
Solyc06g072930.4 Solanum lycopersicum HOM05D009116 ORTHO05D011299 9.1e-07 58.2 124 30.6
QL04p022221 Quercus lobata HOM05D000002 ORTHO05D000001 2.0e-06 57.0 82 46.3
Nn1g02040 Nelumbo nucifera HOM05D009116 ORTHO05D011299 5.9e-06 55.5 114 28.9
AagrBONN_evm.TU.Sc2ySwM_368.2113 Anthoceros agrestis HOM05D009116 ORTHO05D011299 7.7e-06 55.1 117 29.1


User provided reference genes

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