Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G35960 Arabidopsis lyrata HOM05D006565 ORTHO05D008717 6.2e-177 624.0 313 100.0
AT2G38680 Arabidopsis thaliana HOM05D006565 ORTHO05D008717 1.1e-130 470.3 349 73.6
Carub.0004s2066 Capsella rubella HOM05D006565 ORTHO05D008717 1.1e-125 453.8 355 71.0
CARHR133350 Cardamine hirsuta HOM05D006565 ORTHO05D008717 7.7e-119 431.0 301 76.7
Thhalv10016992m.g Eutrema salsugineum HOM05D006565 ORTHO05D008717 3.0e-115 419.1 292 75.7
Sp4g21020 Schrenkiella parvula HOM05D006565 ORTHO05D008717 5.2e-115 418.3 351 65.8
A03p21520 Brassica napus HOM05D006565 ORTHO05D008717 2.2e-113 412.9 355 63.4
BraA03t11388Z Brassica rapa HOM05D006565 ORTHO05D008717 7.7e-103 377.9 335 62.4
BolC3t14938H Brassica oleracea HOM05D006565 ORTHO05D008717 1.3e-102 377.1 355 60.8
C03p25510 Brassica napus HOM05D006565 ORTHO05D008717 5.5e-101 371.7 304 65.8
RcHm_v2.0_Chr1g0332191 Rosa chinensis HOM05D006565 ORTHO05D008717 1.1e-96 357.5 289 63.3
THA.LOC104801973 Tarenaya hassleriana HOM05D006565 ORTHO05D008717 3.1e-96 355.9 303 64.4
TAR636G0179 Trochodendron aralioides HOM05D006565 ORTHO05D008717 9.1e-96 354.4 302 62.3
GSVIVG01034599001 Vitis vinifera HOM05D006565 ORTHO05D008717 1.6e-95 353.6 294 63.6
Atru.chr12.1084 Acer truncatum HOM05D006565 ORTHO05D008717 3.8e-94 349.0 297 62.3
Duzib114G0050 Durio zibethinus HOM05D006565 ORTHO05D008717 6.6e-94 348.2 291 61.9
Thecc.10G119100 Theobroma cacao HOM05D006565 ORTHO05D008717 1.9e-93 346.7 291 61.5
Prupe.2G073700 Prunus persica HOM05D006565 ORTHO05D008717 9.5e-93 344.4 294 60.2
Gorai.009G302300 Gossypium raimondii HOM05D006565 ORTHO05D008717 1.6e-92 343.6 289 62.6
Manes.10G059200 Manihot esculenta HOM05D006565 ORTHO05D008717 2.1e-92 343.2 293 60.8
Gohir.A05G286300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 4.7e-92 342.0 289 61.9
Gohir.D05G287300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 4.7e-92 342.0 289 62.3
Actinidia34736 Actinidia chinensis HOM05D006565 ORTHO05D008717 1.4e-91 340.5 291 62.9
QL04p048612 Quercus lobata HOM05D006565 ORTHO05D008717 1.4e-91 340.5 296 60.8
FvH4_7g05460 Fragaria vesca HOM05D006565 ORTHO05D008717 2.3e-91 339.7 287 60.3
MD07G1062700 Malus domestica HOM05D006565 ORTHO05D008717 3.0e-91 339.3 298 58.7
arahy.Tifrunner.gnm1.ann1.51BCJ8 Arachis hypogaea HOM05D006565 ORTHO05D008717 4.0e-91 339.0 292 60.3
Rhsim09G0140500 Rhododendron simsii HOM05D006565 ORTHO05D008717 5.2e-91 338.6 290 62.8
arahy.Tifrunner.gnm1.ann1.V0HLME Arachis hypogaea HOM05D006565 ORTHO05D008717 6.8e-91 338.2 292 60.3
Ciclev10015763m.g Citrus clementina HOM05D006565 ORTHO05D008717 6.8e-91 338.2 290 60.7
Ca_10426_v3 Cicer arietinum L. HOM05D006565 ORTHO05D008717 1.2e-90 337.4 310 59.7
Nn2g14368 Nelumbo nucifera HOM05D006565 ORTHO05D008717 2.0e-90 336.7 299 58.2
ECA233G2794 Erigeron canadensis HOM05D006565 ORTHO05D008717 3.4e-90 335.9 302 60.3
Potri.010G243900 Populus trichocarpa HOM05D006565 ORTHO05D008717 4.4e-90 335.5 292 60.3
CiPaw.14G036000 Carya illinoinensis HOM05D006565 ORTHO05D008717 5.7e-90 335.1 296 59.8
Lj5g0019410 Lotus japonicus HOM05D006565 ORTHO05D008717 5.7e-90 335.1 296 60.1
TPR.G10259 Trifolium pratense HOM05D006565 ORTHO05D008717 7.5e-90 334.7 311 58.2
TWI15G0448 Tripterygium wilfordii HOM05D006565 ORTHO05D008717 9.8e-90 334.3 293 59.4
Cc02_g09290 Coffea canephora HOM05D006565 ORTHO05D008717 1.3e-89 334.0 293 59.7
COL.COLO4_10008 Corchorus olitorius HOM05D006565 ORTHO05D008717 1.3e-89 334.0 291 60.5
Glyma.20G195000 Glycine max HOM05D006565 ORTHO05D008717 1.3e-89 334.0 316 57.3
Lalb_Chr06g0169851 Lupinus albus HOM05D006565 ORTHO05D008717 1.7e-89 333.6 292 59.9
Aqoxy1G00616 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 8.3e-89 331.3 291 60.5
CANSAT56G1291 Cannabis sativa HOM05D006565 ORTHO05D008717 5.4e-88 328.6 295 59.0
vmacro10331 Vaccinium macrocarpon HOM05D006565 ORTHO05D008717 5.4e-88 328.6 304 60.2
HanXRQChr08g0217341 Helianthus annuus HOM05D006565 ORTHO05D008717 9.2e-88 327.8 295 59.7
Medtr1g090380 Medicago truncatula HOM05D006565 ORTHO05D008717 9.2e-88 327.8 292 60.3
Psat6g171600 Pisum sativum HOM05D006565 ORTHO05D008717 1.6e-87 327.0 290 60.3
Eucgr.G02667 Eucalyptus grandis HOM05D006565 ORTHO05D008717 7.8e-87 324.7 292 57.5
Peaxi162Scf00120g01317 Petunia axillaris HOM05D006565 ORTHO05D008717 7.8e-87 324.7 329 55.3
SGA_v2.0_scaffold90G27708 Striga asiatica HOM05D006565 ORTHO05D008717 7.8e-87 324.7 298 59.4
Dinv03812 Davidia involucrata HOM05D006565 ORTHO05D008717 1.3e-86 323.9 293 58.0
Sabra10G0190700 Salix brachista HOM05D006565 ORTHO05D008717 1.3e-86 323.9 334 53.9
Migut.F00832 Erythranthe guttata HOM05D006565 ORTHO05D008717 2.3e-86 323.2 290 60.0
VMungo0720G0186 Vigna mungo HOM05D006565 ORTHO05D008717 2.3e-86 323.2 312 56.1
Os03g0648900 Oryza sativa ssp. japonica HOM05D006565 ORTHO05D008717 5.0e-86 322.0 298 57.4
ClCG05G021990 Citrullus lanatus HOM05D006565 ORTHO05D008717 8.6e-86 321.2 298 57.0
Sc07g0003130 Simmondsia chinensis HOM05D006565 ORTHO05D008717 1.1e-85 320.9 291 58.4
AUR62034160 Chenopodium quinoa HOM05D006565 ORTHO05D008717 2.5e-85 319.7 310 55.2
CAN.G143.52 Capsicum annuum HOM05D006565 ORTHO05D008717 3.3e-85 319.3 288 60.1
RhsimUnG0215000 Rhododendron simsii HOM05D006565 ORTHO05D008717 4.3e-85 318.9 349 53.0
MELO3C012330.2 Cucumis melo HOM05D006565 ORTHO05D008717 5.6e-85 318.5 295 57.3
PSO339G2240 Papaver somniferum HOM05D006565 ORTHO05D008717 5.6e-85 318.5 301 56.5
Solyc11g006420.2 Solanum lycopersicum HOM05D006565 ORTHO05D008717 9.5e-85 317.8 293 58.7
Zm00001eb218510 Zea mays HOM05D006565 ORTHO05D008717 9.5e-85 317.8 298 56.7
HanXRQChr02g0049321 Helianthus annuus HOM05D006565 ORTHO05D008717 1.2e-84 317.4 288 58.3
AUR62014278 Chenopodium quinoa HOM05D006565 ORTHO05D008717 1.6e-84 317.0 310 54.5
CsaV3_5G035170 Cucumis sativus L. HOM05D006565 ORTHO05D008717 2.1e-84 316.6 295 56.9
Lj3A921T38 Lonicera japonica HOM05D006565 ORTHO05D008717 2.8e-84 316.2 280 60.0
Sopen11g002320 Solanum pennellii HOM05D006565 ORTHO05D008717 2.8e-84 316.2 293 58.0
HPP92_013938 Vanilla planifolia HOM05D006565 ORTHO05D008717 2.8e-84 316.2 293 56.7
Sed0004638 Sechium edule HOM05D006565 ORTHO05D008717 1.4e-83 313.9 288 56.6
Dinv06042 Davidia involucrata HOM05D006565 ORTHO05D008717 8.9e-83 311.2 274 60.9
PGSC0003DMG400014108 Solanum tuberosum HOM05D006565 ORTHO05D008717 3.4e-82 309.3 293 57.0
Lsat_1_v5_gn_8_21800 Lactuca sativa HOM05D006565 ORTHO05D008717 7.5e-82 308.1 298 56.4
MSTRG.9025 Avicennia marina HOM05D006565 ORTHO05D008717 3.7e-81 305.8 291 57.0
EL10Ac4g08734 Beta vulgaris HOM05D006565 ORTHO05D008717 8.3e-81 304.7 287 56.1
ATR0697G221 Amborella trichopoda HOM05D006565 ORTHO05D008717 1.4e-80 303.9 276 58.3
Phvul.007G137100 Phaseolus vulgaris HOM05D006565 ORTHO05D008717 1.2e-76 290.8 294 54.1
FAN01G3085 Fragaria x ananassa HOM05D006565 ORTHO05D008717 4.7e-76 288.9 272 57.4
SEGI_36612 Sequoiadendron giganteum HOM05D006565 ORTHO05D008717 5.2e-75 285.4 272 57.0
SMO367G1082 Selaginella moellendorffii HOM05D006565 ORTHO05D008717 2.6e-74 283.1 295 51.2
Pp3c1_24570 Physcomitrium patens HOM05D006565 ORTHO05D008717 1.3e-73 280.8 308 51.3
Hund06810 Selenicereus undatus HOM05D006565 ORTHO05D008717 1.3e-73 280.8 310 51.6
Prupe.2G074100 Prunus persica HOM05D006565 ORTHO05D008717 2.2e-73 280.0 185 72.4
Nitab4.5_0001781g0210 Nicotiana tabacum HOM05D006565 ORTHO05D008717 3.7e-73 279.3 253 60.1
AagrBONN_evm.TU.Sc2ySwM_228.2835 Anthoceros agrestis HOM05D006565 ORTHO05D008717 6.4e-73 278.5 291 51.9
PGSC0003DMG400001988 Solanum tuberosum HOM05D006565 ORTHO05D008717 1.1e-72 277.7 205 65.4
FAN06G1903 Fragaria x ananassa HOM05D006565 ORTHO05D008717 9.2e-72 274.6 274 55.8
CDE06G1733 Ceratophyllum demersum HOM05D006565 ORTHO05D008717 1.5e-69 267.3 272 54.8
Mapoly0082s0075 Marchantia polymorpha HOM05D006565 ORTHO05D008717 4.7e-68 262.3 273 49.8
Oeu009252.1 Olea europaea HOM05D006565 ORTHO05D008717 4.7e-68 262.3 299 51.8
FAN10G4168 Fragaria x ananassa HOM05D006565 ORTHO05D008717 4.0e-67 259.2 299 51.2
FAN21G0259 Fragaria x ananassa HOM05D006565 ORTHO05D008717 2.9e-65 253.1 269 54.6
MBI05_g36782_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 1.5e-58 230.7 161 68.3
CBR_g36829 Chara braunii HOM05D006565 ORTHO05D001468 9.0e-51 204.9 393 34.9
FvH4_1g27810 Fragaria vesca HOM05D006565 ORTHO05D008717 4.9e-49 199.1 251 48.6
Potri.008G015201 Populus trichocarpa HOM05D006565 ORTHO05D008717 4.2e-48 196.1 143 66.4
Nitab4.5_0016854g0010 Nicotiana tabacum HOM05D006565 ORTHO05D008717 1.8e-43 180.6 184 55.4
FAN10G3234 Fragaria x ananassa HOM05D006565 ORTHO05D008717 9.3e-40 168.3 250 42.4
FAN10G0629 Fragaria x ananassa HOM05D006565 ORTHO05D008717 3.3e-37 159.8 182 50.5
FAN03G2487 Fragaria x ananassa HOM05D006565 ORTHO05D008717 5.6e-37 159.1 182 50.5
Hma1.2p1_0098F.1_g048200 Hydrangea macrophylla HOM05D006565 ORTHO05D008717 6.9e-35 152.1 109 65.1
Haze_03436 Corylus avellana HOM05D006565 ORTHO05D008717 1.2e-34 151.4 251 41.8
Sabra13G0091500 Salix brachista HOM05D006565 ORTHO05D008717 3.9e-30 136.3 152 51.3
Lj3A922G55 Lonicera japonica HOM05D006565 ORTHO05D008717 1.9e-29 134.0 90 70.0
Lj3A922G54 Lonicera japonica HOM05D006565 ORTHO05D008717 9.6e-29 131.7 151 50.3
Cpa.g.sc33.128 Carica papaya HOM05D006565 ORTHO05D008717 2.9e-25 120.2 83 68.7
PSO384G3661 Papaver somniferum HOM05D006565 ORTHO05D008717 2.8e-20 103.6 142 46.5
Aqoxy6G01578 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 7.2e-16 89.0 124 46.8
RhsimUnG0214900 Rhododendron simsii HOM05D006565 ORTHO05D008717 9.4e-16 88.6 77 57.1
Glyma.10G195001 Glycine max HOM05D006565 ORTHO05D008717 1.6e-15 87.8 117 45.3
CSS0049814 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 7.4e-13 79.0 58 67.2
MBI08_g05402_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 5.3e-11 72.8 57 63.2
MBI15_g31580_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D011977 6.9e-11 72.4 61 59.0
Aqoxy6G01581 Aquilegia oxysepala HOM05D006565 ORTHO05D000596 1.2e-10 71.6 51 68.6
Psat7g239080 Pisum sativum HOM05D005767 ORTHO05D006785 2.1e-07 60.8 104 38.5
Cpa.g.sc33.129 Carica papaya HOM05D006565 ORTHO05D008717 1.4e-06 58.2 46 60.9
COL.COLO4_26864 Corchorus olitorius HOM05D002341 ORTHO05D003165 6.7e-06 55.8 40 67.5


User provided reference genes

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