Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G33710 Arabidopsis lyrata HOM05D005959 ORTHO05D007263 3.9e-143 511.5 274 100.0
AT2G37330 Arabidopsis thaliana HOM05D005959 ORTHO05D007263 2.9e-138 495.4 274 96.4
Carub.0004s1924 Capsella rubella HOM05D005959 ORTHO05D007263 3.8e-138 495.0 274 96.4
CARHR132260 Cardamine hirsuta HOM05D005959 ORTHO05D007263 1.6e-133 479.6 274 94.2
Sp4g19650 Schrenkiella parvula HOM05D005959 ORTHO05D007263 1.1e-132 476.9 272 93.4
Thhalv10017068m.g Eutrema salsugineum HOM05D005959 ORTHO05D007263 4.1e-132 474.9 272 92.6
BcaC02g07517 Brassica carinata HOM05D005959 ORTHO05D007263 3.2e-129 465.3 273 91.2
A04p28510 Brassica napus HOM05D005959 ORTHO05D007263 3.2e-129 465.3 273 91.6
BolC4t28086H Brassica oleracea HOM05D005959 ORTHO05D007263 3.2e-129 465.3 273 91.2
BraA04t18329Z Brassica rapa HOM05D005959 ORTHO05D007263 3.2e-129 465.3 273 91.6
C04p65830 Brassica napus HOM05D005959 ORTHO05D007263 9.4e-129 463.8 273 91.2
BcaC02g11852 Brassica carinata HOM05D005959 ORTHO05D007263 1.2e-128 463.4 273 91.2
BraA05t19827Z Brassica rapa HOM05D005959 ORTHO05D007263 1.2e-128 463.4 273 91.2
A05p08590 Brassica napus HOM05D005959 ORTHO05D007263 1.6e-128 463.0 273 90.8
C04p10680 Brassica napus HOM05D005959 ORTHO05D007263 3.6e-128 461.8 271 91.9
BolC4t22661H Brassica oleracea HOM05D005959 ORTHO05D007263 3.6e-128 461.8 271 91.9
BcaB02g09288 Brassica carinata HOM05D005959 ORTHO05D007263 1.0e-122 443.7 273 87.2
Gorai.009G422000 Gossypium raimondii HOM05D005959 ORTHO05D007263 6.1e-120 434.5 264 85.6
Gohir.D04G117100 Gossypium hirsutum HOM05D005959 ORTHO05D007263 1.8e-119 433.0 264 85.2
BcaB06g28984 Brassica carinata HOM05D005959 ORTHO05D007263 2.3e-119 432.6 251 92.0
Aa31LG5G22670 Aethionema arabicum HOM05D005959 ORTHO05D007263 3.3e-118 428.7 253 89.3
Thecc.05G049500 Theobroma cacao HOM05D005959 ORTHO05D007263 7.4e-118 427.6 264 84.1
Duzib106G1538 Durio zibethinus HOM05D005959 ORTHO05D007263 2.2e-117 426.0 264 83.7
Aa31LG5G22650 Aethionema arabicum HOM05D005959 ORTHO05D007263 3.7e-117 425.2 264 84.1
Duzib093G0581 Durio zibethinus HOM05D005959 ORTHO05D007263 7.0e-116 421.0 264 82.6
Duzib128G1635 Durio zibethinus HOM05D005959 ORTHO05D007263 1.2e-115 420.2 264 82.6
Migut.L01643 Erythranthe guttata HOM05D005959 ORTHO05D007263 1.6e-115 419.9 261 83.1
Manes.08G000700 Manihot esculenta HOM05D005959 ORTHO05D007263 2.0e-115 419.5 264 81.8
Cfa017467 Carpinus fangiana HOM05D005959 ORTHO05D007263 2.6e-115 419.1 264 83.0
Potri.016G082100 Populus trichocarpa HOM05D005959 ORTHO05D007263 4.5e-115 418.3 264 81.4
Lj3A975G71 Lonicera japonica HOM05D005959 ORTHO05D007263 5.9e-115 417.9 264 81.4
Oeu026074.1 Olea europaea HOM05D005959 ORTHO05D007263 5.9e-115 417.9 261 82.0
Ciclev10012473m.g Citrus clementina HOM05D005959 ORTHO05D007263 7.7e-115 417.5 264 82.2
Potri.006G215700 Populus trichocarpa HOM05D005959 ORTHO05D007263 7.7e-115 417.5 280 77.9
THA.LOC104823437 Tarenaya hassleriana HOM05D005959 ORTHO05D007263 7.7e-115 417.5 274 78.8
Peaxi162Scf00009g00079 Petunia axillaris HOM05D005959 ORTHO05D007263 1.0e-114 417.2 264 81.8
Rhsim05G0184400 Rhododendron simsii HOM05D005959 ORTHO05D007263 1.0e-114 417.2 264 82.2
Aa31LG5G22660 Aethionema arabicum HOM05D005959 ORTHO05D007263 1.3e-114 416.8 274 79.2
FAN09G4388 Fragaria x ananassa HOM05D005959 ORTHO05D007263 2.9e-114 415.6 264 81.8
FAN02G2849 Fragaria x ananassa HOM05D005959 ORTHO05D007263 3.8e-114 415.2 264 82.2
Cc06_g03270 Coffea canephora HOM05D005959 ORTHO05D007263 5.0e-114 414.8 264 81.8
Haze_20691 Corylus avellana HOM05D005959 ORTHO05D007263 5.0e-114 414.8 284 77.5
PGSC0003DMG400017610 Solanum tuberosum HOM05D005959 ORTHO05D007263 1.1e-113 413.7 264 81.8
FAN05G1034 Fragaria x ananassa HOM05D005959 ORTHO05D007263 1.5e-113 413.3 264 81.4
Glyma.10G047100 Glycine max HOM05D005959 ORTHO05D007263 1.5e-113 413.3 261 80.8
Solyc10g085950.2 Solanum lycopersicum HOM05D005959 ORTHO05D007263 1.5e-113 413.3 264 81.8
FAN14G3394 Fragaria x ananassa HOM05D005959 ORTHO05D007263 2.5e-113 412.5 264 81.1
PGR004G1166 Punica granatum HOM05D005959 ORTHO05D007263 3.2e-113 412.1 262 82.8
QL07p045958 Quercus lobata HOM05D005959 ORTHO05D007263 3.2e-113 412.1 262 81.7
RcHm_v2.0_Chr3g0468051 Rosa chinensis HOM05D005959 ORTHO05D007263 3.2e-113 412.1 264 81.1
MSTRG.26742 Avicennia marina HOM05D005959 ORTHO05D007263 4.2e-113 411.8 264 81.4
Nitab4.5_0000725g0200 Nicotiana tabacum HOM05D005959 ORTHO05D007263 4.2e-113 411.8 264 80.3
TWI74G1319 Tripterygium wilfordii HOM05D005959 ORTHO05D007263 4.2e-113 411.8 261 83.1
Atru.chr8.2507 Acer truncatum HOM05D005959 ORTHO05D007263 7.2e-113 411.0 264 80.3
SGA_v2.0_scaffold94G28648 Striga asiatica HOM05D005959 ORTHO05D007263 7.2e-113 411.0 261 82.0
Hma1.2p1_0111F.1_g053440 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 9.4e-113 410.6 264 81.1
unitig_578.g16043 Utricularia gibba HOM05D005959 ORTHO05D007263 1.6e-112 409.8 264 79.9
Prupe.6G245600 Prunus persica HOM05D005959 ORTHO05D007263 2.1e-112 409.5 264 81.1
Hund12071 Selenicereus undatus HOM05D005959 ORTHO05D007263 6.1e-112 407.9 270 78.5
MD12G1131100 Malus domestica HOM05D005959 ORTHO05D007263 1.4e-111 406.8 261 81.2
Ca_08807_v3 Cicer arietinum L. HOM05D005959 ORTHO05D007263 6.7e-111 404.4 262 80.9
TAR623G1105 Trochodendron aralioides HOM05D005959 ORTHO05D007263 6.7e-111 404.4 264 80.3
EL10Ac7g17275 Beta vulgaris HOM05D005959 ORTHO05D007263 1.2e-110 403.7 261 80.8
Psat0s1952g0120 Pisum sativum HOM05D005959 ORTHO05D007263 1.2e-110 403.7 262 80.5
ATR0594G178 Amborella trichopoda HOM05D005959 ORTHO05D007263 1.5e-110 403.3 270 78.9
Eucgr.K03183 Eucalyptus grandis HOM05D005959 ORTHO05D007263 1.5e-110 403.3 276 76.4
FvH4_6g14820 Fragaria vesca HOM05D005959 ORTHO05D007263 2.6e-110 402.5 255 82.4
MD04G1110300 Malus domestica HOM05D005959 ORTHO05D007263 3.3e-110 402.1 264 79.5
TPR.G21452 Trifolium pratense HOM05D005959 ORTHO05D007263 3.3e-110 402.1 262 79.8
Lj1g0020453 Lotus japonicus HOM05D005959 ORTHO05D007263 4.4e-110 401.7 262 79.8
arahy.Tifrunner.gnm1.ann1.R87Y2D Arachis hypogaea HOM05D005959 ORTHO05D007263 5.7e-110 401.4 266 78.6
Sopen10g035320 Solanum pennellii HOM05D005959 ORTHO05D007263 5.7e-110 401.4 253 83.0
Aqoxy2G00899 Aquilegia oxysepala HOM05D005959 ORTHO05D007263 9.7e-110 400.6 257 80.5
CSS0020892 Camellia sinensis var. sinensis HOM05D005959 ORTHO05D007263 1.3e-109 400.2 264 78.0
Sc01g0003780 Simmondsia chinensis HOM05D005959 ORTHO05D007263 1.7e-109 399.8 262 78.6
Lsat_1_v5_gn_6_33160 Lactuca sativa HOM05D005959 ORTHO05D007263 2.2e-109 399.4 260 78.8
CANSAT80G1914 Cannabis sativa HOM05D005959 ORTHO05D007263 4.8e-109 398.3 260 80.0
Phvul.001G172900 Phaseolus vulgaris HOM05D005959 ORTHO05D007263 4.8e-109 398.3 262 76.7
Ah.15g091970 Amaranthus hybridus HOM05D005959 ORTHO05D007263 6.3e-109 397.9 264 79.2
arahy.Tifrunner.gnm1.ann1.T45XFJ Arachis hypogaea HOM05D005959 ORTHO05D007263 6.3e-109 397.9 266 78.2
HanXRQChr13g0399331 Helianthus annuus HOM05D005959 ORTHO05D007263 6.3e-109 397.9 260 78.5
Glyma.03G175800 Glycine max HOM05D005959 ORTHO05D007263 8.2e-109 397.5 262 77.1
Medtr7g100160 Medicago truncatula HOM05D005959 ORTHO05D007263 1.4e-108 396.7 262 79.4
CDE07G0433 Ceratophyllum demersum HOM05D005959 ORTHO05D007263 2.4e-108 396.0 277 74.4
DCAR_020866 Daucus carota HOM05D005959 ORTHO05D007263 2.4e-108 396.0 264 78.0
Lalb_Chr25g0289351 Lupinus albus HOM05D005959 ORTHO05D007263 4.1e-108 395.2 262 76.3
Lj2A103T72 Lonicera japonica HOM05D005959 ORTHO05D007263 5.3e-108 394.8 259 78.8
MBI14_g34528_MAGBIO Magnolia biondii HOM05D005959 ORTHO05D007263 7.0e-108 394.4 252 82.1
CAN.G687.19 Capsicum annuum HOM05D005959 ORTHO05D007263 1.0e-106 390.6 241 83.4
ECA233G2168 Erigeron canadensis HOM05D005959 ORTHO05D007263 1.0e-106 390.6 250 80.4
CsaV3_3G035240 Cucumis sativus L. HOM05D005959 ORTHO05D007263 1.3e-106 390.2 262 76.7
Sabra16G0089800 Salix brachista HOM05D005959 ORTHO05D007263 2.9e-106 389.0 280 74.3
MELO3C009294.2 Cucumis melo HOM05D005959 ORTHO05D007263 3.8e-106 388.7 262 76.3
Gohir.A04G077900 Gossypium hirsutum HOM05D005959 ORTHO05D007263 1.1e-105 387.1 285 74.7
Sed0012545 Sechium edule HOM05D005959 ORTHO05D007263 1.9e-105 386.3 262 76.3
PSO339G1263 Papaver somniferum HOM05D005959 ORTHO05D007263 2.5e-105 386.0 259 77.2
vmacro20093 Vaccinium macrocarpon HOM05D005959 ORTHO05D007263 2.1e-104 382.9 286 73.8
PSO384G3658 Papaver somniferum HOM05D005959 ORTHO05D007263 6.1e-104 381.3 259 76.1
Lalb_Chr20g0113031 Lupinus albus HOM05D005959 ORTHO05D007263 1.8e-103 379.8 261 74.3
HPP92_021201 Vanilla planifolia HOM05D005959 ORTHO05D007263 2.3e-103 379.4 268 72.4
GSVIVG01025576001 Vitis vinifera HOM05D005959 ORTHO05D007263 7.5e-102 374.4 225 85.8
Eucgr.A01210 Eucalyptus grandis HOM05D005959 ORTHO05D007263 4.8e-101 371.7 257 76.3
Os05g0119000 Oryza sativa ssp. japonica HOM05D005959 ORTHO05D007263 1.8e-100 369.8 257 74.3
SEGI_41460 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 3.1e-100 369.0 265 73.2
CiPaw.09G185300 Carya illinoinensis HOM05D005959 ORTHO05D007263 4.1e-100 368.6 225 84.4
Hma1.2p1_0111F.1_g053390 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 7.7e-99 364.4 264 69.7
Cpa.g.sc114.24 Carica papaya HOM05D005959 ORTHO05D007263 2.3e-98 362.8 237 79.3
Hma1.2p1_0111F.1_g053380 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 4.7e-96 355.1 264 68.6
Mapoly0099s0026 Marchantia polymorpha HOM05D005959 ORTHO05D007263 8.8e-95 350.9 257 70.8
AUR62041007 Chenopodium quinoa HOM05D005959 ORTHO05D007263 3.7e-93 345.5 264 72.0
Pp3c20_6820 Physcomitrium patens HOM05D005959 ORTHO05D007263 9.2e-92 340.9 256 69.1
AagrBONN_evm.TU.Sc2ySwM_344.2577 Anthoceros agrestis HOM05D005959 ORTHO05D007263 3.3e-89 332.4 252 66.3
COL.COLO4_10311 Corchorus olitorius HOM05D005959 ORTHO05D007263 2.0e-86 323.2 264 67.8
SMO271G0174 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 4.4e-86 322.0 253 65.2
Dinv35677 Davidia involucrata HOM05D005959 ORTHO05D007263 1.0e-82 310.8 212 77.4
SEGI_29713 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 3.0e-82 309.3 256 65.6
Actinidia05285 Actinidia chinensis HOM05D005959 ORTHO05D007263 1.1e-65 254.2 177 74.0
CBR_g49882 Chara braunii HOM05D000019 ORTHO05D000048 5.6e-65 251.9 258 52.3
Nitab4.5_0002073g0040 Nicotiana tabacum HOM05D005959 ORTHO05D007263 1.3e-61 240.7 264 55.3
Nn2g12822 Nelumbo nucifera HOM05D005959 ORTHO05D007263 4.9e-61 238.8 160 78.1
ClCG10G020740 Citrullus lanatus HOM05D005959 ORTHO05D007263 5.4e-60 235.3 152 78.9
Actinidia11237 Actinidia chinensis HOM05D005959 ORTHO05D007263 2.1e-56 223.4 154 79.2
SMO364G0860 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 6.0e-51 205.3 237 45.1
Actinidia19734 Actinidia chinensis HOM05D005959 ORTHO05D007263 2.5e-49 199.9 264 49.6
CBR_g3295 Chara braunii HOM05D005959 ORTHO05D007263 2.9e-45 186.4 250 41.2
AagrBONN_evm.TU.Sc2ySwM_344.2052 Anthoceros agrestis HOM05D005959 ORTHO05D007263 5.3e-39 165.6 233 42.1
CDE04G1398 Ceratophyllum demersum HOM05D004061 ORTHO05D004693 4.3e-33 146.0 98 71.4
Actinidia13264 Actinidia chinensis HOM05D005959 ORTHO05D007263 2.1e-32 143.7 96 79.2
AagrBONN_evm.TU.Sc2ySwM_344.389 Anthoceros agrestis HOM05D005959 ORTHO05D007263 9.0e-31 138.3 239 35.6
Nn5g28122 Nelumbo nucifera HOM05D005959 ORTHO05D007263 5.5e-28 129.0 77 84.4
MD08G1090300 Malus domestica HOM05D005959 ORTHO05D007263 1.0e-26 124.8 119 59.7
Cre16.g673000 Chlamydomonas reinhardtii HOM05D005959 ORTHO05D007263 1.9e-25 120.6 236 35.6
Nn1g07598 Nelumbo nucifera HOM05D005959 ORTHO05D007263 1.9e-25 120.6 75 80.0
TAR629G2669 Trochodendron aralioides HOM05D002023 ORTHO05D002049 1.0e-21 108.2 100 59.0
Oeu004323.1 Olea europaea HOM05D005959 ORTHO05D007263 2.2e-08 63.9 42 73.8


User provided reference genes

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