Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G33400 Arabidopsis lyrata HOM05D007309 ORTHO05D015909 4.0e-179 631.3 325 100.0
Carub.0004s1897 Capsella rubella HOM05D007309 ORTHO05D015909 4.2e-59 232.6 376 41.5
AL4G33320 Arabidopsis lyrata HOM05D007309 ORTHO05D015909 1.0e-44 184.9 351 39.9
AL4G34290 Arabidopsis lyrata HOM05D007309 ORTHO05D015909 1.5e-37 161.0 326 37.7
Carub.0004s1446 Capsella rubella HOM05D007309 ORTHO05D015909 1.5e-37 161.0 335 35.8
AL4G34490 Arabidopsis lyrata HOM05D007309 ORTHO05D015909 2.0e-37 160.6 339 37.8
Carub.0004s1451 Capsella rubella HOM05D007309 ORTHO05D015909 5.9e-37 159.1 335 35.5
BolC2t06135H Brassica oleracea HOM05D007309 ORTHO05D010099 6.3e-15 85.9 357 25.2
BcaC03g12956 Brassica carinata HOM05D007309 ORTHO05D010099 8.2e-15 85.5 357 25.2
C02p01790 Brassica napus HOM05D007309 ORTHO05D010099 8.2e-15 85.5 357 25.2
BcaB05g21772 Brassica carinata HOM05D007309 ORTHO05D010099 5.3e-14 82.8 353 27.2
BcaB02g08395 Brassica carinata HOM05D010965 ORTHO05D016023 1.6e-13 81.3 324 26.2
BraA02t04794Z Brassica rapa HOM05D007309 ORTHO05D010099 1.6e-13 81.3 363 27.3
BcaB05g21792 Brassica carinata HOM05D007309 ORTHO05D010099 2.0e-13 80.9 363 25.9
BraA02t04799Z Brassica rapa HOM05D007309 ORTHO05D010099 7.7e-13 79.0 350 26.6
BcaB05g21775 Brassica carinata HOM05D007309 ORTHO05D010099 1.7e-12 77.8 367 24.3
BraA04t16224Z Brassica rapa HOM05D010965 ORTHO05D016023 2.2e-12 77.4 328 26.5
CARHR172830 Cardamine hirsuta HOM05D001456 ORTHO05D011865 2.9e-12 77.0 130 39.2
AL5G13790 Arabidopsis lyrata HOM05D007309 ORTHO05D014840 3.8e-12 76.6 165 37.6
BcaC03g12986 Brassica carinata HOM05D007309 ORTHO05D010099 3.8e-12 76.6 314 26.4
C02p01800 Brassica napus HOM05D007309 ORTHO05D010099 3.8e-12 76.6 375 25.3
AL4G19150 Arabidopsis lyrata HOM05D007309 ORTHO05D014840 5.0e-12 76.3 165 37.6
AL9U11090 Arabidopsis lyrata HOM05D007309 ORTHO05D014840 5.0e-12 76.3 165 37.6
C02p01340 Brassica napus HOM05D007309 ORTHO05D010099 5.0e-12 76.3 315 26.3
BcaC03g12963 Brassica carinata HOM05D007309 ORTHO05D010099 6.5e-12 75.9 352 27.3
C02p01480 Brassica napus HOM05D007309 ORTHO05D010099 6.5e-12 75.9 353 26.3
A04p04180 Brassica napus HOM05D010965 ORTHO05D024278 2.5e-11 73.9 324 24.7
C02p01780 Brassica napus HOM05D007309 ORTHO05D010099 2.5e-11 73.9 336 27.7
BcaC03g12955 Brassica carinata HOM05D007309 ORTHO05D010099 3.2e-11 73.6 326 26.1
C02p01750 Brassica napus HOM05D007309 ORTHO05D010099 3.2e-11 73.6 348 25.6
AL4G34570 Arabidopsis lyrata HOM05D007309 ORTHO05D015909 4.2e-11 73.2 96 42.7
BcaC03g12957 Brassica carinata HOM05D007309 ORTHO05D010099 1.2e-10 71.6 343 27.1
Carub.0006s2385 Capsella rubella HOM05D001456 ORTHO05D019698 2.1e-10 70.9 129 30.2
BolC2t06164H Brassica oleracea HOM05D007309 ORTHO05D021684 2.7e-10 70.5 347 25.1
BraA04t16134Z Brassica rapa HOM05D010965 ORTHO05D024278 3.6e-10 70.1 322 24.8
BcaC03g17362 Brassica carinata HOM05D007309 ORTHO05D032575 4.7e-10 69.7 369 25.7
C02p53010 Brassica napus HOM05D007309 ORTHO05D032575 4.7e-10 69.7 369 25.7
BcaC03g13128 Brassica carinata HOM05D007309 ORTHO05D021684 8.0e-10 68.9 351 24.8
BcaB05g21785 Brassica carinata HOM05D007309 ORTHO05D010099 2.3e-09 67.4 294 26.9
BcaC02g09040 Brassica carinata HOM05D010965 ORTHO05D016023 2.3e-09 67.4 326 23.9
BcaC03g12970 Brassica carinata HOM05D007309 ORTHO05D010099 2.3e-09 67.4 342 25.1
A04p22460 Brassica napus HOM05D007309 ORTHO05D010099 2.3e-09 67.4 73 43.8
C02p02060 Brassica napus HOM05D007309 ORTHO05D021684 2.3e-09 67.4 351 23.4
BolC4t25347H Brassica oleracea HOM05D010965 ORTHO05D016023 2.3e-09 67.4 326 23.3
BcaB02g08393 Brassica carinata HOM05D010965 ORTHO05D016023 3.0e-09 67.0 328 23.5
BcaC03g12961 Brassica carinata HOM05D007309 ORTHO05D010099 4.0e-09 66.6 344 24.1
BolC2t06167H Brassica oleracea HOM05D007309 ORTHO05D021684 5.2e-09 66.2 351 24.5
C02p01630 Brassica napus HOM05D007309 ORTHO05D010099 1.5e-08 64.7 360 24.7
BolC2t06110H Brassica oleracea HOM05D007309 ORTHO05D010099 1.5e-08 64.7 347 25.6
BcaC02g09794 Brassica carinata HOM05D010965 ORTHO05D024278 2.0e-08 64.3 312 25.0
BcaC03g13124 Brassica carinata HOM05D007309 ORTHO05D021684 2.0e-08 64.3 351 24.5
C02p01710 Brassica napus HOM05D007309 ORTHO05D010099 3.3e-08 63.5 351 24.5
A04p22450 Brassica napus HOM05D000075 ORTHO05D014840 4.4e-08 63.2 150 30.7
AL8G43400 Arabidopsis lyrata HOM05D012545 ORTHO05D013730 5.7e-08 62.8 145 31.7
BolC2t06133H Brassica oleracea HOM05D007309 ORTHO05D021684 5.7e-08 62.8 349 24.6
BcaC03g12971 Brassica carinata HOM05D007309 ORTHO05D010099 7.5e-08 62.4 107 35.5
CARHR167770 Cardamine hirsuta HOM05D001456 ORTHO05D011781 7.5e-08 62.4 145 34.5
AL7G51710 Arabidopsis lyrata HOM05D001456 ORTHO05D012451 9.7e-08 62.0 153 30.1
BcaB05g21746 Brassica carinata HOM05D007309 ORTHO05D010099 9.7e-08 62.0 332 25.0
BcaC03g12960 Brassica carinata HOM05D007309 ORTHO05D010099 9.7e-08 62.0 348 24.7
C02p01720 Brassica napus HOM05D007309 ORTHO05D010099 1.7e-07 61.2 371 25.6
BraA09t38661Z Brassica rapa HOM05D007309 ORTHO05D010099 2.2e-07 60.8 73 39.7
CARHR274920 Cardamine hirsuta HOM05D001456 ORTHO05D002799 2.8e-07 60.5 142 31.0
BcaC05g26633 Brassica carinata HOM05D007309 ORTHO05D010099 3.7e-07 60.1 362 22.9
AL5G13820 Arabidopsis lyrata HOM05D007309 ORTHO05D010099 4.8e-07 59.7 104 35.6
BcaC02g08085 Brassica carinata HOM05D000075 ORTHO05D014840 1.1e-06 58.5 150 31.3
BraA10t45076Z Brassica rapa HOM05D001260 ORTHO05D002424 1.4e-06 58.2 148 29.1
C02p01380 Brassica napus HOM05D007309 ORTHO05D010099 1.8e-06 57.8 287 25.8
BolC2t06143H Brassica oleracea HOM05D007309 ORTHO05D010099 2.4e-06 57.4 83 39.8
AL5G41570 Arabidopsis lyrata HOM05D001456 ORTHO05D011865 3.1e-06 57.0 146 34.2
AL1G58410 Arabidopsis lyrata HOM05D021205 ORTHO05D010099 4.1e-06 56.6 126 35.7
Dinv30943 Davidia involucrata HOM05D001456 ORTHO05D002799 4.1e-06 56.6 136 30.1
Sp2g24420 Schrenkiella parvula HOM05D001456 ORTHO05D002799 4.1e-06 56.6 131 34.4
BcaC03g12964 Brassica carinata HOM05D007309 ORTHO05D010099 5.3e-06 56.2 156 28.2
AL5G20610 Arabidopsis lyrata HOM05D001456 ORTHO05D019698 7.0e-06 55.8 127 29.9
C02p01240 Brassica napus HOM05D007309 ORTHO05D010099 7.0e-06 55.8 169 31.4
Sabra13G0002500 Salix brachista HOM05D001456 ORTHO05D002799 7.0e-06 55.8 168 28.0


User provided reference genes

Program Settings