Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G33330 Arabidopsis lyrata HOM05D006384 ORTHO05D007917 5.5e-167 590.9 297 100.0
AT2G37020 Arabidopsis thaliana HOM05D006384 ORTHO05D007917 5.7e-156 554.3 310 91.6
Carub.0004s1888 Capsella rubella HOM05D006384 ORTHO05D007917 6.1e-150 534.3 308 90.3
Thhalv10016975m.g Eutrema salsugineum HOM05D006384 ORTHO05D007917 9.8e-148 526.9 312 88.1
CARHR131500 Cardamine hirsuta HOM05D006384 ORTHO05D007917 1.3e-139 500.0 309 84.1
Sp4g19300 Schrenkiella parvula HOM05D006384 ORTHO05D007917 4.9e-139 498.0 314 83.4
BcaC01g05625 Brassica carinata HOM05D006384 ORTHO05D007917 7.8e-137 490.7 305 85.2
C03p23970 Brassica napus HOM05D006384 ORTHO05D007917 2.3e-136 489.2 306 85.3
BolC3t14788H Brassica oleracea HOM05D006384 ORTHO05D007917 2.9e-136 488.8 305 85.2
BcaB01g03801 Brassica carinata HOM05D006384 ORTHO05D007917 1.9e-135 486.1 299 84.9
A03p20380 Brassica napus HOM05D006384 ORTHO05D007917 6.1e-134 481.1 304 84.2
BraA03t11282Z Brassica rapa HOM05D006384 ORTHO05D007917 6.1e-134 481.1 304 84.2
THA.LOC104823480 Tarenaya hassleriana HOM05D006384 ORTHO05D007917 2.0e-116 422.9 300 73.7
Duzib093G1098 Durio zibethinus HOM05D006384 ORTHO05D007917 7.1e-106 387.9 305 68.2
THA.LOC104806487 Tarenaya hassleriana HOM05D006384 ORTHO05D007917 1.2e-105 387.1 233 82.4
Aa31LG5G22260 Aethionema arabicum HOM05D006384 ORTHO05D007917 2.7e-105 386.0 240 82.9
Thecc.05G063500 Theobroma cacao HOM05D006384 ORTHO05D007917 4.6e-105 385.2 303 68.0
Haze_20571 Corylus avellana HOM05D006384 ORTHO05D007917 2.3e-104 382.9 306 65.4
TWI74G0201 Tripterygium wilfordii HOM05D006384 ORTHO05D007917 3.9e-104 382.1 302 67.2
Potri.006G126200 Populus trichocarpa HOM05D006384 ORTHO05D007917 1.6e-102 376.7 308 64.3
Gorai.009G415700 Gossypium raimondii HOM05D006384 ORTHO05D007917 2.1e-102 376.3 297 67.7
CiPaw.10G132500 Carya illinoinensis HOM05D006384 ORTHO05D007917 1.1e-101 374.0 295 68.1
Gohir.D04G111800 Gossypium hirsutum HOM05D006384 ORTHO05D007917 3.1e-101 372.5 297 67.0
Gohir.A04G072900 Gossypium hirsutum HOM05D006384 ORTHO05D007917 4.0e-101 372.1 297 67.3
FAN14G1974 Fragaria x ananassa HOM05D006384 ORTHO05D007917 1.2e-100 370.5 290 68.6
FAN14G4113 Fragaria x ananassa HOM05D006384 ORTHO05D007917 1.2e-100 370.5 290 68.6
QL07p044018 Quercus lobata HOM05D006384 ORTHO05D007917 1.5e-100 370.2 331 61.0
COL.COLO4_26986 Corchorus olitorius HOM05D006384 ORTHO05D001525 2.6e-100 369.4 241 75.1
FAN02G0742 Fragaria x ananassa HOM05D006384 ORTHO05D007917 5.8e-100 368.2 290 67.9
FAN09G1862 Fragaria x ananassa HOM05D006384 ORTHO05D007917 1.3e-99 367.1 290 67.6
Solyc10g086210.2 Solanum lycopersicum HOM05D006384 ORTHO05D007917 3.8e-99 365.5 304 65.1
Sopen10g035590 Solanum pennellii HOM05D006384 ORTHO05D007917 3.8e-99 365.5 304 65.1
arahy.Tifrunner.gnm1.ann1.TG2889 Arachis hypogaea HOM05D006384 ORTHO05D007917 8.4e-99 364.4 297 66.7
TAR369G0955 Trochodendron aralioides HOM05D006384 ORTHO05D007917 5.4e-98 361.7 294 61.9
Atru.chr8.1840 Acer truncatum HOM05D006384 ORTHO05D007917 9.3e-98 360.9 298 63.8
MD12G1115500 Malus domestica HOM05D006384 ORTHO05D007917 9.3e-98 360.9 297 66.0
Peaxi162Scf00488g00042 Petunia axillaris HOM05D006384 ORTHO05D007917 1.6e-97 360.1 239 74.9
arahy.Tifrunner.gnm1.ann1.FRB5VT Arachis hypogaea HOM05D006384 ORTHO05D007917 2.1e-97 359.8 298 66.4
CAN.G509.15 Capsicum annuum HOM05D006384 ORTHO05D007917 2.7e-97 359.4 305 63.3
RcHm_v2.0_Chr3g0469981 Rosa chinensis HOM05D006384 ORTHO05D007917 2.7e-97 359.4 293 66.9
Hma1.2p1_0205F.1_g087265 Hydrangea macrophylla HOM05D006384 ORTHO05D007917 7.8e-97 357.8 300 63.7
CsaV3_3G035870 Cucumis sativus L. HOM05D006384 ORTHO05D007917 1.0e-96 357.5 297 64.0
Glyma.19G182800 Glycine max HOM05D006384 ORTHO05D007917 8.7e-96 354.4 287 65.2
Prupe.6G234600 Prunus persica HOM05D006384 ORTHO05D007917 8.7e-96 354.4 293 64.8
Rhsim03G0093600 Rhododendron simsii HOM05D006384 ORTHO05D007917 8.7e-96 354.4 326 59.8
MELO3C009346.2 Cucumis melo HOM05D006384 ORTHO05D007917 1.5e-95 353.6 296 63.2
Cc06_g04070 Coffea canephora HOM05D006384 ORTHO05D007917 4.3e-95 352.1 307 61.2
Migut.L01690 Erythranthe guttata HOM05D006384 ORTHO05D007917 2.1e-94 349.7 277 65.0
SGA_v2.0_scaffold452G51820 Striga asiatica HOM05D006384 ORTHO05D007917 3.6e-94 349.0 298 63.4
GSVIVG01025711001 Vitis vinifera HOM05D006384 ORTHO05D007917 3.6e-94 349.0 214 77.6
ClCG10G020230 Citrullus lanatus HOM05D006384 ORTHO05D007917 4.8e-94 348.6 300 63.0
Nn2g11540 Nelumbo nucifera HOM05D006384 ORTHO05D007917 4.8e-94 348.6 296 62.5
SalBow5G1519 Salvia bowleyana HOM05D006384 ORTHO05D007917 6.2e-94 348.2 300 63.0
SalBow5G1643 Salvia bowleyana HOM05D006384 ORTHO05D007917 6.2e-94 348.2 300 63.0
PSO801G0099 Papaver somniferum HOM05D006384 ORTHO05D007917 5.3e-93 345.1 292 60.3
Lalb_Chr20g0112661 Lupinus albus HOM05D006384 ORTHO05D007917 6.9e-93 344.7 289 66.1
Lj1g0002515 Lotus japonicus HOM05D006384 ORTHO05D007917 9.0e-93 344.4 310 63.9
Lj2A115T51 Lonicera japonica HOM05D006384 ORTHO05D007917 1.5e-92 343.6 305 60.3
Ca_08852_v3 Cicer arietinum L. HOM05D006384 ORTHO05D007917 2.0e-92 343.2 253 69.2
PSO339G6114 Papaver somniferum HOM05D006384 ORTHO05D007917 4.5e-92 342.0 296 60.1
Eucgr.A01141 Eucalyptus grandis HOM05D006384 ORTHO05D007917 7.6e-92 341.3 290 62.1
Psat3g043320 Pisum sativum HOM05D006384 ORTHO05D007917 9.9e-92 340.9 260 68.1
Os10g0443200 Oryza sativa ssp. japonica HOM05D006384 ORTHO05D007917 1.3e-91 340.5 242 69.8
Lsat_1_v5_gn_1_52961 Lactuca sativa HOM05D006384 ORTHO05D007917 6.4e-91 338.2 308 59.7
HanXRQChr01g0027531 Helianthus annuus HOM05D006384 ORTHO05D007917 1.1e-90 337.4 273 63.7
Ah.15g092420 Amaranthus hybridus HOM05D006384 ORTHO05D007917 2.4e-90 336.3 290 59.7
Hund20279 Selenicereus undatus HOM05D006384 ORTHO05D007917 2.4e-90 336.3 324 59.3
MSTRG.10316 Avicennia marina HOM05D006384 ORTHO05D007917 3.2e-90 335.9 303 60.4
TPR.G9375 Trifolium pratense HOM05D006384 ORTHO05D007917 4.2e-90 335.5 286 63.6
AUR62040461 Chenopodium quinoa HOM05D006384 ORTHO05D007917 9.3e-90 334.3 222 73.0
Sc20g0005270 Simmondsia chinensis HOM05D006384 ORTHO05D007917 1.2e-89 334.0 233 72.1
Oeu016975.2 Olea europaea HOM05D006384 ORTHO05D007917 6.0e-89 331.6 255 66.7
Phvul.001G178300 Phaseolus vulgaris HOM05D006384 ORTHO05D007917 6.0e-89 331.6 291 62.2
Sed0012269 Sechium edule HOM05D006384 ORTHO05D007917 1.0e-88 330.9 297 61.3
ATR0680G046 Amborella trichopoda HOM05D006384 ORTHO05D007917 1.8e-88 330.1 221 71.5
ECA248G2568 Erigeron canadensis HOM05D006384 ORTHO05D007917 8.7e-88 327.8 269 61.3
Aqoxy2G01819 Aquilegia oxysepala HOM05D006384 ORTHO05D007917 1.5e-87 327.0 225 72.0
DCAR_009302 Daucus carota HOM05D006384 ORTHO05D007917 1.9e-87 326.6 221 70.6
Dinv37301 Davidia involucrata HOM05D006384 ORTHO05D007917 9.6e-87 324.3 289 61.9
CSS0039092 Camellia sinensis var. sinensis HOM05D006384 ORTHO05D007917 1.3e-86 323.9 202 78.7
VMungo1383G1856 Vigna mungo HOM05D006384 ORTHO05D007917 2.8e-86 322.8 217 73.3
CDE06G0314 Ceratophyllum demersum HOM05D006384 ORTHO05D007917 3.1e-85 319.3 211 70.1
Nitab4.5_0002130g0050 Nicotiana tabacum HOM05D006384 ORTHO05D007917 2.6e-84 316.2 316 56.3
VMungo1383G2663 Vigna mungo HOM05D006384 ORTHO05D007917 3.4e-84 315.8 212 74.1
Medtr7g101760 Medicago truncatula HOM05D006384 ORTHO05D007917 4.5e-84 315.5 308 58.4
Nitab4.5_0000754g0290 Nicotiana tabacum HOM05D006384 ORTHO05D007917 5.8e-84 315.1 321 56.4
CANSAT80G0575 Cannabis sativa HOM05D006384 ORTHO05D007917 4.9e-83 312.0 287 60.3
HPP92_025998 Vanilla planifolia HOM05D006384 ORTHO05D007917 1.4e-82 310.5 227 66.1
EL10Ac7g16562 Beta vulgaris HOM05D006384 ORTHO05D007917 1.2e-81 307.4 309 56.0
Actinidia40017 Actinidia chinensis HOM05D006384 ORTHO05D007917 3.1e-77 292.7 217 69.6
PGR004G0408 Punica granatum HOM05D006384 ORTHO05D007917 1.6e-70 270.4 240 60.4
SEGI_26624 Sequoiadendron giganteum HOM05D006384 ORTHO05D007917 4.8e-70 268.9 214 59.8
Mapoly0009s0045 Marchantia polymorpha HOM05D006384 ORTHO05D007917 8.5e-67 258.1 215 58.6
Sc20g0001670 Simmondsia chinensis HOM05D006384 ORTHO05D007917 3.9e-64 249.2 215 57.7
AagrBONN_evm.TU.Sc2ySwM_117.2066 Anthoceros agrestis HOM05D006384 ORTHO05D007917 1.1e-63 247.7 215 56.3
unitig_0.g684 Utricularia gibba HOM05D006384 ORTHO05D007917 5.5e-58 228.8 187 61.5
Manes.09G064200 Manihot esculenta HOM05D006384 ORTHO05D007917 6.1e-57 225.3 212 60.8
FvH4_6g16140 Fragaria vesca HOM05D006384 ORTHO05D007917 2.3e-56 223.4 218 60.1
Cpa.g.c35130 Carica papaya HOM05D006384 ORTHO05D007917 3.9e-56 222.6 175 65.7
CBR_g30715 Chara braunii HOM05D001230 ORTHO05D007917 7.0e-53 211.8 211 50.2
CBR_g45408 Chara braunii HOM05D006384 ORTHO05D007917 5.9e-52 208.8 214 50.9
TAR623G0498 Trochodendron aralioides HOM05D001475 ORTHO05D001525 1.7e-51 207.2 173 59.0
SMO197G0035 Selaginella moellendorffii HOM05D006384 ORTHO05D007917 6.5e-51 205.3 191 52.4
CSS0004677 Camellia sinensis var. sinensis HOM05D006384 ORTHO05D007917 1.2e-49 201.1 140 71.4
vmacro07280 Vaccinium macrocarpon HOM05D006384 ORTHO05D007917 4.7e-49 199.1 167 63.5
Ciclev10013845m.g Citrus clementina HOM05D006384 ORTHO05D007917 2.6e-44 183.3 132 67.4
CSS0019463 Camellia sinensis var. sinensis HOM05D006384 ORTHO05D007917 8.0e-41 171.8 153 61.4
AUR62041978 Chenopodium quinoa HOM05D006384 ORTHO05D007917 2.0e-39 167.2 121 66.1
PSO832G0438 Papaver somniferum HOM05D006384 ORTHO05D007917 7.5e-39 165.2 105 74.3
Ciclev10013192m.g Citrus clementina HOM05D006384 ORTHO05D007917 1.2e-33 147.9 99 72.7
CSS0008908 Camellia sinensis var. sinensis HOM05D006384 ORTHO05D007917 2.8e-30 136.7 83 81.9
CSS0018803 Camellia sinensis var. sinensis HOM05D006384 ORTHO05D007917 2.8e-30 136.7 83 81.9
Glyma.03G182200 Glycine max HOM05D006384 ORTHO05D007917 5.4e-21 105.9 115 52.2
Zm00001eb222550 Zea mays HOM05D006384 ORTHO05D007917 2.1e-17 94.0 123 48.0
Cfa026119 Carpinus fangiana HOM05D006384 ORTHO05D007917 6.8e-16 89.0 222 27.5
Cpa.g.sc2150.3 Carica papaya HOM05D006384 ORTHO05D007917 3.0e-11 73.6 62 66.1
PRCOL_00004570 Prasinoderma coloniale HOM05D006384 ORTHO05D007917 5.6e-10 69.3 131 29.0
DCAR_017395 Daucus carota HOM05D006384 ORTHO05D007917 1.2e-09 68.2 40 75.0
Cre12.g527850 Chlamydomonas reinhardtii HOM05D006384 ORTHO05D007917 1.2e-07 61.6 211 23.2
MELO3C032679.2 Cucumis melo HOM05D006384 ORTHO05D007917 2.0e-07 60.8 56 57.1
TAR374G1213 Trochodendron aralioides HOM05D000928 ORTHO05D000023 2.6e-07 60.5 48 56.2
MCO04G452 Micromonas commoda HOM05D006384 ORTHO05D007917 1.3e-06 58.2 216 23.1
DCAR_032298 Daucus carota HOM05D006384 ORTHO05D007917 4.9e-06 56.2 39 74.4
RcHm_v2.0_Chr4g0411411 Rosa chinensis HOM05D006384 ORTHO05D007917 4.9e-06 56.2 49 57.1


User provided reference genes

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