Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G33030 Arabidopsis lyrata HOM05D006897 ORTHO05D008825 3.3e-65 251.5 125 100.0
AT2G36835 Arabidopsis thaliana HOM05D006897 ORTHO05D008825 7.4e-65 250.4 125 99.2
Carub.0004s1868 Capsella rubella HOM05D006897 ORTHO05D008825 6.9e-63 243.8 125 96.8
Sp4g19090 Schrenkiella parvula HOM05D006897 ORTHO05D008825 1.7e-61 239.2 125 94.4
Thhalv10017426m.g Eutrema salsugineum HOM05D006897 ORTHO05D008825 8.5e-61 236.9 125 92.8
A05p09040 Brassica napus HOM05D006897 ORTHO05D008825 1.1e-60 236.5 125 92.8
BraA05t19865Z Brassica rapa HOM05D006897 ORTHO05D008825 1.1e-60 236.5 125 92.8
CARHR131290 Cardamine hirsuta HOM05D006897 ORTHO05D008825 7.2e-60 233.8 128 90.6
BcaC02g11805 Brassica carinata HOM05D006897 ORTHO05D008825 9.4e-60 233.4 126 92.9
C04p11190 Brassica napus HOM05D006897 ORTHO05D008825 9.4e-60 233.4 126 92.9
BolC4t22765H Brassica oleracea HOM05D006897 ORTHO05D008825 9.4e-60 233.4 126 92.9
BcaB02g09328 Brassica carinata HOM05D006897 ORTHO05D008825 1.6e-59 232.6 126 91.3
TWI74G0074 Tripterygium wilfordii HOM05D006897 ORTHO05D008825 2.7e-51 205.3 125 76.0
Aa31LG5G22050 Aethionema arabicum HOM05D006897 ORTHO05D008825 4.7e-51 204.5 108 89.8
Manes.08G012300 Manihot esculenta HOM05D006897 ORTHO05D008825 4.0e-50 201.4 125 73.6
Gohir.A11G323600 Gossypium hirsutum HOM05D006897 ORTHO05D008825 8.8e-50 200.3 125 73.6
Gohir.D11G342700 Gossypium hirsutum HOM05D006897 ORTHO05D008825 8.8e-50 200.3 125 73.6
Gorai.007G372800 Gossypium raimondii HOM05D006897 ORTHO05D008825 8.8e-50 200.3 125 73.6
Prupe.7G126900 Prunus persica HOM05D006897 ORTHO05D008825 2.0e-49 199.1 121 75.2
Potri.006G122200 Populus trichocarpa HOM05D006897 ORTHO05D008825 4.8e-48 194.5 127 68.5
COL.COLO4_26923 Corchorus olitorius HOM05D006897 ORTHO05D008825 8.2e-48 193.7 125 68.8
RcHm_v2.0_Chr3g0470611 Rosa chinensis HOM05D006897 ORTHO05D008825 3.1e-47 191.8 128 68.0
Cpa.g.sc92.100 Carica papaya HOM05D006897 ORTHO05D008825 4.1e-47 191.4 125 68.0
GSVIVG01033669001 Vitis vinifera HOM05D006897 ORTHO05D008825 4.1e-47 191.4 127 67.7
MD12G1108500 Malus domestica HOM05D006897 ORTHO05D008825 5.3e-47 191.0 127 69.3
Lsat_1_v5_gn_6_28260 Lactuca sativa HOM05D006897 ORTHO05D008825 9.1e-47 190.3 125 69.6
Atru.chr8.1762 Acer truncatum HOM05D006897 ORTHO05D008825 2.0e-46 189.1 121 68.6
MD04G1090000 Malus domestica HOM05D006897 ORTHO05D008825 2.7e-46 188.7 128 68.8
arahy.Tifrunner.gnm1.ann1.12U4ZA Arachis hypogaea HOM05D006897 ORTHO05D008825 3.5e-46 188.3 129 71.3
Cfa017644 Carpinus fangiana HOM05D006897 ORTHO05D008825 4.5e-46 188.0 128 68.0
Sabra06G0096400 Salix brachista HOM05D006897 ORTHO05D008825 1.3e-45 186.4 144 61.1
Sed0016332 Sechium edule HOM05D006897 ORTHO05D008825 1.3e-45 186.4 129 68.2
FAN09G4221 Fragaria x ananassa HOM05D006897 ORTHO05D008825 2.2e-45 185.7 127 67.7
Ca_08918_v3 Cicer arietinum L. HOM05D006897 ORTHO05D008825 2.9e-45 185.3 127 65.4
Sed0006529 Sechium edule HOM05D006897 ORTHO05D008825 2.9e-45 185.3 128 68.0
FvH4_6g16650 Fragaria vesca HOM05D006897 ORTHO05D008825 3.8e-45 184.9 127 66.1
FAN05G5588 Fragaria x ananassa HOM05D006897 ORTHO05D008825 5.0e-45 184.5 127 65.4
Ciclev10013772m.g Citrus clementina HOM05D006897 ORTHO05D008825 6.5e-45 184.1 127 66.1
FAN05G2962 Fragaria x ananassa HOM05D006897 ORTHO05D008825 6.5e-45 184.1 127 64.6
EL10Ac7g16667 Beta vulgaris HOM05D006897 ORTHO05D008825 8.5e-45 183.7 125 67.2
Cc06_g04460 Coffea canephora HOM05D006897 ORTHO05D008825 8.5e-45 183.7 127 63.8
Lj1g0004142 Lotus japonicus HOM05D006897 ORTHO05D008825 8.5e-45 183.7 131 67.9
FAN14G2109 Fragaria x ananassa HOM05D006897 ORTHO05D008825 1.1e-44 183.3 127 65.4
Sc02g0001520 Simmondsia chinensis HOM05D006897 ORTHO05D008825 1.1e-44 183.3 125 64.0
HanXRQChr13g0400941 Helianthus annuus HOM05D006897 ORTHO05D008825 1.5e-44 183.0 127 65.4
PGSC0003DMG400028283 Solanum tuberosum HOM05D006897 ORTHO05D008825 1.9e-44 182.6 122 68.0
Lalb_Chr01g0018621 Lupinus albus HOM05D006897 ORTHO05D008825 2.5e-44 182.2 130 66.9
Hund26628 Selenicereus undatus HOM05D006897 ORTHO05D008825 2.5e-44 182.2 125 65.6
Sopen10g033350 Solanum pennellii HOM05D006897 ORTHO05D008825 2.5e-44 182.2 122 67.2
Eucgr.A01649 Eucalyptus grandis HOM05D006897 ORTHO05D008825 3.2e-44 181.8 125 66.4
CSS0029455 Camellia sinensis var. sinensis HOM05D006897 ORTHO05D008825 7.2e-44 180.6 133 61.7
CiPaw.09G169900 Carya illinoinensis HOM05D006897 ORTHO05D008825 7.2e-44 180.6 128 66.4
Medtr7g102930 Medicago truncatula HOM05D006897 ORTHO05D008825 9.4e-44 180.3 121 66.1
TPR.G32809 Trifolium pratense HOM05D006897 ORTHO05D008825 1.2e-43 179.9 116 68.1
unitig_27.g25382 Utricularia gibba HOM05D006897 ORTHO05D008825 1.2e-43 179.9 124 64.5
ECA233G4308 Erigeron canadensis HOM05D000468 ORTHO05D000548 2.1e-43 179.1 127 66.1
Aqoxy1G01120 Aquilegia oxysepala HOM05D006897 ORTHO05D008825 2.7e-43 178.7 127 66.9
Dinv35807 Davidia involucrata HOM05D006897 ORTHO05D008825 3.6e-43 178.3 126 64.3
Phvul.001G180700 Phaseolus vulgaris HOM05D006897 ORTHO05D008825 6.1e-43 177.6 129 63.6
VMungo1383G3501 Vigna mungo HOM05D006897 ORTHO05D008825 6.1e-43 177.6 129 65.1
Glyma.19G185800 Glycine max HOM05D006897 ORTHO05D008825 8.0e-43 177.2 122 66.4
CsaV3_3G036130 Cucumis sativus L. HOM05D006897 ORTHO05D008825 1.0e-42 176.8 128 65.6
Nitab4.5_0009369g0010 Nicotiana tabacum HOM05D006897 ORTHO05D008825 1.8e-42 176.0 126 62.7
Psat3g039920 Pisum sativum HOM05D006897 ORTHO05D008825 2.3e-42 175.6 117 67.5
AUR62026928 Chenopodium quinoa HOM05D006897 ORTHO05D008825 6.8e-42 174.1 126 66.7
MBI04_g13674_MAGBIO Magnolia biondii HOM05D000468 ORTHO05D000548 6.8e-42 174.1 126 62.7
Nn2g13847 Nelumbo nucifera HOM05D006897 ORTHO05D008825 6.8e-42 174.1 120 64.2
AUR62041582 Chenopodium quinoa HOM05D006897 ORTHO05D008825 1.2e-41 173.3 126 67.5
Duzib093G0551 Durio zibethinus HOM05D006897 ORTHO05D008825 2.0e-41 172.6 125 61.6
Migut.J00586 Erythranthe guttata HOM05D006897 ORTHO05D008825 2.0e-41 172.6 125 61.6
TAR623G0762 Trochodendron aralioides HOM05D000468 ORTHO05D000548 2.0e-41 172.6 125 63.2
Nitab4.5_0002626g0030 Nicotiana tabacum HOM05D000468 ORTHO05D000548 3.4e-41 171.8 135 60.0
PSO339G3187 Papaver somniferum HOM05D006897 ORTHO05D008825 4.4e-41 171.4 127 61.4
PSO063G5108 Papaver somniferum HOM05D006897 ORTHO05D008825 5.7e-41 171.0 127 62.2
Nn6g35243 Nelumbo nucifera HOM05D006897 ORTHO05D008825 7.5e-41 170.6 124 61.3
CDE05G1066 Ceratophyllum demersum HOM05D006897 ORTHO05D008825 1.3e-40 169.9 126 61.1
HPP92_010447 Vanilla planifolia HOM05D006897 ORTHO05D008825 2.8e-40 168.7 120 62.5
ClCG10G019960 Citrullus lanatus HOM05D006897 ORTHO05D008825 6.3e-40 167.5 136 61.0
MSTRG.5772 Avicennia marina HOM05D006897 ORTHO05D008825 1.1e-39 166.8 126 57.9
CDE02G4617 Ceratophyllum demersum HOM05D006897 ORTHO05D008825 1.1e-39 166.8 118 61.9
Nitab4.5_0000063g0200 Nicotiana tabacum HOM05D006897 ORTHO05D008825 1.8e-39 166.0 121 62.8
QL07p042737 Quercus lobata HOM05D006897 ORTHO05D008825 2.4e-39 165.6 170 51.8
Solyc10g083910.3 Solanum lycopersicum HOM05D006897 ORTHO05D008825 4.1e-39 164.9 105 68.6
SGA_v2.0_scaffold40G15485 Striga asiatica HOM05D006897 ORTHO05D008825 4.1e-39 164.9 126 60.3
Medtr0050s0130 Medicago truncatula HOM05D006897 ORTHO05D008825 7.0e-39 164.1 122 61.5
MELO3C009375.2 Cucumis melo HOM05D006897 ORTHO05D008825 9.1e-39 163.7 144 58.3
Oeu041483.1 Olea europaea HOM05D006897 ORTHO05D008825 1.9e-36 156.0 109 60.6
HPP92_010241 Vanilla planifolia HOM05D006897 ORTHO05D008825 2.1e-35 152.5 104 64.4
Nitab4.5_0000527g0030 Nicotiana tabacum HOM05D006897 ORTHO05D008825 2.3e-34 149.1 109 59.6
Gohir.D04G109600 Gossypium hirsutum HOM05D006897 ORTHO05D008825 4.4e-33 144.8 109 57.8
Glyma.03G185300 Glycine max HOM05D006897 ORTHO05D008825 9.8e-33 143.7 105 61.0
Thecc.05G070500 Theobroma cacao HOM05D006897 ORTHO05D008825 3.7e-32 141.7 125 55.2
Zm00001eb369960 Zea mays HOM05D006897 ORTHO05D008825 1.8e-31 139.4 123 52.0
Gorai.009G413700 Gossypium raimondii HOM05D006897 ORTHO05D008825 9.2e-31 137.1 109 56.0
Zm00001eb151640 Zea mays HOM05D006897 ORTHO05D008825 1.2e-30 136.7 123 51.2
HanXRQChr13g0388291 Helianthus annuus HOM05D006897 ORTHO05D008825 2.0e-30 136.0 97 62.9
Mapoly0013s0170 Marchantia polymorpha HOM05D006897 ORTHO05D008825 1.0e-29 133.7 132 51.5
Os01g0776700 Oryza sativa ssp. japonica HOM05D006897 ORTHO05D008825 3.8e-29 131.7 105 56.2
AagrBONN_evm.TU.Sc2ySwM_228.4541 Anthoceros agrestis HOM05D006897 ORTHO05D008825 1.2e-27 126.7 127 47.2
AagrBONN_evm.TU.Sc2ySwM_340.262 Anthoceros agrestis HOM05D006897 ORTHO05D008825 1.6e-27 126.3 138 44.9
Duzib106G0008 Durio zibethinus HOM05D006897 ORTHO05D008825 4.7e-27 124.8 77 71.4
SEGI_02421 Sequoiadendron giganteum HOM05D006897 ORTHO05D008825 1.0e-26 123.6 105 53.3
Dinv37330 Davidia involucrata HOM05D006897 ORTHO05D000180 6.8e-26 120.9 94 57.4
Haze_20509 Corylus avellana HOM05D006897 ORTHO05D008825 2.0e-25 119.4 89 60.7
Rhsim04G0141800 Rhododendron simsii HOM05D006897 ORTHO05D008825 5.8e-25 117.9 79 63.3
SMO134G0180 Selaginella moellendorffii HOM05D006897 ORTHO05D008825 1.3e-24 116.7 119 45.4
Pp3c2_31470 Physcomitrium patens HOM05D006897 ORTHO05D008825 8.3e-24 114.0 105 48.6
Peaxi162Scf00311g01426 Petunia axillaris HOM05D006897 ORTHO05D008825 9.2e-23 110.5 82 59.8
SalBow3G3382 Salvia bowleyana HOM05D006897 ORTHO05D008825 4.6e-22 108.2 130 41.5
Lj3A989T53 Lonicera japonica HOM05D006897 ORTHO05D008825 6.6e-21 104.4 96 50.0
Actinidia32484 Actinidia chinensis HOM05D006897 ORTHO05D008825 5.6e-20 101.3 66 60.6
Peaxi162Scf00658g00012 Petunia axillaris HOM05D006897 ORTHO05D008825 8.9e-18 94.0 121 46.3
HPP92_010165 Vanilla planifolia HOM05D006897 ORTHO05D008825 1.5e-17 93.2 63 61.9
arahy.Tifrunner.gnm1.ann1.Y93F21 Arachis hypogaea HOM05D006897 ORTHO05D008825 2.9e-16 89.0 129 45.0
Sabra16G0184400 Salix brachista HOM05D004505 ORTHO05D005249 1.2e-09 67.0 43 62.8
Nitab4.5_0003762g0010 Nicotiana tabacum HOM05D006897 ORTHO05D008825 2.0e-09 66.2 64 50.0
Rhsim04G0141900 Rhododendron simsii HOM05D006897 ORTHO05D008825 2.2e-08 62.8 49 63.3
Actinidia31321 Actinidia chinensis HOM05D006897 ORTHO05D008825 3.7e-08 62.0 58 51.7
Sabra04G0106300 Salix brachista HOM05D006897 ORTHO05D008825 1.1e-07 60.5 39 59.0


User provided reference genes

Program Settings