Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G31500 Arabidopsis lyrata HOM05D006978 ORTHO05D008723 7.5e-200 700.3 344 100.0
CARHR129600 Cardamine hirsuta HOM05D006978 ORTHO05D008723 3.0e-185 651.7 341 92.7
AT2G35450 Arabidopsis thaliana HOM05D006978 ORTHO05D008723 5.7e-184 647.5 347 92.2
Sp4g17670 Schrenkiella parvula HOM05D006978 ORTHO05D008723 1.1e-179 633.3 344 89.5
Carub.0004s1713 Capsella rubella HOM05D006978 ORTHO05D008723 2.1e-178 629.0 348 89.1
BcaC02g11649 Brassica carinata HOM05D006978 ORTHO05D008723 2.6e-176 622.1 345 87.8
Thhalv10016892m.g Eutrema salsugineum HOM05D006978 ORTHO05D008723 3.4e-176 621.7 340 88.8
BcaB02g09429 Brassica carinata HOM05D006978 ORTHO05D008723 4.9e-175 617.8 346 88.4
C04p12730 Brassica napus HOM05D006978 ORTHO05D008723 4.9e-175 617.8 346 87.6
A05p10300 Brassica napus HOM05D006978 ORTHO05D008723 8.3e-175 617.1 344 87.8
BolC4t22921H Brassica oleracea HOM05D006978 ORTHO05D008723 3.5e-173 611.7 346 86.7
BraA05t19968Z Brassica rapa HOM05D006978 ORTHO05D008723 1.7e-172 609.4 344 86.6
Aa31LG9G13360 Aethionema arabicum HOM05D006978 ORTHO05D008723 3.2e-166 588.6 361 81.2
THA.LOC104814198 Tarenaya hassleriana HOM05D006978 ORTHO05D008723 2.9e-143 512.3 343 73.2
Sabra03G0122900 Salix brachista HOM05D006978 ORTHO05D008723 1.1e-137 493.8 341 69.5
TWI36G1146 Tripterygium wilfordii HOM05D006978 ORTHO05D008723 9.9e-136 487.3 291 77.7
Potri.003G167600 Populus trichocarpa HOM05D006978 ORTHO05D008723 2.2e-135 486.1 306 73.5
FvH4_4g23290 Fragaria vesca HOM05D006978 ORTHO05D008723 3.2e-134 482.3 288 77.4
FAN07G2913 Fragaria x ananassa HOM05D006978 ORTHO05D008723 3.2e-134 482.3 302 74.8
FAN12G0972 Fragaria x ananassa HOM05D006978 ORTHO05D008723 9.3e-134 480.7 288 77.4
FAN17G0898 Fragaria x ananassa HOM05D006978 ORTHO05D008723 9.3e-134 480.7 302 74.5
TAR371G0953 Trochodendron aralioides HOM05D006978 ORTHO05D008723 9.3e-134 480.7 340 67.6
Duzib248G1034 Durio zibethinus HOM05D006978 ORTHO05D008723 7.9e-133 477.6 295 74.6
QL03p051315 Quercus lobata HOM05D006978 ORTHO05D008723 1.3e-132 476.9 306 71.9
Dinv11704 Davidia involucrata HOM05D006978 ORTHO05D008723 2.3e-132 476.1 288 76.7
CiPaw.05G106100 Carya illinoinensis HOM05D006978 ORTHO05D008723 3.0e-132 475.7 299 74.9
Solyc01g009970.3 Solanum lycopersicum HOM05D006978 ORTHO05D008723 3.9e-132 475.3 342 67.8
Actinidia09621 Actinidia chinensis HOM05D006978 ORTHO05D008723 5.1e-132 474.9 344 66.6
HanXRQChr08g0210001 Helianthus annuus HOM05D006978 ORTHO05D008723 1.1e-131 473.8 329 68.1
PGSC0003DMG400005222 Solanum tuberosum HOM05D006978 ORTHO05D008723 1.5e-131 473.4 284 76.1
Thecc.02G200200 Theobroma cacao HOM05D006978 ORTHO05D008723 1.5e-131 473.4 306 73.5
Cfa009396 Carpinus fangiana HOM05D006978 ORTHO05D008723 2.5e-131 472.6 308 72.1
RcHm_v2.0_Chr4g0429651 Rosa chinensis HOM05D006978 ORTHO05D008723 2.5e-131 472.6 288 76.4
Nn3g16378 Nelumbo nucifera HOM05D006978 ORTHO05D008723 3.3e-131 472.2 292 74.7
Hma1.2p1_0065F.1_g034960 Hydrangea macrophylla HOM05D006978 ORTHO05D008723 7.4e-131 471.1 285 76.1
GSVIVG01000920001 Vitis vinifera HOM05D006978 ORTHO05D008723 1.6e-130 469.9 297 73.4
Lj3A1073G42 Lonicera japonica HOM05D006978 ORTHO05D008723 2.1e-130 469.5 298 72.5
Sopen01g005540 Solanum pennellii HOM05D006978 ORTHO05D008723 2.1e-130 469.5 332 68.1
Gorai.005G194100 Gossypium raimondii HOM05D006978 ORTHO05D008723 4.8e-130 468.4 304 72.7
Nitab4.5_0004878g0040 Nicotiana tabacum HOM05D006978 ORTHO05D008723 1.4e-129 466.8 346 65.0
Prupe.1G221700 Prunus persica HOM05D006978 ORTHO05D008723 2.4e-129 466.1 307 72.3
Ciclev10031990m.g Citrus clementina HOM05D006978 ORTHO05D008723 3.1e-129 465.7 321 69.2
CAN.G373.1 Capsicum annuum HOM05D006978 ORTHO05D008723 5.3e-129 464.9 284 73.6
Gohir.A03G149500 Gossypium hirsutum HOM05D006978 ORTHO05D008723 5.3e-129 464.9 322 69.6
PSO478G2402 Papaver somniferum HOM05D006978 ORTHO05D008723 6.9e-129 464.5 336 68.2
CSS0048975 Camellia sinensis var. sinensis HOM05D006978 ORTHO05D008723 1.5e-128 463.4 342 65.5
AUR62005659 Chenopodium quinoa HOM05D006978 ORTHO05D008723 1.5e-128 463.4 298 70.5
AUR62028894 Chenopodium quinoa HOM05D006978 ORTHO05D008723 2.0e-128 463.0 285 73.3
Gohir.D02G172400 Gossypium hirsutum HOM05D006978 ORTHO05D008723 2.0e-128 463.0 304 72.0
Nitab4.5_0001771g0130 Nicotiana tabacum HOM05D006978 ORTHO05D008723 2.0e-128 463.0 311 70.1
PGR102G2599 Punica granatum HOM05D006978 ORTHO05D008723 2.6e-128 462.6 341 66.3
Aqoxy5G03257 Aquilegia oxysepala HOM05D006978 ORTHO05D008723 5.8e-128 461.5 342 64.0
PSO017G5946 Papaver somniferum HOM05D006978 ORTHO05D008723 5.8e-128 461.5 336 67.0
Medtr7g022480 Medicago truncatula HOM05D006978 ORTHO05D008723 1.3e-127 460.3 301 71.4
CsaV3_4G002940 Cucumis sativus L. HOM05D006978 ORTHO05D008723 1.7e-127 459.9 291 73.2
Psat3g186920 Pisum sativum HOM05D006978 ORTHO05D008723 1.7e-127 459.9 308 70.1
Lj1g0015384 Lotus japonicus HOM05D006978 ORTHO05D008723 2.9e-127 459.1 302 73.2
CANSAT01G1132 Cannabis sativa HOM05D006978 ORTHO05D008723 3.8e-127 458.8 294 71.8
EL10Ac6g13545 Beta vulgaris HOM05D006978 ORTHO05D008723 8.4e-127 457.6 288 72.9
Migut.K01011 Erythranthe guttata HOM05D006978 ORTHO05D008723 8.4e-127 457.6 341 65.4
TPR.G2900 Trifolium pratense HOM05D006978 ORTHO05D008723 8.4e-127 457.6 292 72.3
VMungo1383G2882 Vigna mungo HOM05D000485 ORTHO05D000341 1.4e-126 456.8 287 74.6
ClCG07G015370 Citrullus lanatus HOM05D006978 ORTHO05D008723 2.5e-126 456.1 298 70.1
Lalb_Chr10g0092011 Lupinus albus HOM05D006978 ORTHO05D008723 2.5e-126 456.1 283 74.2
MD16G1123900 Malus domestica HOM05D006978 ORTHO05D008723 3.2e-126 455.7 339 66.7
ECA233G0335 Erigeron canadensis HOM05D006978 ORTHO05D008723 7.1e-126 454.5 290 73.1
MELO3C017748.2 Cucumis melo HOM05D006978 ORTHO05D008723 9.3e-126 454.1 333 65.5
Ca_07142_v3 Cicer arietinum L. HOM05D006978 ORTHO05D008723 2.1e-125 453.0 284 74.3
Cc11_g17300 Coffea canephora HOM05D006978 ORTHO05D008723 2.1e-125 453.0 290 72.1
arahy.Tifrunner.gnm1.ann1.2517Z7 Arachis hypogaea HOM05D006978 ORTHO05D008723 2.7e-125 452.6 297 69.7
arahy.Tifrunner.gnm1.ann1.HCE1UU Arachis hypogaea HOM05D006978 ORTHO05D008723 2.7e-125 452.6 297 69.7
Eucgr.B03530 Eucalyptus grandis HOM05D006978 ORTHO05D008723 6.0e-125 451.4 286 72.4
Oeu011352.1 Olea europaea HOM05D006978 ORTHO05D008723 9.6e-123 444.1 288 71.9
Atru.BG.287.p Acer truncatum HOM05D006978 ORTHO05D008723 2.1e-122 443.0 269 75.1
Os04g0391900 Oryza sativa ssp. japonica HOM05D006978 ORTHO05D008723 1.8e-121 439.9 284 70.4
DCAR_031207 Daucus carota HOM05D006978 ORTHO05D008723 3.1e-121 439.1 291 68.0
Glyma.18G285000 Glycine max HOM05D006978 ORTHO05D008723 6.9e-121 438.0 286 68.9
Hund06110 Selenicereus undatus HOM05D006978 ORTHO05D008723 7.9e-117 424.5 295 68.5
SalBow2G2397 Salvia bowleyana HOM05D006978 ORTHO05D008723 2.3e-116 422.9 333 62.5
Sc11g0000330 Simmondsia chinensis HOM05D006978 ORTHO05D008723 1.1e-115 420.6 286 67.8
Peaxi162Scf00255g00025 Petunia axillaris HOM05D006978 ORTHO05D008723 2.2e-114 416.4 248 75.8
vmacro16091 Vaccinium macrocarpon HOM05D006978 ORTHO05D008723 1.4e-113 413.7 356 58.4
SEGI_15057 Sequoiadendron giganteum HOM05D006978 ORTHO05D008723 1.5e-112 410.2 314 62.1
Sed0026660 Sechium edule HOM05D006978 ORTHO05D008723 5.0e-111 405.2 284 66.9
Atru.chr11.2376 Acer truncatum HOM05D006978 ORTHO05D008723 6.5e-111 404.8 245 75.1
Mapoly0133s0049 Marchantia polymorpha HOM05D006978 ORTHO05D008723 8.5e-111 404.4 299 59.9
Glyma.18G284800 Glycine max HOM05D006978 ORTHO05D008723 7.9e-109 397.9 286 66.8
Haze_12456 Corylus avellana HOM05D006978 ORTHO05D008723 1.8e-108 396.7 257 72.4
ATR0582G006 Amborella trichopoda HOM05D006978 ORTHO05D008723 9.7e-107 391.0 244 73.0
Phvul.008G016700 Phaseolus vulgaris HOM05D006978 ORTHO05D008723 1.8e-105 386.7 244 74.2
Pp3c1_20610 Physcomitrium patens HOM05D006978 ORTHO05D008723 1.8e-105 386.7 298 58.7
Ah.02g130990 Amaranthus hybridus HOM05D006978 ORTHO05D008723 1.6e-101 373.6 288 63.2
SMO118G0021 Selaginella moellendorffii HOM05D006978 ORTHO05D008723 2.7e-101 372.9 287 57.5
CDE06G2364 Ceratophyllum demersum HOM05D006978 ORTHO05D008723 4.5e-96 355.5 289 58.5
AagrBONN_evm.TU.Sc2ySwM_117.2371 Anthoceros agrestis HOM05D006978 ORTHO05D008723 2.7e-93 346.3 283 55.5
Manes.13G007900 Manihot esculenta HOM05D006978 ORTHO05D008723 8.8e-92 341.3 214 74.8
Zm00001eb421220 Zea mays HOM05D006978 ORTHO05D008723 7.7e-80 301.6 197 71.1
MCO09G507 Micromonas commoda HOM05D006978 ORTHO05D008723 5.7e-75 285.4 292 50.0
MSTRG.476 Avicennia marina HOM05D006978 ORTHO05D008723 6.6e-63 245.4 153 73.9
Cpa.g.sc99.56 Carica papaya HOM05D006978 ORTHO05D008723 3.2e-57 226.5 144 73.6
MBI11_g38268_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 9.2e-49 198.4 110 77.3
Glyma.02G096500 Glycine max HOM05D006978 ORTHO05D008723 3.5e-48 196.4 114 74.6
PRCOL_00001136 Prasinoderma coloniale HOM05D006978 ORTHO05D008723 3.7e-42 176.4 285 36.8
SalBow2G1646 Salvia bowleyana HOM05D006978 ORTHO05D008723 3.7e-42 176.4 105 79.0
Hma1.2p1_0065F.1_g034970 Hydrangea macrophylla HOM05D006978 ORTHO05D008723 5.4e-41 172.6 99 80.8
MBI11_g38269_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 1.6e-32 144.4 108 60.2
Actinidia34017 Actinidia chinensis HOM05D006978 ORTHO05D008723 2.7e-32 143.7 155 50.3
arahy.Tifrunner.gnm1.ann1.5L80US Arachis hypogaea HOM05D006978 ORTHO05D008723 3.1e-28 130.2 85 72.9
Rhsim12G0096200 Rhododendron simsii HOM05D006978 ORTHO05D008723 1.1e-25 121.7 135 48.1
Cpa.g.sc99.55 Carica papaya HOM05D006978 ORTHO05D008723 2.7e-24 117.1 140 46.4
arahy.Tifrunner.gnm1.ann1.0RBU3Z Arachis hypogaea HOM05D006978 ORTHO05D008723 3.1e-12 77.0 55 58.2
Peaxi162Scf00255g00026 Petunia axillaris HOM05D006978 ORTHO05D008723 2.2e-10 70.9 44 70.5
MBI11_g31938_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 3.8e-10 70.1 49 61.2
RcHm_v2.0_Chr2g0135531 Rosa chinensis HOM05D006978 ORTHO05D008723 6.0e-08 62.8 43 62.8
MBI11_g31937_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 1.3e-07 61.6 42 64.3


User provided reference genes

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