Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G31410 Arabidopsis lyrata HOM05D006861 ORTHO05D008620 8.6e-120 433.7 227 100.0
AT2G35360 Arabidopsis thaliana HOM05D006861 ORTHO05D008620 8.6e-112 407.1 227 92.1
Carub.0004s1705 Capsella rubella HOM05D006861 ORTHO05D008620 2.9e-107 392.1 227 87.7
Thhalv10017211m.g Eutrema salsugineum HOM05D006861 ORTHO05D008620 3.2e-106 388.7 226 87.2
Sp4g17580 Schrenkiella parvula HOM05D006861 ORTHO05D008620 2.1e-105 386.0 226 87.2
CARHR129520 Cardamine hirsuta HOM05D006861 ORTHO05D008620 8.6e-104 380.6 228 88.6
BraA05t19976Z Brassica rapa HOM05D006861 ORTHO05D008620 2.0e-100 369.4 218 86.7
BcaC02g11640 Brassica carinata HOM05D006861 ORTHO05D008620 4.4e-100 368.2 211 88.6
C04p12840 Brassica napus HOM05D006861 ORTHO05D008620 4.4e-100 368.2 211 88.6
BolC4t22928H Brassica oleracea HOM05D006861 ORTHO05D008620 4.4e-100 368.2 211 88.6
A05p10410 Brassica napus HOM05D006861 ORTHO05D008620 9.9e-100 367.1 218 83.9
BcaB02g09437 Brassica carinata HOM05D006861 ORTHO05D008620 2.9e-99 365.5 216 86.1
Aa31LG9G15370 Aethionema arabicum HOM05D006861 ORTHO05D008620 1.9e-98 362.8 226 79.2
THA.LOC104807964 Tarenaya hassleriana HOM05D006861 ORTHO05D008620 2.4e-90 335.9 227 73.1
Thecc.03G231500 Theobroma cacao HOM05D006861 ORTHO05D008620 1.3e-75 287.0 218 64.2
QL12p006269 Quercus lobata HOM05D006861 ORTHO05D008620 9.3e-74 280.8 235 61.3
Duzib205G0961 Durio zibethinus HOM05D006861 ORTHO05D008620 2.1e-73 279.6 210 65.2
Cfa012408 Carpinus fangiana HOM05D006861 ORTHO05D008620 3.5e-73 278.9 217 64.5
Haze_08270 Corylus avellana HOM05D006861 ORTHO05D008620 6.0e-73 278.1 223 62.3
Gohir.A12G209800 Gossypium hirsutum HOM05D006861 ORTHO05D008620 1.3e-72 276.9 218 62.8
Potri.003G089400 Populus trichocarpa HOM05D006861 ORTHO05D008620 1.3e-72 276.9 230 62.2
Gohir.D12G212500 Gossypium hirsutum HOM05D006861 ORTHO05D008620 3.0e-72 275.8 210 65.2
Duzib068G0493 Durio zibethinus HOM05D006861 ORTHO05D008620 3.9e-72 275.4 205 65.4
Medtr4g098640 Medicago truncatula HOM05D006861 ORTHO05D008620 3.9e-72 275.4 218 64.2
Prupe.5G041200 Prunus persica HOM05D006861 ORTHO05D008620 6.7e-72 274.6 212 66.0
Lj4g0014575 Lotus japonicus HOM05D006861 ORTHO05D008620 8.7e-72 274.2 223 61.0
Ciclev10032685m.g Citrus clementina HOM05D006861 ORTHO05D008620 1.1e-71 273.9 218 64.2
Gohir.D03G170200 Gossypium hirsutum HOM05D006861 ORTHO05D008620 1.5e-71 273.5 226 61.1
GSVIVG01013176001 Vitis vinifera HOM05D006861 ORTHO05D008620 1.5e-71 273.5 212 63.2
COL.COLO4_17076 Corchorus olitorius HOM05D006861 ORTHO05D008620 1.9e-71 273.1 210 67.6
Gorai.003G180500 Gossypium raimondii HOM05D006861 ORTHO05D008620 1.9e-71 273.1 226 61.1
arahy.Tifrunner.gnm1.ann1.A00F14 Arachis hypogaea HOM05D006861 ORTHO05D008620 7.4e-71 271.2 220 61.4
FvH4_5g21620 Fragaria vesca HOM05D006861 ORTHO05D008620 7.4e-71 271.2 212 63.7
Glyma.17G153700 Glycine max HOM05D006861 ORTHO05D008620 1.3e-70 270.4 210 63.3
arahy.Tifrunner.gnm1.ann1.P9U8RJ Arachis hypogaea HOM05D006861 ORTHO05D008620 1.6e-70 270.0 220 61.8
Manes.17G013800 Manihot esculenta HOM05D006861 ORTHO05D008620 1.6e-70 270.0 210 64.3
Dinv28930 Davidia involucrata HOM05D006861 ORTHO05D008620 2.8e-70 269.2 216 61.6
CANSAT21G0325 Cannabis sativa HOM05D006861 ORTHO05D008620 4.8e-70 268.5 226 61.1
Sabra03G0059200 Salix brachista HOM05D006861 ORTHO05D008620 6.2e-70 268.1 214 63.6
Gohir.A03G002100 Gossypium hirsutum HOM05D006861 ORTHO05D008620 8.2e-70 267.7 226 60.2
Psat4g079280 Pisum sativum HOM05D006861 ORTHO05D008620 1.1e-69 267.3 210 63.3
FAN18G0349 Fragaria x ananassa HOM05D006861 ORTHO05D008620 1.4e-69 266.9 209 63.2
VMungo0251G0361 Vigna mungo HOM05D006861 ORTHO05D008620 1.8e-69 266.5 210 63.3
FAN13G1018 Fragaria x ananassa HOM05D006861 ORTHO05D008620 2.4e-69 266.2 217 63.6
FAN08G0129 Fragaria x ananassa HOM05D006861 ORTHO05D008620 3.1e-69 265.8 212 65.1
Aqoxy3G02463 Aquilegia oxysepala HOM05D006861 ORTHO05D008620 4.1e-69 265.4 212 63.2
CiPaw.11G090800 Carya illinoinensis HOM05D006861 ORTHO05D008620 4.1e-69 265.4 217 61.3
Glyma.05G113600 Glycine max HOM05D006861 ORTHO05D008620 4.1e-69 265.4 210 62.9
MD06G1031100 Malus domestica HOM05D006861 ORTHO05D008620 4.1e-69 265.4 212 63.7
TPR.G28655 Trifolium pratense HOM05D006861 ORTHO05D008620 4.1e-69 265.4 210 62.9
RcHm_v2.0_Chr7g0209081 Rosa chinensis HOM05D006861 ORTHO05D008620 5.3e-69 265.0 231 59.7
Actinidia14818 Actinidia chinensis HOM05D006861 ORTHO05D008620 6.9e-69 264.6 228 57.0
Eucgr.D02180 Eucalyptus grandis HOM05D006861 ORTHO05D008620 1.2e-68 263.8 219 62.6
FAN04G0264 Fragaria x ananassa HOM05D006861 ORTHO05D008620 1.2e-68 263.8 211 63.0
DCAR_008287 Daucus carota HOM05D006861 ORTHO05D008620 1.5e-68 263.5 215 60.0
Hma1.2p1_0585F.1_g183570 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 1.5e-68 263.5 218 61.0
Lalb_Chr09g0329521 Lupinus albus HOM05D006861 ORTHO05D008620 2.0e-68 263.1 210 62.4
Gorai.008G228100 Gossypium raimondii HOM05D006861 ORTHO05D008620 2.6e-68 262.7 221 60.6
QL12p006401 Quercus lobata HOM05D006861 ORTHO05D008620 2.6e-68 262.7 284 50.7
Ca_22062_v3 Cicer arietinum L. HOM05D006861 ORTHO05D008620 7.6e-68 261.2 227 58.6
Lsat_1_v5_gn_8_112001 Lactuca sativa HOM05D006861 ORTHO05D008620 1.3e-67 260.4 224 58.0
Ah.12g054700 Amaranthus hybridus HOM05D006861 ORTHO05D008620 3.8e-67 258.8 221 61.1
TAR629G3318 Trochodendron aralioides HOM05D006861 ORTHO05D008620 8.4e-67 257.7 217 63.1
CSS0014670 Camellia sinensis var. sinensis HOM05D006861 ORTHO05D008620 1.9e-66 256.5 226 58.0
EL10Ac5g12163 Beta vulgaris HOM05D006861 ORTHO05D008620 3.2e-66 255.8 220 61.8
CSS0041220 Camellia sinensis var. sinensis HOM05D006861 ORTHO05D008620 4.2e-66 255.4 226 57.5
ATR0049G013 Amborella trichopoda HOM05D006861 ORTHO05D008620 9.3e-66 254.2 212 57.5
AUR62007255 Chenopodium quinoa HOM05D006861 ORTHO05D008620 9.3e-66 254.2 216 57.9
Sed0027053 Sechium edule HOM05D006861 ORTHO05D008620 9.3e-66 254.2 220 57.3
ClCG10G001830 Citrullus lanatus HOM05D006861 ORTHO05D008620 2.1e-65 253.1 221 57.0
Cc08_g02400 Coffea canephora HOM05D006861 ORTHO05D008620 2.7e-65 252.7 226 57.5
CsaV3_3G001910 Cucumis sativus L. HOM05D006861 ORTHO05D008620 2.7e-65 252.7 211 59.2
Sc07g0008780 Simmondsia chinensis HOM05D006861 ORTHO05D008620 3.5e-65 252.3 232 56.5
MELO3C013865.2 Cucumis melo HOM05D006861 ORTHO05D008620 4.6e-65 251.9 211 59.2
HanXRQChr16g0511531 Helianthus annuus HOM05D006861 ORTHO05D008620 1.8e-64 250.0 210 57.1
PSO782G3300 Papaver somniferum HOM05D006861 ORTHO05D008620 3.3e-63 245.7 212 59.0
HPP92_028475 Vanilla planifolia HOM05D006861 ORTHO05D008620 4.3e-63 245.4 212 57.1
ECA233G2855 Erigeron canadensis HOM05D006861 ORTHO05D008620 5.7e-63 245.0 224 54.5
HPP92_027725 Vanilla planifolia HOM05D006861 ORTHO05D008620 7.4e-63 244.6 212 57.1
PSO063G6338 Papaver somniferum HOM05D006861 ORTHO05D008620 9.7e-63 244.2 212 58.5
Rhsim07G0124500 Rhododendron simsii HOM05D006861 ORTHO05D008620 9.7e-63 244.2 212 56.1
AUR62018744 Chenopodium quinoa HOM05D006861 ORTHO05D008620 8.2e-62 241.1 221 53.4
Migut.A01006 Erythranthe guttata HOM05D006861 ORTHO05D008620 1.1e-61 240.7 212 54.2
MSTRG.12154 Avicennia marina HOM05D006861 ORTHO05D008620 1.4e-61 240.4 216 54.6
Os09g0573100 Oryza sativa ssp. japonica HOM05D006861 ORTHO05D008620 6.9e-61 238.0 214 59.8
Nn6g33632 Nelumbo nucifera HOM05D006861 ORTHO05D008620 9.0e-61 237.7 267 50.9
SGA_v2.0_scaffold198G41105 Striga asiatica HOM05D006861 ORTHO05D008620 9.0e-61 237.7 216 53.2
Zm00001eb307090 Zea mays HOM05D006861 ORTHO05D008620 9.0e-61 237.7 216 56.5
Sopen08g002990 Solanum pennellii HOM05D006861 ORTHO05D008620 4.5e-60 235.3 212 58.0
TWI60G1564 Tripterygium wilfordii HOM05D006861 ORTHO05D008620 1.0e-59 234.2 218 57.3
CAN.G845.34 Capsicum annuum HOM05D006861 ORTHO05D008620 1.3e-59 233.8 212 57.1
Nitab4.5_0000535g0140 Nicotiana tabacum HOM05D006861 ORTHO05D008620 1.7e-59 233.4 229 52.4
Nitab4.5_0007026g0050 Nicotiana tabacum HOM05D006861 ORTHO05D008620 5.0e-59 231.9 218 55.0
Solyc08g007030.3 Solanum lycopersicum HOM05D006861 ORTHO05D008620 1.1e-58 230.7 212 56.1
Peaxi162Scf00102g00630 Petunia axillaris HOM05D006861 ORTHO05D008620 1.4e-58 230.3 223 54.3
PGSC0003DMG400020500 Solanum tuberosum HOM05D006861 ORTHO05D008620 1.4e-58 230.3 212 56.1
SalBow6G5529 Salvia bowleyana HOM05D006861 ORTHO05D008620 7.2e-58 228.0 212 52.8
SEGI_11276 Sequoiadendron giganteum HOM05D006861 ORTHO05D008620 2.0e-55 219.9 209 48.3
CDE12G0071 Ceratophyllum demersum HOM05D006861 ORTHO05D008620 9.7e-55 217.6 189 55.0
vmacro14159 Vaccinium macrocarpon HOM05D006861 ORTHO05D008620 4.1e-53 212.2 207 52.7
Phvul.003G229300 Phaseolus vulgaris HOM05D006861 ORTHO05D008620 2.0e-52 209.9 156 66.7
Cpa.g.sc90.59 Carica papaya HOM05D006861 ORTHO05D008620 3.4e-52 209.1 143 69.9
Lj2A243G18 Lonicera japonica HOM05D006861 ORTHO05D008620 9.4e-50 201.1 143 65.7
Gohir.A09G039700 Gossypium hirsutum HOM05D006861 ORTHO05D008620 7.9e-49 198.0 152 64.5
Pp3c1_27050 Physcomitrium patens HOM05D006861 ORTHO05D008620 5.7e-47 191.8 213 47.4
Hma1.2p1_0585F.1_g183580 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 1.7e-46 190.3 211 49.8
Dinv25198 Davidia involucrata HOM05D006861 ORTHO05D008620 1.4e-45 187.2 144 68.1
Actinidia09224 Actinidia chinensis HOM05D006861 ORTHO05D008620 1.2e-44 184.1 139 63.3
HanXRQChr16g0517491 Helianthus annuus HOM05D006861 ORTHO05D008620 3.7e-38 162.5 113 66.4
Atru.BG.44.p Acer truncatum HOM05D006861 ORTHO05D008620 1.1e-37 161.0 114 65.8
Hma1.2p1_2232F.1_g317620 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 5.9e-36 155.2 211 43.1
CBR_g57857 Chara braunii HOM05D006861 ORTHO05D008620 1.3e-27 127.5 192 41.7
Cre12.g533400 Chlamydomonas reinhardtii HOM05D006861 ORTHO05D008620 1.5e-15 87.4 225 31.6
PRCOL_00000188 Prasinoderma coloniale HOM05D006861 ORTHO05D008620 2.0e-12 77.0 102 40.2
MCO13G047 Micromonas commoda HOM05D006861 ORTHO05D008620 4.7e-09 65.9 210 26.2


User provided reference genes

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