Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G30880 Arabidopsis lyrata HOM05D011208 ORTHO05D016606 2.0e-56 222.2 117 100.0
AT2G34870 Arabidopsis thaliana HOM05D011208 ORTHO05D016606 9.4e-54 213.4 117 94.9
Carub.0004s1655 Capsella rubella HOM05D011208 ORTHO05D016606 1.1e-41 173.3 115 82.6
Sp4g17150 Schrenkiella parvula HOM05D011208 ORTHO05D016606 6.1e-29 131.0 113 67.3
A05p10800 Brassica napus HOM05D011208 ORTHO05D016606 9.8e-27 123.6 114 64.9
BraA05t20024Z Brassica rapa HOM05D011208 ORTHO05D016606 9.8e-27 123.6 114 64.9
Thhalv10017469m.g Eutrema salsugineum HOM05D011208 ORTHO05D016606 6.4e-26 120.9 114 66.7
BcaC02g11571 Brassica carinata HOM05D011208 ORTHO05D016606 3.3e-22 108.6 115 59.1
BcaB02g09502 Brassica carinata HOM05D011208 ORTHO05D016606 1.6e-21 106.3 130 54.6
AL1G44940 Arabidopsis lyrata HOM05D011208 ORTHO05D038585 1.5e-11 73.2 113 51.3
BolC4t22979H Brassica oleracea HOM05D011208 ORTHO05D016606 1.3e-10 70.1 115 47.0
AT3G02670 Arabidopsis thaliana HOM05D045904 ORTHO05D038709 4.9e-10 68.2 92 55.4
AL3G12050 Arabidopsis lyrata HOM05D045904 ORTHO05D038709 4.1e-09 65.1 104 45.2
AT1G30795 Arabidopsis thaliana HOM05D011208 ORTHO05D038585 9.2e-09 63.9 120 48.3
BcaC01g05750 Brassica carinata HOM05D011208 ORTHO05D024438 1.5e-06 56.6 68 55.9


User provided reference genes

Program Settings