Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G30810 Arabidopsis lyrata HOM05D010425 ORTHO05D014400 7.5e-33 143.3 73 100.0
AT2G34825 Arabidopsis thaliana HOM05D010425 ORTHO05D014400 1.0e-29 132.9 71 91.5
Carub.0004s1429 Capsella rubella HOM05D010425 ORTHO05D014400 6.5e-29 130.2 73 89.0
AL4G28390 Arabidopsis lyrata HOM05D010425 ORTHO05D014400 2.1e-27 125.2 73 87.7
AT2G32885 Arabidopsis thaliana HOM05D010425 ORTHO05D014400 2.7e-27 124.8 73 87.7
CARHR126820 Cardamine hirsuta HOM05D010425 ORTHO05D014400 6.6e-21 103.6 72 72.2
A03p21990 Brassica napus HOM05D010425 ORTHO05D014400 6.6e-13 77.0 73 63.0
BraA03t11434Z Brassica rapa HOM05D010425 ORTHO05D014400 6.6e-13 77.0 73 63.0
BcaB01g03606 Brassica carinata HOM05D010425 ORTHO05D014400 7.3e-12 73.6 71 63.4
Thhalv10017504m.g Eutrema salsugineum HOM05D010425 ORTHO05D014400 9.5e-12 73.2 73 58.9
BcaC07g41323 Brassica carinata HOM05D010425 ORTHO05D014400 1.4e-10 69.3 73 57.5
C08p43320 Brassica napus HOM05D010425 ORTHO05D014400 1.8e-10 68.9 73 56.2
BolC8t51881H Brassica oleracea HOM05D010425 ORTHO05D014400 1.8e-10 68.9 73 56.2
BolC3t14992H Brassica oleracea HOM05D010425 ORTHO05D014400 8.9e-10 66.6 66 59.1
TPR.G6428 Trifolium pratense HOM05D009824 ORTHO05D012089 2.4e-07 58.5 69 46.4
TPR.G6486 Trifolium pratense HOM05D009824 ORTHO05D012089 1.2e-06 56.2 70 41.4
Lalb_Chr22g0356671 Lupinus albus HOM05D009824 ORTHO05D012089 3.5e-06 54.7 72 36.1
Lalb_Chr22g0356691 Lupinus albus HOM05D009824 ORTHO05D012089 3.5e-06 54.7 72 36.1


User provided reference genes

Program Settings