Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G30550 Arabidopsis lyrata HOM05D007451 ORTHO05D009399 4.8e-80 301.2 163 100.0
AT2G34580 Arabidopsis thaliana HOM05D007451 ORTHO05D009399 4.5e-70 268.1 163 88.3
Carub.0004s1625 Capsella rubella HOM05D007451 ORTHO05D009399 5.9e-70 267.7 163 87.7
BcaC02g11529 Brassica carinata HOM05D007451 ORTHO05D009399 1.2e-67 260.0 163 82.8
Sp4g16840 Schrenkiella parvula HOM05D007451 ORTHO05D009399 2.7e-67 258.8 163 84.0
BcaB02g09525 Brassica carinata HOM05D007451 ORTHO05D009399 7.9e-67 257.3 163 82.2
Thhalv10017344m.g Eutrema salsugineum HOM05D007451 ORTHO05D009399 3.0e-66 255.4 163 85.3
CARHR128670 Cardamine hirsuta HOM05D007451 ORTHO05D009399 7.4e-65 250.8 161 85.1
BraA05t20052Z Brassica rapa HOM05D007451 ORTHO05D009399 1.3e-61 240.0 191 69.6
BolC4t23021H Brassica oleracea HOM05D005261 ORTHO05D006180 1.5e-54 216.5 138 80.4
A05p11060 Brassica napus HOM05D005261 ORTHO05D006180 2.9e-53 212.2 137 79.6
Atru.chr10.1223 Acer truncatum HOM05D005618 ORTHO05D007278 6.8e-42 174.5 157 61.1
GSVIVG01021497001 Vitis vinifera HOM05D007451 ORTHO05D009399 2.0e-41 172.9 160 61.2
Potri.004G132600 Populus trichocarpa HOM05D007451 ORTHO05D009399 9.7e-41 170.6 161 57.1
CiPaw.10G091600 Carya illinoinensis HOM05D007451 ORTHO05D009399 1.2e-38 163.7 161 55.3
Manes.17G070400 Manihot esculenta HOM05D007451 ORTHO05D009399 2.0e-38 162.9 161 53.4
C04p14410 Brassica napus HOM05D007451 ORTHO05D009399 1.5e-36 156.8 133 64.7
Thecc.06G150100 Theobroma cacao HOM05D007451 ORTHO05D009399 1.9e-36 156.4 160 53.8
RcHm_v2.0_Chr5g0014241 Rosa chinensis HOM05D007451 ORTHO05D009399 1.6e-35 153.3 160 56.2
BolC4t27857H Brassica oleracea HOM05D007451 ORTHO05D009399 3.6e-35 152.1 99 81.8
Lj1C1189G10 Lonicera japonica HOM05D007451 ORTHO05D009399 8.0e-35 151.0 161 53.4
Sabra04G0085400 Salix brachista HOM05D007451 ORTHO05D009399 8.0e-35 151.0 187 48.1
CANSAT35G1195 Cannabis sativa HOM05D007451 ORTHO05D009399 2.3e-34 149.4 161 51.6
TAR624G0819 Trochodendron aralioides HOM05D007451 ORTHO05D009399 8.8e-34 147.5 160 51.9
Lsat_1_v5_gn_7_28421 Lactuca sativa HOM05D007451 ORTHO05D009399 2.0e-33 146.4 160 53.1
HanXRQChr04g0114281 Helianthus annuus HOM05D007451 ORTHO05D009399 1.3e-32 143.7 151 53.0
CSS0045800 Camellia sinensis var. sinensis HOM05D007451 ORTHO05D009399 1.7e-32 143.3 144 52.8
TWI73G0492 Tripterygium wilfordii HOM05D007451 ORTHO05D009399 1.7e-32 143.3 160 50.6
FAN21G0862 Fragaria x ananassa HOM05D007451 ORTHO05D009399 2.8e-32 142.5 180 52.8
Sc17g0004890 Simmondsia chinensis HOM05D007451 ORTHO05D009399 3.7e-32 142.1 160 51.2
FAN11G0575 Fragaria x ananassa HOM05D007451 ORTHO05D009399 4.8e-32 141.7 168 51.8
Oeu031273.1 Olea europaea HOM05D007451 ORTHO05D009399 8.3e-32 141.0 151 53.0
Medtr4g084470 Medicago truncatula HOM05D007451 ORTHO05D009399 1.8e-31 139.8 148 51.4
ECA246G3905 Erigeron canadensis HOM05D007451 ORTHO05D009399 4.1e-31 138.7 156 51.3
Ciclev10018276m.g Citrus clementina HOM05D007451 ORTHO05D009399 5.4e-31 138.3 160 51.9
arahy.Tifrunner.gnm1.ann1.ZU2BT9 Arachis hypogaea HOM05D007451 ORTHO05D009399 1.6e-30 136.7 155 49.0
Nitab4.5_0003044g0100 Nicotiana tabacum HOM05D007451 ORTHO05D009399 3.5e-30 135.6 161 46.6
PSO675G9053 Papaver somniferum HOM05D007451 ORTHO05D009399 5.9e-30 134.8 160 48.8
PSO541G4911 Papaver somniferum HOM05D007451 ORTHO05D009399 7.7e-30 134.4 160 47.5
TPR.G38261 Trifolium pratense HOM05D007451 ORTHO05D009399 1.0e-29 134.0 144 50.7
Psat7g130000 Pisum sativum HOM05D007451 ORTHO05D009399 2.3e-29 132.9 151 49.0
arahy.Tifrunner.gnm1.ann1.Z8IVUX Arachis hypogaea HOM05D007451 ORTHO05D009399 6.6e-29 131.3 146 48.6
VMungo0251G0908 Vigna mungo HOM05D007451 ORTHO05D009399 6.6e-29 131.3 151 50.3
EL10Ac8g19670 Beta vulgaris HOM05D007451 ORTHO05D009399 4.2e-28 128.6 162 47.5
FAN25G1374 Fragaria x ananassa HOM05D005618 ORTHO05D007278 5.5e-28 128.3 147 55.1
CAN.G65.121 Capsicum annuum HOM05D007451 ORTHO05D009399 7.2e-28 127.9 161 47.2
Eucgr.E03355 Eucalyptus grandis HOM05D007451 ORTHO05D009399 9.5e-28 127.5 154 47.4
Phvul.002G096800 Phaseolus vulgaris HOM05D007451 ORTHO05D009399 9.5e-28 127.5 151 49.0
Glyma.20G018400 Glycine max HOM05D007451 ORTHO05D009399 1.6e-27 126.7 144 50.0
Gohir.A10G041200 Gossypium hirsutum HOM05D007451 ORTHO05D009399 4.7e-27 125.2 161 46.6
Gohir.D10G042000 Gossypium hirsutum HOM05D007451 ORTHO05D009399 4.7e-27 125.2 161 46.6
Gorai.011G044600 Gossypium raimondii HOM05D007451 ORTHO05D009399 4.7e-27 125.2 161 46.6
THA.LOC104814695 Tarenaya hassleriana HOM05D007451 ORTHO05D009399 8.0e-27 124.4 151 49.7
EL10Ac8g19669 Beta vulgaris HOM05D007451 ORTHO05D009399 1.0e-26 124.0 155 48.4
Cfa000938 Carpinus fangiana HOM05D007451 ORTHO05D009399 2.3e-26 122.9 161 46.0
Prupe.4G081100 Prunus persica HOM05D007451 ORTHO05D009399 6.8e-26 121.3 148 48.0
Rhsim02G0158600 Rhododendron simsii HOM05D007451 ORTHO05D009399 8.9e-26 120.9 179 39.1
Actinidia07699 Actinidia chinensis HOM05D007451 ORTHO05D009399 2.0e-25 119.8 137 49.6
MBI07_g23439_MAGBIO Magnolia biondii HOM05D007451 ORTHO05D009399 2.0e-25 119.8 161 41.6
Hma1.2p1_0286F.1_g114180 Hydrangea macrophylla HOM05D007451 ORTHO05D009399 4.4e-25 118.6 163 43.6
Cc10_g10170 Coffea canephora HOM05D007451 ORTHO05D009399 1.3e-24 117.1 144 49.3
MD05G1283500 Malus domestica HOM05D007451 ORTHO05D009399 1.3e-24 117.1 148 47.3
Aqoxy1G01697 Aquilegia oxysepala HOM05D007451 ORTHO05D009399 6.3e-24 114.8 159 44.0
AUR62030193 Chenopodium quinoa HOM05D007451 ORTHO05D009399 1.1e-23 114.0 160 45.6
AUR62002741 Chenopodium quinoa HOM05D007451 ORTHO05D009399 1.4e-23 113.6 144 46.5
BolC4t23024H Brassica oleracea HOM05D007451 ORTHO05D009399 2.4e-23 112.8 79 69.6
Eucgr.B02066 Eucalyptus grandis HOM05D007451 ORTHO05D009399 2.4e-23 112.8 144 44.4
QL05p057933 Quercus lobata HOM05D007451 ORTHO05D009399 4.1e-23 112.1 143 45.5
AUR62002733 Chenopodium quinoa HOM05D007451 ORTHO05D009399 7.0e-23 111.3 144 45.8
DCAR_003911 Daucus carota HOM05D007451 ORTHO05D009399 9.2e-23 110.9 107 57.0
Nitab4.5_0003838g0080 Nicotiana tabacum HOM05D007451 ORTHO05D009399 2.0e-22 109.8 151 43.0
Nn4g26566 Nelumbo nucifera HOM05D007451 ORTHO05D009399 3.5e-22 109.0 161 44.1
BcaB06g28783 Brassica carinata HOM05D007451 ORTHO05D009399 1.3e-21 107.1 72 73.6
Dinv32247 Davidia involucrata HOM05D007451 ORTHO05D009399 6.6e-21 104.8 143 44.8
Glyma.07G220100 Glycine max HOM05D007451 ORTHO05D009399 1.5e-20 103.6 151 43.7
Gorai.008G053800 Gossypium raimondii HOM05D007451 ORTHO05D009399 1.5e-20 103.6 145 43.4
C04p14350 Brassica napus HOM05D005261 ORTHO05D006180 2.5e-20 102.8 67 77.6
Gohir.D12G050550 Gossypium hirsutum HOM05D007451 ORTHO05D009399 4.3e-20 102.1 144 43.8
Gorai.004G185100 Gossypium raimondii HOM05D007451 ORTHO05D009399 2.8e-19 99.4 144 43.8
CSS0015635 Camellia sinensis var. sinensis HOM05D007451 ORTHO05D009399 6.1e-19 98.2 131 44.3
FvH4_3g05500 Fragaria vesca HOM05D007451 ORTHO05D009399 6.1e-19 98.2 160 43.8
Duzib192G0695 Durio zibethinus HOM05D007451 ORTHO05D009399 2.0e-17 93.2 145 41.4
Gohir.D12G174800 Gossypium hirsutum HOM05D007451 ORTHO05D009399 5.8e-17 91.7 136 42.6
Eucgr.I02284 Eucalyptus grandis HOM05D007451 ORTHO05D009399 1.3e-16 90.5 175 37.7
Lj4g0011610 Lotus japonicus HOM05D007451 ORTHO05D009399 1.7e-16 90.1 107 41.1
Eucgr.H02213 Eucalyptus grandis HOM05D007451 ORTHO05D009399 6.4e-16 88.2 89 50.6
Lalb_Chr16g0385141 Lupinus albus HOM05D007451 ORTHO05D009399 8.3e-16 87.8 156 38.5
BcaC02g11526 Brassica carinata HOM05D007451 ORTHO05D009399 1.2e-14 84.0 59 67.8
arahy.Tifrunner.gnm1.ann1.WBAN0Y Arachis hypogaea HOM05D007451 ORTHO05D009399 1.7e-13 80.1 119 39.5
Zm00001eb204550 Zea mays HOM05D007451 ORTHO05D009399 6.2e-11 71.6 125 37.6
Eucgr.J01485 Eucalyptus grandis HOM05D007451 ORTHO05D009399 1.4e-10 70.5 96 39.6
Eucgr.C02335 Eucalyptus grandis HOM05D007451 ORTHO05D009399 5.2e-10 68.6 78 43.6
vmacro10959 Vaccinium macrocarpon HOM05D007451 ORTHO05D009399 7.5e-09 64.7 74 41.9
Haze_05609 Corylus avellana HOM05D007451 ORTHO05D009399 2.9e-08 62.8 68 47.1
AagrBONN_evm.TU.Sc2ySwM_228.4815 Anthoceros agrestis HOM05D007451 ORTHO05D009399 4.9e-08 62.0 148 28.4
MBI06_g46402_MAGBIO Magnolia biondii HOM05D000482 ORTHO05D000349 3.2e-07 59.3 108 36.1
Hund21547 Selenicereus undatus HOM05D007451 ORTHO05D009399 3.2e-07 59.3 140 34.3
Hund21366 Selenicereus undatus HOM05D007451 ORTHO05D009399 4.1e-07 58.9 140 34.3
Os02g0244000 Oryza sativa ssp. japonica HOM05D007451 ORTHO05D009399 2.1e-06 56.6 114 32.5
Ah.16g109120 Amaranthus hybridus HOM05D007451 ORTHO05D009399 3.5e-06 55.8 73 46.6


User provided reference genes

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