Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G30440 Arabidopsis lyrata HOM05D005716 ORTHO05D007885 9.8e-150 533.5 278 100.0
AT2G34470 Arabidopsis thaliana HOM05D005716 ORTHO05D007885 1.3e-146 523.1 278 98.2
Carub.0004s1614 Capsella rubella HOM05D005716 ORTHO05D007885 3.6e-144 515.0 259 96.9
CARHR128550 Cardamine hirsuta HOM05D005716 ORTHO05D007885 5.2e-143 511.1 278 95.3
Thhalv10017058m.g Eutrema salsugineum HOM05D005716 ORTHO05D007885 5.7e-142 507.7 259 95.8
Sp4g16740 Schrenkiella parvula HOM05D005716 ORTHO05D007885 3.1e-140 501.9 275 92.7
C04p63810 Brassica napus HOM05D005716 ORTHO05D007885 2.7e-139 498.8 278 92.8
BraA04t18144Z Brassica rapa HOM05D005716 ORTHO05D007885 3.5e-139 498.4 278 92.8
BcaB06g28772 Brassica carinata HOM05D005716 ORTHO05D007885 4.5e-139 498.0 278 93.9
BolC4t27848H Brassica oleracea HOM05D005716 ORTHO05D007885 6.6e-138 494.2 278 92.1
Aa31LG10G6910 Aethionema arabicum HOM05D005716 ORTHO05D007885 1.1e-137 493.4 258 93.4
THA.LOC104812667 Tarenaya hassleriana HOM05D005716 ORTHO05D007885 3.6e-136 488.4 278 91.7
Ciclev10016173m.g Citrus clementina HOM05D005716 ORTHO05D007885 3.4e-134 481.9 259 89.2
Atru.chr10.1272 Acer truncatum HOM05D005716 ORTHO05D007885 9.8e-134 480.3 257 91.1
Sopen02g019750 Solanum pennellii HOM05D005716 ORTHO05D007885 9.8e-134 480.3 250 92.0
Solyc02g070670.4 Solanum lycopersicum HOM05D005716 ORTHO05D007885 2.2e-133 479.2 250 91.6
QL05p058825 Quercus lobata HOM05D005716 ORTHO05D007885 3.7e-133 478.4 253 92.1
PGSC0003DMG400008287 Solanum tuberosum HOM05D005716 ORTHO05D007885 6.4e-133 477.6 250 91.6
Lj1A1186G50 Lonicera japonica HOM05D005716 ORTHO05D007885 1.1e-132 476.9 250 91.2
QL05p058849 Quercus lobata HOM05D005716 ORTHO05D007885 1.1e-132 476.9 253 91.7
EL10Ac8g19740 Beta vulgaris HOM05D005716 ORTHO05D007885 1.9e-132 476.1 256 89.1
TAR627G0480 Trochodendron aralioides HOM05D005716 ORTHO05D007885 1.9e-132 476.1 259 89.6
MD10G1263700 Malus domestica HOM05D005716 ORTHO05D007885 2.4e-132 475.7 250 92.0
DCAR_005122 Daucus carota HOM05D005716 ORTHO05D007885 3.2e-132 475.3 254 90.9
CAN.G650.23 Capsicum annuum HOM05D005716 ORTHO05D007885 9.2e-132 473.8 250 90.4
HanXRQChr08g0230021 Helianthus annuus HOM05D005716 ORTHO05D007885 2.0e-131 472.6 253 90.5
Nitab4.5_0005219g0060 Nicotiana tabacum HOM05D005716 ORTHO05D007885 2.7e-131 472.2 250 90.0
TWI09G1196 Tripterygium wilfordii HOM05D005716 ORTHO05D007885 2.7e-131 472.2 256 89.8
Aqoxy4G00105 Aquilegia oxysepala HOM05D005716 ORTHO05D007885 3.5e-131 471.9 257 88.7
arahy.Tifrunner.gnm1.ann1.16PV68 Arachis hypogaea HOM05D005716 ORTHO05D007885 4.6e-131 471.5 252 89.7
arahy.Tifrunner.gnm1.ann1.MD42KV Arachis hypogaea HOM05D005716 ORTHO05D007885 4.6e-131 471.5 252 89.7
Peaxi162Scf00022g00310 Petunia axillaris HOM05D005716 ORTHO05D007885 4.6e-131 471.5 250 90.4
Thecc.06G152400 Theobroma cacao HOM05D005716 ORTHO05D007885 4.6e-131 471.5 250 90.4
MD05G1285700 Malus domestica HOM05D005716 ORTHO05D007885 6.0e-131 471.1 250 91.2
Sabra02G0185400 Salix brachista HOM05D005716 ORTHO05D007885 7.8e-131 470.7 253 90.5
Nn3g20701 Nelumbo nucifera HOM05D005716 ORTHO05D007885 1.0e-130 470.3 259 87.3
PGR042G3684 Punica granatum HOM05D005716 ORTHO05D007885 1.0e-130 470.3 252 89.7
ECA232G4567 Erigeron canadensis HOM05D005716 ORTHO05D007885 1.3e-130 469.9 252 89.3
Sc05g0006370 Simmondsia chinensis HOM05D005716 ORTHO05D007885 1.3e-130 469.9 253 88.9
CANSAT80G0786 Cannabis sativa HOM05D005716 ORTHO05D007885 1.7e-130 469.5 249 90.0
CiPaw.09G125500 Carya illinoinensis HOM05D005716 ORTHO05D007885 2.3e-130 469.2 251 91.2
Manes.17G068800 Manihot esculenta HOM05D005716 ORTHO05D007885 2.3e-130 469.2 278 86.3
Duzib235G0716 Durio zibethinus HOM05D005716 ORTHO05D007885 3.0e-130 468.8 250 90.8
Lsat_1_v5_gn_1_96721 Lactuca sativa HOM05D005716 ORTHO05D007885 3.0e-130 468.8 252 90.1
Eucgr.E02383 Eucalyptus grandis HOM05D005716 ORTHO05D007885 5.0e-130 468.0 250 89.6
RcHm_v2.0_Chr5g0013751 Rosa chinensis HOM05D005716 ORTHO05D007885 5.0e-130 468.0 249 90.8
Prupe.4G079000 Prunus persica HOM05D005716 ORTHO05D007885 6.6e-130 467.6 255 89.4
Gohir.D10G040400 Gossypium hirsutum HOM05D005716 ORTHO05D007885 8.6e-130 467.2 251 91.2
CsaV3_1G032590 Cucumis sativus L. HOM05D005716 ORTHO05D007885 1.1e-129 466.8 253 89.3
MBI07_g26370_MAGBIO Magnolia biondii HOM05D005716 ORTHO05D007885 1.1e-129 466.8 252 90.1
SGA_v2.0_scaffold106G30642 Striga asiatica HOM05D005716 ORTHO05D007885 1.1e-129 466.8 251 89.6
Eucgr.E02408 Eucalyptus grandis HOM05D005716 ORTHO05D007885 1.5e-129 466.5 250 89.2
CDE02G4127 Ceratophyllum demersum HOM05D005716 ORTHO05D007885 1.9e-129 466.1 253 88.5
Gorai.011G042600 Gossypium raimondii HOM05D005716 ORTHO05D007885 1.9e-129 466.1 251 90.8
VMungo0251G2847 Vigna mungo HOM05D005716 ORTHO05D007885 1.9e-129 466.1 254 90.2
Cc09_g09370 Coffea canephora HOM05D005716 ORTHO05D007885 2.5e-129 465.7 250 89.2
MBI07_g15285_MAGBIO Magnolia biondii HOM05D005716 ORTHO05D007885 2.5e-129 465.7 252 89.7
SalBow7G1512 Salvia bowleyana HOM05D005716 ORTHO05D007885 2.5e-129 465.7 251 88.8
FvH4_3g05780 Fragaria vesca HOM05D005716 ORTHO05D007885 3.3e-129 465.3 249 90.0
FAN11G1575 Fragaria x ananassa HOM05D005716 ORTHO05D007885 3.3e-129 465.3 249 90.0
FAN21G0047 Fragaria x ananassa HOM05D005716 ORTHO05D007885 3.3e-129 465.3 249 90.0
Rhsim07G0173200 Rhododendron simsii HOM05D005716 ORTHO05D007885 3.3e-129 465.3 263 86.7
GSVIVG01021429001 Vitis vinifera HOM05D005716 ORTHO05D007885 4.3e-129 464.9 249 89.2
Actinidia07685 Actinidia chinensis HOM05D005716 ORTHO05D007885 7.3e-129 464.2 255 90.2
Phvul.002G193800 Phaseolus vulgaris HOM05D005716 ORTHO05D007885 7.3e-129 464.2 249 90.8
FAN16G2159 Fragaria x ananassa HOM05D005716 ORTHO05D007885 1.6e-128 463.0 249 89.6
unitig_32.g11441 Utricularia gibba HOM05D005716 ORTHO05D007885 1.6e-128 463.0 246 89.4
Lalb_Chr07g0188621 Lupinus albus HOM05D005716 ORTHO05D007885 2.1e-128 462.6 251 89.6
Potri.002G243500 Populus trichocarpa HOM05D005716 ORTHO05D007885 2.1e-128 462.6 253 89.3
Potri.002G243700 Populus trichocarpa HOM05D005716 ORTHO05D007885 2.1e-128 462.6 253 89.3
Dinv32271 Davidia involucrata HOM05D005716 ORTHO05D007885 6.2e-128 461.1 242 92.1
AUR62027525 Chenopodium quinoa HOM05D005716 ORTHO05D007885 8.0e-128 460.7 245 91.4
Migut.H01369 Erythranthe guttata HOM05D005716 ORTHO05D007885 1.1e-127 460.3 248 89.1
TPR.G4903 Trifolium pratense HOM05D005716 ORTHO05D007885 1.1e-127 460.3 249 90.0
Ca_18267_v3 Cicer arietinum L. HOM05D005716 ORTHO05D007885 1.4e-127 459.9 256 88.3
COL.COLO4_31094 Corchorus olitorius HOM05D005716 ORTHO05D007885 1.8e-127 459.5 250 88.8
TWI09G0986 Tripterygium wilfordii HOM05D005716 ORTHO05D007885 1.8e-127 459.5 244 91.4
ATR0585G042 Amborella trichopoda HOM05D005716 ORTHO05D007885 2.3e-127 459.1 256 87.1
MSTRG.13250 Avicennia marina HOM05D005716 ORTHO05D007885 2.3e-127 459.1 251 87.3
Glyma.08G084800 Glycine max HOM05D005716 ORTHO05D007885 2.3e-127 459.1 250 89.2
PSO017G0333 Papaver somniferum HOM05D005716 ORTHO05D007885 2.3e-127 459.1 246 89.4
Medtr4g096770 Medicago truncatula HOM05D005716 ORTHO05D007885 5.2e-127 458.0 249 89.6
TWI53G0431 Tripterygium wilfordii HOM05D005716 ORTHO05D007885 6.8e-127 457.6 245 89.4
Oeu030916.2 Olea europaea HOM05D005716 ORTHO05D007885 3.4e-126 455.3 273 82.1
SEGI_04817 Sequoiadendron giganteum HOM05D005716 ORTHO05D007885 3.4e-126 455.3 250 87.2
Psat7g090160 Pisum sativum HOM05D005716 ORTHO05D007885 5.8e-126 454.5 247 89.1
HPP92_010050 Vanilla planifolia HOM05D005716 ORTHO05D007885 3.2e-124 448.7 249 86.7
Sed0010647 Sechium edule HOM05D005716 ORTHO05D007885 1.0e-122 443.7 253 85.8
Mapoly0128s0016 Marchantia polymorpha HOM05D005716 ORTHO05D007885 3.0e-122 442.2 251 84.1
PSO478G1410 Papaver somniferum HOM05D005716 ORTHO05D007885 3.3e-121 438.7 248 85.9
SMO353G0068 Selaginella moellendorffii HOM05D005716 ORTHO05D007885 5.2e-119 431.4 256 82.0
Os05g0565200 Oryza sativa ssp. japonica HOM05D005716 ORTHO05D007885 8.9e-119 430.6 254 83.9
Cpa.g.sc166.24 Carica papaya HOM05D005716 ORTHO05D007885 5.8e-118 427.9 290 80.7
MELO3C002721.2 Cucumis melo HOM05D005716 ORTHO05D007885 3.7e-117 425.2 226 91.6
Zm00001eb343840 Zea mays HOM05D005716 ORTHO05D007885 5.4e-116 421.4 228 89.9
Pp3c24_19130 Physcomitrium patens HOM05D005716 ORTHO05D007885 1.6e-115 419.9 244 82.0
vmacro17882 Vaccinium macrocarpon HOM05D005716 ORTHO05D007885 2.1e-115 419.5 353 64.3
AagrBONN_evm.TU.Sc2ySwM_117.3588 Anthoceros agrestis HOM05D005716 ORTHO05D007885 8.6e-114 414.1 243 82.3
ClCG03G007040 Citrullus lanatus HOM05D005716 ORTHO05D007885 2.1e-112 409.5 250 81.2
CBR_g38955 Chara braunii HOM05D005716 ORTHO05D007885 9.9e-110 400.6 250 76.4
CSS0037137 Camellia sinensis var. sinensis HOM05D005716 ORTHO05D007885 1.2e-104 383.6 217 87.6
Haze_05577 Corylus avellana HOM05D005716 ORTHO05D007885 5.1e-98 361.7 191 92.7
Hma1.2p1_0286F.1_g114150 Hydrangea macrophylla HOM05D005716 ORTHO05D007885 7.6e-94 347.8 189 89.9
MCO04G141 Micromonas commoda HOM05D005716 ORTHO05D007885 3.2e-92 342.4 256 66.8
RcHm_v2.0_Chr5g0013741 Rosa chinensis HOM05D005716 ORTHO05D007885 1.3e-85 320.5 171 91.2
Nitab4.5_0001655g0090 Nicotiana tabacum HOM05D005716 ORTHO05D007885 3.8e-85 318.9 171 90.1
A04p06350 Brassica napus HOM05D005716 ORTHO05D007885 2.1e-83 313.2 183 87.4
PSO017G6742 Papaver somniferum HOM05D005716 ORTHO05D007885 2.1e-83 313.2 168 91.1
Hund21524 Selenicereus undatus HOM05D005716 ORTHO05D007885 2.1e-83 313.2 181 85.6
Gohir.A10G039600 Gossypium hirsutum HOM05D005716 ORTHO05D007885 3.0e-82 309.3 163 91.4
PRCOL_00002216 Prasinoderma coloniale HOM05D005716 ORTHO05D007885 2.7e-75 286.2 185 75.7
FAN17G1884 Fragaria x ananassa HOM05D005716 ORTHO05D007885 2.3e-74 283.1 164 86.0
BcaC02g09191 Brassica carinata HOM05D005716 ORTHO05D031863 1.9e-73 280.0 145 96.6
FAN23G0273 Fragaria x ananassa HOM05D005716 ORTHO05D007885 2.5e-73 279.6 164 83.5
FAN25G2810 Fragaria x ananassa HOM05D005716 ORTHO05D007885 7.4e-73 278.1 164 84.8
C04p39880 Brassica napus HOM05D005716 ORTHO05D007885 6.3e-72 275.0 147 94.6
BolC4t25559H Brassica oleracea HOM05D005716 ORTHO05D007885 2.4e-71 273.1 155 91.0
BraA04t16339Z Brassica rapa HOM05D005716 ORTHO05D007885 3.4e-70 269.2 155 89.7
FAN02G1132 Fragaria x ananassa HOM05D005716 ORTHO05D007885 7.2e-68 261.5 213 66.7
FAN25G0382 Fragaria x ananassa HOM05D005716 ORTHO05D007885 1.6e-67 260.4 171 76.0
AUR62030221 Chenopodium quinoa HOM05D005716 ORTHO05D007885 6.7e-66 255.0 146 84.2
RcHm_v2.0_Chr5g0013721 Rosa chinensis HOM05D005716 ORTHO05D007885 3.7e-64 249.2 156 79.5
RcHm_v2.0_Chr5g0013731 Rosa chinensis HOM05D005716 ORTHO05D007885 7.9e-59 231.5 158 74.7
Haze_26810 Corylus avellana HOM05D005716 ORTHO05D164461 3.2e-52 209.5 191 55.5
FAN02G0019 Fragaria x ananassa HOM05D005716 ORTHO05D007885 5.5e-52 208.8 151 72.2
Dinv30725 Davidia involucrata HOM05D005716 ORTHO05D007885 6.1e-51 205.3 141 74.5
MSTRG.14769 Avicennia marina HOM05D005716 ORTHO05D007885 8.3e-40 168.3 93 86.0
AUR62030223 Chenopodium quinoa HOM05D005716 ORTHO05D044022 3.1e-39 166.4 167 56.9
FAN08G0336 Fragaria x ananassa HOM05D005716 ORTHO05D044022 4.1e-31 139.4 76 90.8
arahy.Tifrunner.gnm1.ann1.8LN2Z6 Arachis hypogaea HOM05D005716 ORTHO05D087704 4.7e-27 125.9 190 44.2
VMungo1309G0118 Vigna mungo HOM05D005716 ORTHO05D437644 2.3e-26 123.6 71 84.5
Dinv30726 Davidia involucrata HOM05D005716 ORTHO05D014961 4.0e-26 122.9 87 78.2
CAN.G94.3 Capsicum annuum HOM05D005716 ORTHO05D115662 6.3e-24 115.5 93 62.4
C05p14270 Brassica napus HOM05D013073 ORTHO05D014961 2.5e-20 103.6 55 87.3
C06p00300 Brassica napus HOM05D013073 ORTHO05D014961 7.3e-20 102.1 55 85.5
BcaC08g42818 Brassica carinata HOM05D013073 ORTHO05D014961 3.1e-18 96.7 50 88.0
A04p26400 Brassica napus HOM05D005716 ORTHO05D099386 2.2e-16 90.5 46 91.3


User provided reference genes

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