Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G30210 Arabidopsis lyrata HOM05D004767 ORTHO05D005674 1.3e-183 646.4 342 100.0
AT2G34260 Arabidopsis thaliana HOM05D004767 ORTHO05D005674 2.8e-154 548.9 363 82.4
Carub.0004s1593 Capsella rubella HOM05D004767 ORTHO05D005674 1.4e-150 536.6 363 80.7
CARHR128360 Cardamine hirsuta HOM05D004767 ORTHO05D005674 5.6e-147 524.6 363 79.1
Aa31LG9G14020 Aethionema arabicum HOM05D004767 ORTHO05D005674 1.1e-142 510.4 363 76.9
Sp4g16550 Schrenkiella parvula HOM05D004767 ORTHO05D005674 2.4e-142 509.2 311 80.7
BcaC02g11487 Brassica carinata HOM05D004767 ORTHO05D005674 5.4e-142 508.1 311 81.4
BcaB06g28745 Brassica carinata HOM05D004767 ORTHO05D005674 7.1e-142 507.7 311 80.7
BraA04t18130Z Brassica rapa HOM05D004767 ORTHO05D005674 9.2e-142 507.3 311 81.4
BcaB02g09562 Brassica carinata HOM05D004767 ORTHO05D005674 2.1e-141 506.1 310 81.0
C04p63650 Brassica napus HOM05D004767 ORTHO05D005674 2.1e-141 506.1 311 80.7
C04p14860 Brassica napus HOM05D004767 ORTHO05D005674 2.7e-141 505.8 311 81.0
BolC4t23059H Brassica oleracea HOM05D004767 ORTHO05D005674 1.0e-140 503.8 311 80.7
A05p11370 Brassica napus HOM05D004767 ORTHO05D005674 3.0e-140 502.3 311 80.4
BraA05t20086Z Brassica rapa HOM05D004767 ORTHO05D005674 3.0e-140 502.3 311 80.4
THA.LOC104816808 Tarenaya hassleriana HOM05D004767 ORTHO05D005674 1.8e-137 493.0 365 71.2
THA.LOC104820618 Tarenaya hassleriana HOM05D004767 ORTHO05D005674 3.8e-135 485.3 363 70.0
Thhalv10016919m.g Eutrema salsugineum HOM05D004767 ORTHO05D005674 2.1e-125 453.0 311 74.6
Cpa.g.sc365.7 Carica papaya HOM05D004767 ORTHO05D005674 1.3e-114 417.2 365 60.8
Peaxi162Scf00431g00415 Petunia axillaris HOM05D004767 ORTHO05D005674 8.1e-114 414.5 365 59.2
MSTRG.16702 Avicennia marina HOM05D004767 ORTHO05D005674 6.9e-113 411.4 364 58.8
Glyma.10G129800 Glycine max HOM05D004767 ORTHO05D005674 6.9e-113 411.4 364 58.5
PGSC0003DMG400003462 Solanum tuberosum HOM05D004767 ORTHO05D005674 6.9e-113 411.4 365 58.4
Eucgr.H00074 Eucalyptus grandis HOM05D004767 ORTHO05D005674 2.0e-112 409.8 363 59.8
Sopen02g012180 Solanum pennellii HOM05D004767 ORTHO05D005674 5.8e-112 408.3 365 57.8
TAR381G0314 Trochodendron aralioides HOM05D004767 ORTHO05D005674 5.8e-112 408.3 364 60.4
Oeu010411.1 Olea europaea HOM05D004767 ORTHO05D005674 1.7e-111 406.8 364 58.5
Nn6g31627 Nelumbo nucifera HOM05D004767 ORTHO05D005674 2.2e-111 406.4 365 59.2
SGA_v2.0_scaffold108G30887 Striga asiatica HOM05D004767 ORTHO05D005674 2.2e-111 406.4 364 58.2
Solyc02g038750.3 Solanum lycopersicum HOM05D004767 ORTHO05D005674 2.9e-111 406.0 365 57.5
Lalb_Chr05g0214971 Lupinus albus HOM05D004767 ORTHO05D005674 4.9e-111 405.2 364 59.9
QL10p048860 Quercus lobata HOM05D004767 ORTHO05D005674 8.4e-111 404.4 363 58.7
TAR625G0043 Trochodendron aralioides HOM05D004767 ORTHO05D005674 2.4e-110 402.9 365 58.4
CiPaw.03G094400 Carya illinoinensis HOM05D004767 ORTHO05D005674 4.2e-110 402.1 364 58.2
Gorai.012G034000 Gossypium raimondii HOM05D004767 ORTHO05D005674 4.2e-110 402.1 366 60.7
Medtr4g111810 Medicago truncatula HOM05D004767 ORTHO05D005674 5.5e-110 401.7 369 57.5
arahy.Tifrunner.gnm1.ann1.AK1NBZ Arachis hypogaea HOM05D004767 ORTHO05D005674 9.3e-110 401.0 366 62.3
Duzib264G0649 Durio zibethinus HOM05D004767 ORTHO05D005674 9.3e-110 401.0 365 58.6
Lalb_Chr09g0324851 Lupinus albus HOM05D004767 ORTHO05D005674 1.2e-109 400.6 364 57.1
TPR.G18695 Trifolium pratense HOM05D004767 ORTHO05D005674 1.6e-109 400.2 370 59.5
MD12G1063000 Malus domestica HOM05D004767 ORTHO05D005674 2.1e-109 399.8 363 58.4
Potri.017G120100 Populus trichocarpa HOM05D004767 ORTHO05D005674 3.5e-109 399.1 364 56.9
Psat1g185000 Pisum sativum HOM05D004767 ORTHO05D005674 4.6e-109 398.7 370 59.5
Potri.004G095000 Populus trichocarpa HOM05D004767 ORTHO05D005674 6.0e-109 398.3 365 57.0
FAN09G1063 Fragaria x ananassa HOM05D004767 ORTHO05D005674 1.0e-108 397.5 363 58.1
Manes.02G116500 Manihot esculenta HOM05D004767 ORTHO05D005674 1.0e-108 397.5 366 59.0
Prupe.7G070600 Prunus persica HOM05D004767 ORTHO05D005674 1.3e-108 397.1 363 57.9
RcHm_v2.0_Chr3g0480691 Rosa chinensis HOM05D004767 ORTHO05D005674 1.3e-108 397.1 364 58.0
FAN02G2069 Fragaria x ananassa HOM05D004767 ORTHO05D005674 1.8e-108 396.7 363 58.1
Gohir.D04G022900 Gossypium hirsutum HOM05D004767 ORTHO05D005674 1.8e-108 396.7 366 61.5
Nitab4.5_0000235g0120 Nicotiana tabacum HOM05D004767 ORTHO05D005674 1.8e-108 396.7 365 57.3
MD14G1063600 Malus domestica HOM05D004767 ORTHO05D005674 2.3e-108 396.4 365 60.3
Phvul.011G028400 Phaseolus vulgaris HOM05D004767 ORTHO05D005674 2.3e-108 396.4 364 57.1
VMungo1127G0990 Vigna mungo HOM05D004767 ORTHO05D005674 2.3e-108 396.4 364 56.3
Thecc.01G130700 Theobroma cacao HOM05D004767 ORTHO05D005674 3.0e-108 396.0 309 64.7
TWI73G0530 Tripterygium wilfordii HOM05D004767 ORTHO05D005674 3.0e-108 396.0 363 57.6
FAN14G1715 Fragaria x ananassa HOM05D004767 ORTHO05D005674 5.1e-108 395.2 363 57.9
TPR.G26773 Trifolium pratense HOM05D004767 ORTHO05D005674 5.1e-108 395.2 371 57.7
FvH4_6g22900 Fragaria vesca HOM05D004767 ORTHO05D005674 8.7e-108 394.4 363 57.9
Gohir.A05G385700 Gossypium hirsutum HOM05D004767 ORTHO05D005674 8.7e-108 394.4 366 61.2
PGR102G1152 Punica granatum HOM05D004767 ORTHO05D005674 3.3e-107 392.5 364 58.0
GSVIVG01017458001 Vitis vinifera HOM05D004767 ORTHO05D005674 4.3e-107 392.1 365 57.8
Hund21306 Selenicereus undatus HOM05D004767 ORTHO05D005674 7.4e-107 391.3 307 64.2
Glyma.12G025800 Glycine max HOM05D004767 ORTHO05D005674 9.6e-107 391.0 364 56.9
arahy.Tifrunner.gnm1.ann1.BE8FK9 Arachis hypogaea HOM05D004767 ORTHO05D005674 1.3e-106 390.6 415 56.4
CANSAT54G2063 Cannabis sativa HOM05D004767 ORTHO05D005674 1.6e-106 390.2 322 59.9
GSVIVG01020926001 Vitis vinifera HOM05D004767 ORTHO05D005674 8.2e-106 387.9 365 57.5
EL10Ac3g07307 Beta vulgaris HOM05D004767 ORTHO05D005674 1.1e-105 387.5 363 59.0
Ca_02533_v3 Cicer arietinum L. HOM05D004767 ORTHO05D005674 1.1e-105 387.5 368 57.9
Medtr4g077783 Medicago truncatula HOM05D004767 ORTHO05D005674 1.4e-105 387.1 311 62.1
HanXRQChr15g0489741 Helianthus annuus HOM05D004767 ORTHO05D005674 3.1e-105 386.0 364 58.2
unitig_61.g26025 Utricularia gibba HOM05D004767 ORTHO05D005674 3.1e-105 386.0 364 54.9
EL10Ac8g19950 Beta vulgaris HOM05D004767 ORTHO05D005674 6.9e-105 384.8 308 62.3
AUR62012542 Chenopodium quinoa HOM05D004767 ORTHO05D005674 1.2e-104 384.0 298 65.1
Nitab4.5_0006401g0010 Nicotiana tabacum HOM05D004767 ORTHO05D005674 1.5e-104 383.6 346 58.4
Cc07_g12190 Coffea canephora HOM05D004767 ORTHO05D005674 2.0e-104 383.3 298 65.8
Hma1.2p1_0085F.1_g044390 Hydrangea macrophylla HOM05D004767 ORTHO05D005674 2.0e-104 383.3 368 59.5
Lj1g0021179 Lotus japonicus HOM05D004767 ORTHO05D005674 3.4e-104 382.5 367 54.8
COL.COLO4_35713 Corchorus olitorius HOM05D004767 ORTHO05D005674 5.8e-104 381.7 364 56.9
ECA233G4977 Erigeron canadensis HOM05D004767 ORTHO05D005674 2.2e-103 379.8 364 58.0
Migut.B00408 Erythranthe guttata HOM05D004767 ORTHO05D005674 3.8e-103 379.0 354 55.1
Lj4C240T4 Lonicera japonica HOM05D004767 ORTHO05D005674 6.5e-103 378.3 364 58.2
Sed0020265 Sechium edule HOM05D004767 ORTHO05D005674 1.9e-102 376.7 310 61.3
Sed0012135 Sechium edule HOM05D004767 ORTHO05D005674 7.1e-102 374.8 313 61.3
Atru.chr5.1742 Acer truncatum HOM05D004767 ORTHO05D005674 2.1e-101 373.2 364 56.9
DCAR_019301 Daucus carota HOM05D004767 ORTHO05D005674 3.5e-101 372.5 319 59.9
CDE02G0197 Ceratophyllum demersum HOM05D004767 ORTHO05D005674 1.8e-100 370.2 369 59.6
PSO017G2362 Papaver somniferum HOM05D004767 ORTHO05D005674 1.1e-99 367.5 364 53.8
Sabra17G0099100 Salix brachista HOM05D004767 ORTHO05D005674 1.1e-99 367.5 371 54.4
ClCG10G013460 Citrullus lanatus HOM05D004767 ORTHO05D005674 1.9e-99 366.7 313 59.1
Sc03g0004110 Simmondsia chinensis HOM05D004767 ORTHO05D005674 1.9e-99 366.7 365 58.4
RcHm_v2.0_Chr4g0410631 Rosa chinensis HOM05D004767 ORTHO05D005674 3.3e-99 365.9 344 55.8
CDE08G0085 Ceratophyllum demersum HOM05D004767 ORTHO05D005674 5.7e-99 365.2 306 61.1
HPP92_003941 Vanilla planifolia HOM05D004767 ORTHO05D005674 4.8e-98 362.1 365 57.5
Aqoxy6G02991 Aquilegia oxysepala HOM05D004767 ORTHO05D005674 6.3e-98 361.7 365 53.7
COL.COLO4_38041 Corchorus olitorius HOM05D004767 ORTHO05D005674 3.4e-96 355.9 328 58.5
MELO3C026614.2 Cucumis melo HOM05D004767 ORTHO05D005674 3.4e-96 355.9 303 59.1
vmacro18476 Vaccinium macrocarpon HOM05D004767 ORTHO05D005674 4.5e-96 355.5 288 64.2
SalBow6G2358 Salvia bowleyana HOM05D004767 ORTHO05D005674 1.4e-94 350.5 372 53.0
SalBow6G5765 Salvia bowleyana HOM05D004767 ORTHO05D005674 3.2e-94 349.4 372 52.7
SalBow2G0232 Salvia bowleyana HOM05D004767 ORTHO05D005674 1.4e-92 344.0 349 54.2
Actinidia28754 Actinidia chinensis HOM05D004767 ORTHO05D005674 6.7e-92 341.7 319 58.0
TAR625G0966 Trochodendron aralioides HOM05D004767 ORTHO05D005674 6.7e-92 341.7 338 55.3
Psat1g210160 Pisum sativum HOM05D004767 ORTHO05D005674 5.7e-91 338.6 281 61.2
Rhsim08G0026000 Rhododendron simsii HOM05D004767 ORTHO05D005674 6.3e-90 335.1 392 49.0
A04p26260 Brassica napus HOM05D004767 ORTHO05D005674 1.1e-89 334.3 217 76.0
Lsat_1_v5_gn_8_114040 Lactuca sativa HOM05D004767 ORTHO05D005674 3.1e-89 332.8 360 53.3
Os07g0660700 Oryza sativa ssp. japonica HOM05D004767 ORTHO05D005674 1.2e-88 330.9 356 50.6
PSO170G0853 Papaver somniferum HOM05D004767 ORTHO05D005674 1.0e-87 327.8 307 55.7
Zm00001eb349300 Zea mays HOM05D004767 ORTHO05D005674 3.8e-87 325.9 359 49.6
CSS0049016 Camellia sinensis var. sinensis HOM05D004767 ORTHO05D005674 5.0e-87 325.5 278 61.2
CsaV3_3G043180 Cucumis sativus L. HOM05D004767 ORTHO05D005674 3.2e-86 322.8 303 55.1
Ah.09g236950 Amaranthus hybridus HOM05D004767 ORTHO05D005674 1.8e-84 317.0 293 56.3
Glyma.11G099900 Glycine max HOM05D004767 ORTHO05D005674 5.7e-83 312.0 291 55.0
Lj3A907T66 Lonicera japonica HOM05D004767 ORTHO05D005674 3.4e-80 302.8 352 47.2
Haze_03669 Corylus avellana HOM05D004767 ORTHO05D005674 7.2e-78 295.0 315 52.1
AUR62014654 Chenopodium quinoa HOM05D004767 ORTHO05D005674 1.0e-76 291.2 286 56.3
Mapoly0040s0029 Marchantia polymorpha HOM05D004767 ORTHO05D005674 1.8e-76 290.4 310 47.1
Phvul.005G015600 Phaseolus vulgaris HOM05D004767 ORTHO05D005674 8.8e-76 288.1 309 50.8
AagrBONN_evm.TU.Sc2ySwM_344.1647 Anthoceros agrestis HOM05D004767 ORTHO05D005674 2.6e-75 286.6 305 47.5
Dinv40217 Davidia involucrata HOM05D004767 ORTHO05D005674 9.7e-75 284.6 239 61.5
Phvul.005G015700 Phaseolus vulgaris HOM05D004767 ORTHO05D005674 9.7e-75 284.6 310 50.0
AUR62044118 Chenopodium quinoa HOM05D004767 ORTHO05D005674 2.6e-72 276.6 277 56.3
SMO364G0336 Selaginella moellendorffii HOM05D004767 ORTHO05D005674 1.8e-68 263.8 318 44.7
Cfa006688 Carpinus fangiana HOM05D004767 ORTHO05D005674 2.6e-67 260.0 267 54.7
CBR_g37537 Chara braunii HOM05D004767 ORTHO05D005674 1.1e-54 218.0 271 42.4
Medtr1g076780 Medicago truncatula HOM05D004767 ORTHO05D005674 4.7e-53 212.6 156 67.3
MCO07G146 Micromonas commoda HOM05D004767 ORTHO05D005674 1.2e-48 198.0 301 37.2
ATR0680G041 Amborella trichopoda HOM05D004767 ORTHO05D005674 1.2e-45 188.0 159 56.6
BolC4t27833H Brassica oleracea HOM05D004767 ORTHO05D005674 2.3e-44 183.7 290 44.5
SHI13610 Sapria himalayana HOM05D004767 ORTHO05D005674 1.7e-39 167.5 236 41.1
Glyma.20G080900 Glycine max HOM05D004767 ORTHO05D005674 8.6e-39 165.2 131 61.1
Pp3c5_17020 Physcomitrium patens HOM05D004767 ORTHO05D005674 5.6e-38 162.5 286 35.7
Cre02.g113250 Chlamydomonas reinhardtii HOM05D004767 ORTHO05D005674 6.8e-36 155.6 254 37.4
Psat6g227720 Pisum sativum HOM05D004767 ORTHO05D005674 2.2e-34 150.6 152 53.3
Psat6g227760 Pisum sativum HOM05D004767 ORTHO05D005674 9.2e-33 145.2 149 53.7
SEGI_28078 Sequoiadendron giganteum HOM05D004767 ORTHO05D005674 6.0e-32 142.5 143 52.4
Phvul.011G028501 Phaseolus vulgaris HOM05D004767 ORTHO05D005674 1.0e-31 141.7 117 59.8
QL07p001807 Quercus lobata HOM05D004767 ORTHO05D005674 1.0e-31 141.7 153 49.0
PRCOL_00000722 Prasinoderma coloniale HOM05D004767 ORTHO05D005674 2.3e-28 130.6 293 32.1
Oeu036465.1 Olea europaea HOM05D004767 ORTHO05D005674 8.9e-28 128.6 145 50.3
ATR0231G001 Amborella trichopoda HOM05D004767 ORTHO05D005674 1.5e-22 111.3 90 64.4
Sabra17G0099200 Salix brachista HOM05D004767 ORTHO05D005674 3.3e-22 110.2 78 66.7
SEGI_20710 Sequoiadendron giganteum HOM05D004767 ORTHO05D005674 8.4e-18 95.5 96 51.0
SEGI_27353 Sequoiadendron giganteum HOM05D004767 ORTHO05D005674 1.6e-13 81.3 58 62.1
Lsat_1_v5_gn_6_103760 Lactuca sativa HOM05D004767 ORTHO05D005674 1.2e-11 75.1 66 54.5
Cc11_g01130 Coffea canephora HOM05D004767 ORTHO05D005674 7.6e-11 72.4 45 71.1
vmacro07517 Vaccinium macrocarpon HOM05D004767 ORTHO05D005674 3.8e-10 70.1 52 63.5
Phvul.011G028300 Phaseolus vulgaris HOM05D004767 ORTHO05D005674 1.4e-09 68.2 55 60.0
GSVIVG01020113001 Vitis vinifera HOM05D004767 ORTHO05D005674 1.9e-09 67.8 53 62.3
Actinidia09820 Actinidia chinensis HOM05D004767 ORTHO05D005674 1.2e-08 65.1 56 55.4
Haze_27084 Corylus avellana HOM05D002303 ORTHO05D007639 7.8e-08 62.4 293 22.9
Cc11_g01140 Coffea canephora HOM05D004767 ORTHO05D005674 1.3e-07 61.6 43 62.8
AUR62020514 Chenopodium quinoa HOM05D005323 ORTHO05D006820 1.5e-06 58.2 178 25.8


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