Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G29060 Arabidopsis lyrata HOM05D005475 ORTHO05D006575 2.2e-48 195.3 99 100.0
AT2G33390 Arabidopsis thaliana HOM05D005475 ORTHO05D006575 1.8e-45 185.7 99 96.0
Thhalv10017471m.g Eutrema salsugineum HOM05D005475 ORTHO05D006575 8.8e-45 183.3 99 94.9
Carub.0004s1502 Capsella rubella HOM05D005475 ORTHO05D006575 1.7e-43 179.1 100 91.0
Sp4g15710 Schrenkiella parvula HOM05D005475 ORTHO05D006575 4.1e-42 174.5 99 87.9
CARHR127400 Cardamine hirsuta HOM05D005475 ORTHO05D006575 1.9e-39 165.6 100 88.0
Aa31LG5G3900 Aethionema arabicum HOM05D005475 ORTHO05D006575 3.0e-37 158.3 99 79.8
BcaB02g10558 Brassica carinata HOM05D005475 ORTHO05D006575 6.8e-37 157.1 102 82.4
Aa31LG1G20410 Aethionema arabicum HOM05D005475 ORTHO05D006575 1.8e-34 149.1 99 74.7
A05p12130 Brassica napus HOM05D005475 ORTHO05D006575 9.2e-34 146.7 105 77.1
BraA05t20157Z Brassica rapa HOM05D005475 ORTHO05D006575 1.2e-33 146.4 106 76.4
C04p15700 Brassica napus HOM05D005475 ORTHO05D006575 1.0e-32 143.3 105 77.1
BolC4t23138H Brassica oleracea HOM05D005475 ORTHO05D006575 1.0e-32 143.3 105 77.1
BcaC02g11426 Brassica carinata HOM05D005475 ORTHO05D006575 3.8e-32 141.4 104 76.0
THA.LOC104816000 Tarenaya hassleriana HOM05D005475 ORTHO05D006575 8.9e-29 130.2 100 65.0
TWI73G1305 Tripterygium wilfordii HOM05D005475 ORTHO05D006575 2.0e-25 119.0 99 57.6
A03p18710 Brassica napus HOM05D005475 ORTHO05D006575 2.7e-25 118.6 100 66.0
C03p21860 Brassica napus HOM05D005475 ORTHO05D006575 1.0e-24 116.7 100 67.0
BolC3t14568H Brassica oleracea HOM05D005475 ORTHO05D006575 1.0e-24 116.7 100 67.0
BcaB06g28682 Brassica carinata HOM05D005475 ORTHO05D006575 1.7e-24 115.9 104 62.5
BcaC01g05844 Brassica carinata HOM05D005475 ORTHO05D006575 3.9e-24 114.8 99 65.7
BcaC02g07831 Brassica carinata HOM05D005475 ORTHO05D006575 5.0e-24 114.4 103 64.1
C04p62850 Brassica napus HOM05D005475 ORTHO05D006575 5.0e-24 114.4 103 64.1
BolC4t27768H Brassica oleracea HOM05D005475 ORTHO05D006575 5.0e-24 114.4 103 64.1
BraA03t11131Z Brassica rapa HOM05D005475 ORTHO05D006575 5.0e-24 114.4 100 65.0
Phvul.007G271300 Phaseolus vulgaris HOM05D005475 ORTHO05D006575 8.6e-24 113.6 99 57.6
A04p25690 Brassica napus HOM05D005475 ORTHO05D006575 1.9e-23 112.5 99 62.6
COL.COLO4_15946 Corchorus olitorius HOM05D005475 ORTHO05D006575 1.9e-23 112.5 99 53.5
BraA04t18073Z Brassica rapa HOM05D005475 ORTHO05D006575 8.0e-22 107.1 99 59.6
Glyma.10G136600 Glycine max HOM05D005475 ORTHO05D006575 1.1e-21 106.7 98 56.1
Cfa014769 Carpinus fangiana HOM05D005475 ORTHO05D006575 1.4e-21 106.3 100 52.0
GSVIVG01027899001 Vitis vinifera HOM05D005475 ORTHO05D006575 1.4e-21 106.3 91 57.1
Gorai.005G053100 Gossypium raimondii HOM05D005475 ORTHO05D006575 1.8e-21 105.9 100 56.0
MD16G1224800 Malus domestica HOM05D005475 ORTHO05D006575 1.8e-21 105.9 100 52.0
Gohir.A02G042200 Gossypium hirsutum HOM05D005475 ORTHO05D006575 2.3e-21 105.5 100 55.0
Gohir.D02G047800 Gossypium hirsutum HOM05D005475 ORTHO05D006575 2.3e-21 105.5 100 55.0
Potri.010G067200 Populus trichocarpa HOM05D005475 ORTHO05D006575 6.8e-21 104.0 94 55.3
Prupe.1G046100 Prunus persica HOM05D005475 ORTHO05D006575 8.9e-21 103.6 100 52.0
MD13G1219400 Malus domestica HOM05D005475 ORTHO05D006575 1.2e-20 103.2 100 50.0
CANSAT78G0624 Cannabis sativa HOM05D005475 ORTHO05D006575 1.5e-20 102.8 99 51.5
Lalb_Chr19g0128471 Lupinus albus HOM05D005475 ORTHO05D006575 2.6e-20 102.1 105 55.2
Sed0016324 Sechium edule HOM05D005475 ORTHO05D006575 4.4e-20 101.3 94 51.1
BcaC07g37337 Brassica carinata HOM05D005475 ORTHO05D006575 5.8e-20 100.9 74 77.0
C08p07780 Brassica napus HOM05D005475 ORTHO05D006575 5.8e-20 100.9 74 77.0
BolC8t47626H Brassica oleracea HOM05D005475 ORTHO05D006575 5.8e-20 100.9 74 77.0
Ca_11926_v3 Cicer arietinum L. HOM05D005475 ORTHO05D006575 5.8e-20 100.9 79 63.3
Psat6g107160 Pisum sativum HOM05D005475 ORTHO05D006575 7.5e-20 100.5 78 60.3
Duzib212G0290 Durio zibethinus HOM05D005475 ORTHO05D006575 1.3e-19 99.8 99 50.5
Sed0012950 Sechium edule HOM05D005475 ORTHO05D006575 1.3e-19 99.8 94 50.0
Ciclev10006301m.g Citrus clementina HOM05D005475 ORTHO05D006575 2.2e-19 99.0 99 50.5
Thecc.04G261900 Theobroma cacao HOM05D005475 ORTHO05D006575 2.9e-19 98.6 99 50.5
CiPaw.02G108100 Carya illinoinensis HOM05D005475 ORTHO05D006575 3.7e-19 98.2 94 51.1
Potri.008G170700 Populus trichocarpa HOM05D005475 ORTHO05D006575 1.1e-18 96.7 96 53.1
CiPaw.01G179400 Carya illinoinensis HOM05D005475 ORTHO05D006575 1.9e-18 95.9 100 49.0
Dinv27096 Davidia involucrata HOM05D005475 ORTHO05D006575 4.1e-18 94.7 97 51.5
Glyma.20G201100 Glycine max HOM05D005475 ORTHO05D006575 4.1e-18 94.7 111 50.5
Atru.chr4.1933 Acer truncatum HOM05D005475 ORTHO05D006575 7.0e-18 94.0 105 46.7
ClCG05G004080 Citrullus lanatus HOM05D005475 ORTHO05D006575 1.2e-17 93.2 94 47.9
TAR362G0816 Trochodendron aralioides HOM05D005475 ORTHO05D006575 1.6e-17 92.8 99 50.5
Glyma.10G189800 Glycine max HOM05D005475 ORTHO05D006575 4.6e-17 91.3 111 50.5
Nn3g19747 Nelumbo nucifera HOM05D005475 ORTHO05D006575 4.6e-17 91.3 88 50.0
QL06p020702 Quercus lobata HOM05D005475 ORTHO05D006575 4.6e-17 91.3 93 48.4
CSS0013344 Camellia sinensis var. sinensis HOM05D005475 ORTHO05D006575 6.0e-17 90.9 99 46.5
FAN17G2060 Fragaria x ananassa HOM05D005475 ORTHO05D006575 6.0e-17 90.9 97 51.5
Sabra08G0130500 Salix brachista HOM05D005475 ORTHO05D006575 1.7e-16 89.4 93 49.5
Hma1.2p1_0385F.1_g141450 Hydrangea macrophylla HOM05D005475 ORTHO05D006575 2.3e-16 89.0 90 51.1
Phvul.L002444 Phaseolus vulgaris HOM05D005475 ORTHO05D006575 2.3e-16 89.0 111 47.7
RcHm_v2.0_Chr4g0394791 Rosa chinensis HOM05D005475 ORTHO05D006575 2.3e-16 89.0 61 67.2
VMungo0720G1758 Vigna mungo HOM05D005475 ORTHO05D006575 8.6e-16 87.0 111 47.7
SalBow3G2868 Salvia bowleyana HOM05D005475 ORTHO05D006575 1.5e-15 86.3 83 50.6
Nitab4.5_0001051g0090 Nicotiana tabacum HOM05D005475 ORTHO05D006575 3.3e-15 85.1 99 47.5
Nitab4.5_0002709g0070 Nicotiana tabacum HOM05D005475 ORTHO05D006575 3.3e-15 85.1 99 47.5
vmacro08540 Vaccinium macrocarpon HOM05D005475 ORTHO05D006575 4.3e-15 84.7 93 45.2
Solyc09g090540.3 Solanum lycopersicum HOM05D005475 ORTHO05D006575 7.3e-15 84.0 67 59.7
Hma1.2p1_0112F.1_g054570 Hydrangea macrophylla HOM05D005475 ORTHO05D006575 9.5e-15 83.6 93 48.4
MELO3C006388.2 Cucumis melo HOM05D000730 ORTHO05D000578 2.1e-14 82.4 119 38.7
Eucgr.H02964 Eucalyptus grandis HOM05D005475 ORTHO05D006575 2.8e-14 82.0 94 47.9
Medtr1g045370 Medicago truncatula HOM05D005475 ORTHO05D006575 2.8e-14 82.0 80 52.5
Peaxi162Scf00033g02837 Petunia axillaris HOM05D005475 ORTHO05D006575 2.8e-14 82.0 77 51.9
Hund03078 Selenicereus undatus HOM05D005475 ORTHO05D006575 8.1e-14 80.5 69 52.2
CAN.G220.90 Capsicum annuum HOM05D005475 ORTHO05D006575 1.1e-13 80.1 92 47.8
Gohir.A10G108400 Gossypium hirsutum HOM05D005475 ORTHO05D006575 1.4e-13 79.7 92 45.7
Gohir.D10G159400 Gossypium hirsutum HOM05D005475 ORTHO05D006575 1.4e-13 79.7 92 45.7
Gorai.011G179000 Gossypium raimondii HOM05D005475 ORTHO05D006575 1.4e-13 79.7 92 45.7
PSO674G0109 Papaver somniferum HOM05D005475 ORTHO05D006575 1.4e-13 79.7 62 61.3
PSO832G2786 Papaver somniferum HOM05D005475 ORTHO05D006575 1.4e-13 79.7 62 61.3
Psat6g117200 Pisum sativum HOM05D005475 ORTHO05D006575 1.4e-13 79.7 92 50.0
Rhsim02G0042800 Rhododendron simsii HOM05D005475 ORTHO05D006575 2.3e-13 79.0 96 44.8
Cc03_g06010 Coffea canephora HOM05D005475 ORTHO05D006575 8.9e-13 77.0 92 42.4
Lsat_1_v5_gn_1_75221 Lactuca sativa HOM05D005475 ORTHO05D006575 8.9e-13 77.0 95 47.4
Lj5g0027748 Lotus japonicus HOM05D005475 ORTHO05D006575 8.9e-13 77.0 98 49.0
Actinidia11364 Actinidia chinensis HOM05D005475 ORTHO05D006575 1.2e-12 76.6 97 40.2
Migut.N00292 Erythranthe guttata HOM05D005475 ORTHO05D006575 1.2e-12 76.6 74 52.7
MBI07_g18714_MAGBIO Magnolia biondii HOM05D005475 ORTHO05D006575 1.2e-12 76.6 77 49.4
CsaV3_3G011800 Cucumis sativus L. HOM05D005475 ORTHO05D006575 1.5e-12 76.3 74 48.6
ECA248G3571 Erigeron canadensis HOM05D000730 ORTHO05D000578 1.5e-12 76.3 72 51.4
Lalb_Chr03g0037011 Lupinus albus HOM05D005475 ORTHO05D006575 1.5e-12 76.3 127 41.7
Manes.03G160400 Manihot esculenta HOM05D005475 ORTHO05D006575 1.5e-12 76.3 92 45.7
Medtr1g073660 Medicago truncatula HOM05D005475 ORTHO05D006575 2.0e-12 75.9 105 46.7
TPR.G28846 Trifolium pratense HOM05D005475 ORTHO05D006575 2.0e-12 75.9 104 45.2
Manes.15G044300 Manihot esculenta HOM05D005475 ORTHO05D006575 2.6e-12 75.5 72 50.0
Aqoxy2G03723 Aquilegia oxysepala HOM05D005475 ORTHO05D006575 4.4e-12 74.7 56 58.9
Lj6g0010293 Lotus japonicus HOM05D005475 ORTHO05D006575 5.8e-12 74.3 107 45.8
Glyma.20G086200 Glycine max HOM05D005475 ORTHO05D006575 7.5e-12 73.9 78 48.7
Sabra10G0040200 Salix brachista HOM05D005475 ORTHO05D006575 9.9e-12 73.6 79 49.4
Actinidia20831 Actinidia chinensis HOM05D005475 ORTHO05D006575 1.3e-11 73.2 95 40.0
FAN12G1687 Fragaria x ananassa HOM05D005475 ORTHO05D006575 1.3e-11 73.2 64 56.2
CDE08G0603 Ceratophyllum demersum HOM05D005475 ORTHO05D006575 2.2e-11 72.4 88 44.3
Duzib151G0481 Durio zibethinus HOM05D005475 ORTHO05D006575 4.9e-11 71.2 79 44.3
Sopen09g033470 Solanum pennellii HOM05D005475 ORTHO05D006575 6.4e-11 70.9 67 53.7
PGSC0003DMG400017155 Solanum tuberosum HOM05D005475 ORTHO05D006575 6.4e-11 70.9 67 53.7
vmacro15470 Vaccinium macrocarpon HOM05D005475 ORTHO05D006575 1.1e-10 70.1 94 44.7
PGR031G0084 Punica granatum HOM05D005475 ORTHO05D006575 1.9e-10 69.3 107 40.2
Lalb_Chr06g0169471 Lupinus albus HOM05D005475 ORTHO05D006575 3.2e-10 68.6 77 49.4
Actinidia39922 Actinidia chinensis HOM05D005475 ORTHO05D006575 1.6e-09 66.2 88 38.6
TPR.G27310 Trifolium pratense HOM05D005475 ORTHO05D006575 2.1e-09 65.9 58 51.7
MBI10_g38466_MAGBIO Magnolia biondii HOM05D005475 ORTHO05D006575 3.5e-09 65.1 105 41.9
CSS0022443 Camellia sinensis var. sinensis HOM05D005475 ORTHO05D006575 1.0e-08 63.5 72 44.4
HanXRQChr01g0022901 Helianthus annuus HOM05D005475 ORTHO05D006575 1.3e-08 63.2 41 70.7
FAN22G1457 Fragaria x ananassa HOM05D005475 ORTHO05D006575 1.7e-08 62.8 77 46.8
FvH4_4g04340 Fragaria vesca HOM05D005475 ORTHO05D006575 3.0e-08 62.0 78 46.2
Rhsim04G0173600 Rhododendron simsii HOM05D005475 ORTHO05D006575 3.9e-08 61.6 129 34.9
Sed0016405 Sechium edule HOM05D005475 ORTHO05D006575 3.9e-08 61.6 70 48.6
RcHm_v2.0_Chr4g0394821 Rosa chinensis HOM05D005475 ORTHO05D006575 1.5e-07 59.7 41 65.9
FAN22G0728 Fragaria x ananassa HOM05D005475 ORTHO05D006575 1.9e-07 59.3 54 53.7
AUR62002181 Chenopodium quinoa HOM05D005475 ORTHO05D006575 2.5e-07 58.9 95 42.1
AUR62015529 Chenopodium quinoa HOM05D005475 ORTHO05D006575 2.5e-07 58.9 95 42.1
Lalb_Chr02g0150621 Lupinus albus HOM05D005475 ORTHO05D006575 3.3e-07 58.5 54 55.6
Sc13g0006140 Simmondsia chinensis HOM05D005475 ORTHO05D006575 4.3e-07 58.2 60 50.0
TAR365G0748 Trochodendron aralioides HOM05D005475 ORTHO05D006575 2.1e-06 55.8 70 42.9
Nn1g02914 Nelumbo nucifera HOM05D005475 ORTHO05D006575 3.6e-06 55.1 75 40.0
unitig_26.g9548 Utricularia gibba HOM05D005475 ORTHO05D006575 4.7e-06 54.7 46 54.3


User provided reference genes

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