Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G28890 Arabidopsis lyrata HOM05D006155 ORTHO05D007529 4.5e-129 464.5 225 100.0
AT2G33255 Arabidopsis thaliana HOM05D006155 ORTHO05D007529 8.0e-126 453.8 225 96.9
Carub.0004s1472 Capsella rubella HOM05D006155 ORTHO05D007529 1.1e-124 449.9 225 96.0
CARHR127260 Cardamine hirsuta HOM05D006155 ORTHO05D007529 1.6e-121 439.5 225 92.9
Thhalv10017161m.g Eutrema salsugineum HOM05D006155 ORTHO05D007529 3.8e-120 434.9 225 91.1
BcaB06g28663 Brassica carinata HOM05D006155 ORTHO05D007529 1.5e-119 433.0 226 92.0
BcaC02g07849 Brassica carinata HOM05D006155 ORTHO05D007529 1.5e-119 433.0 226 92.0
BcaC01g05849 Brassica carinata HOM05D006155 ORTHO05D007529 4.2e-119 431.4 225 91.6
C03p21810 Brassica napus HOM05D006155 ORTHO05D007529 4.2e-119 431.4 225 91.6
BraA03t11126Z Brassica rapa HOM05D006155 ORTHO05D007529 4.2e-119 431.4 225 91.1
BolC3t14563H Brassica oleracea HOM05D006155 ORTHO05D007529 5.5e-119 431.0 225 91.6
BraA04t18060Z Brassica rapa HOM05D006155 ORTHO05D007529 5.5e-119 431.0 225 91.6
BcaC02g07846 Brassica carinata HOM05D006155 ORTHO05D007529 9.4e-119 430.3 225 91.6
C04p62700 Brassica napus HOM05D006155 ORTHO05D007529 9.4e-119 430.3 225 91.6
Sp4g15560 Schrenkiella parvula HOM05D006155 ORTHO05D007529 2.1e-118 429.1 225 91.1
A03p18670 Brassica napus HOM05D006155 ORTHO05D007529 6.1e-118 427.6 225 90.2
Aa31LG5G4150 Aethionema arabicum HOM05D006155 ORTHO05D007529 1.0e-117 426.8 226 91.2
BolC4t27754H Brassica oleracea HOM05D006155 ORTHO05D007529 2.3e-117 425.6 226 91.2
THA.LOC104816010 Tarenaya hassleriana HOM05D006155 ORTHO05D007529 7.5e-108 394.0 220 83.2
Ciclev10005577m.g Citrus clementina HOM05D006155 ORTHO05D007529 1.0e-101 373.6 217 77.9
Gohir.D10G160700 Gossypium hirsutum HOM05D006155 ORTHO05D007529 1.4e-101 373.2 219 79.0
Gorai.011G180400 Gossypium raimondii HOM05D006155 ORTHO05D007529 3.0e-101 372.1 219 78.5
COL.COLO4_15996 Corchorus olitorius HOM05D006155 ORTHO05D007529 1.5e-100 369.8 219 76.7
Gohir.A10G106500 Gossypium hirsutum HOM05D006155 ORTHO05D007529 2.6e-100 369.0 219 77.6
Atru.chr4.1882 Acer truncatum HOM05D006155 ORTHO05D007529 5.7e-100 367.9 217 78.3
Haze_11491 Corylus avellana HOM05D006155 ORTHO05D007529 7.5e-100 367.5 225 75.1
Duzib151G0563 Durio zibethinus HOM05D006155 ORTHO05D007529 7.5e-100 367.5 221 76.0
Thecc.04G268500 Theobroma cacao HOM05D006155 ORTHO05D007529 1.3e-99 366.7 225 74.7
Manes.15G047200 Manihot esculenta HOM05D006155 ORTHO05D007529 6.4e-99 364.4 217 76.5
TWI09G0038 Tripterygium wilfordii HOM05D006155 ORTHO05D007529 6.4e-99 364.4 217 77.4
Potri.010G063700 Populus trichocarpa HOM05D006155 ORTHO05D007529 9.2e-98 360.5 222 73.9
Sabra10G0043200 Salix brachista HOM05D006155 ORTHO05D007529 9.2e-98 360.5 222 73.4
Prupe.1G052300 Prunus persica HOM05D006155 ORTHO05D007529 1.2e-97 360.1 227 73.6
Cfa014810 Carpinus fangiana HOM05D006155 ORTHO05D007529 1.6e-97 359.8 225 73.3
Aqoxy2G03758 Aquilegia oxysepala HOM05D006155 ORTHO05D007529 2.0e-97 359.4 217 74.7
Eucgr.H02890 Eucalyptus grandis HOM05D006155 ORTHO05D007529 4.6e-97 358.2 217 74.2
Lj6C638T14 Lonicera japonica HOM05D006155 ORTHO05D007529 1.3e-96 356.7 219 73.1
Lju2262C0T14 Lonicera japonica HOM05D006155 ORTHO05D007529 2.9e-96 355.5 219 73.1
RcHm_v2.0_Chr4g0396071 Rosa chinensis HOM05D006155 ORTHO05D007529 1.5e-95 353.2 225 72.4
EL10Ac3g06713 Beta vulgaris HOM05D006155 ORTHO05D007529 3.3e-95 352.1 224 71.9
MD16G1230400 Malus domestica HOM05D006155 ORTHO05D007529 3.3e-95 352.1 224 72.8
PGR004G1196 Punica granatum HOM05D006155 ORTHO05D007529 4.3e-95 351.7 217 73.7
Hma1.2p1_0042F.1_g025650 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 7.3e-95 350.9 228 70.6
Ah.13g074940 Amaranthus hybridus HOM05D006155 ORTHO05D007529 9.5e-95 350.5 225 70.7
Actinidia35935 Actinidia chinensis HOM05D006155 ORTHO05D007529 1.2e-94 350.1 217 73.3
Sopen09g033690 Solanum pennellii HOM05D006155 ORTHO05D007529 1.2e-94 350.1 220 71.4
PGSC0003DMG400001560 Solanum tuberosum HOM05D006155 ORTHO05D007529 2.1e-94 349.4 220 71.4
DCAR_002295 Daucus carota HOM05D006155 ORTHO05D007529 2.8e-94 349.0 225 69.3
Lsat_1_v5_gn_1_76101 Lactuca sativa HOM05D006155 ORTHO05D007529 3.6e-94 348.6 217 71.4
arahy.Tifrunner.gnm1.ann1.NLE1X5 Arachis hypogaea HOM05D006155 ORTHO05D007529 6.2e-94 347.8 219 72.1
Solyc09g090750.3 Solanum lycopersicum HOM05D006155 ORTHO05D007529 6.2e-94 347.8 220 70.9
Migut.N00320 Erythranthe guttata HOM05D006155 ORTHO05D007529 8.0e-94 347.4 216 72.7
CANSAT78G1287 Cannabis sativa HOM05D006155 ORTHO05D007529 1.4e-93 346.7 221 71.9
PSO063G0276 Papaver somniferum HOM05D006155 ORTHO05D007529 1.4e-93 346.7 224 71.4
Duzib212G0768 Durio zibethinus HOM05D006155 ORTHO05D007529 1.8e-93 346.3 221 71.0
Oeu055271.1 Olea europaea HOM05D006155 ORTHO05D007529 1.8e-93 346.3 221 71.0
SalBow3G4628 Salvia bowleyana HOM05D006155 ORTHO05D007529 1.8e-93 346.3 222 71.6
arahy.Tifrunner.gnm1.ann1.L647M7 Arachis hypogaea HOM05D006155 ORTHO05D007529 2.3e-93 345.9 219 71.7
GSVIVG01027954001 Vitis vinifera HOM05D006155 ORTHO05D007529 2.3e-93 345.9 225 69.3
CAN.G812.29 Capsicum annuum HOM05D006155 ORTHO05D007529 4.0e-93 345.1 216 72.2
Rhsim09G0042400 Rhododendron simsii HOM05D006155 ORTHO05D007529 4.0e-93 345.1 228 71.1
FvH4_4g05140 Fragaria vesca HOM05D006155 ORTHO05D007529 6.8e-93 344.4 227 70.9
FAN12G3888 Fragaria x ananassa HOM05D006155 ORTHO05D007529 8.9e-93 344.0 227 70.9
Actinidia32965 Actinidia chinensis HOM05D006155 ORTHO05D007529 1.5e-92 343.2 223 70.4
CSS0040589 Camellia sinensis var. sinensis HOM05D006155 ORTHO05D007529 1.5e-92 343.2 219 71.7
Nitab4.5_0003474g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 2.0e-92 342.8 221 70.6
SGA_v2.0_scaffold285G47059 Striga asiatica HOM05D006155 ORTHO05D007529 5.8e-92 341.3 217 71.9
Oeu023143.1 Olea europaea HOM05D006155 ORTHO05D007529 7.5e-92 340.9 220 70.0
Dinv27131 Davidia involucrata HOM05D006155 ORTHO05D007529 9.8e-92 340.5 221 69.2
Lalb_Chr02g0150741 Lupinus albus HOM05D006155 ORTHO05D007529 2.2e-91 339.3 221 69.2
HanXRQChr01g0022501 Helianthus annuus HOM05D006155 ORTHO05D007529 2.9e-91 339.0 217 70.5
Nitab4.5_0002937g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 2.9e-91 339.0 220 70.5
CDE02G2305 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 3.7e-91 338.6 225 67.6
ClCG05G003860 Citrullus lanatus HOM05D006155 ORTHO05D007529 1.4e-90 336.7 220 70.0
MSTRG.24647 Avicennia marina HOM05D006155 ORTHO05D007529 2.4e-90 335.9 219 69.4
CsaV3_3G011540 Cucumis sativus L. HOM05D006155 ORTHO05D007529 4.1e-90 335.1 220 69.1
Peaxi162Scf00125g01318 Petunia axillaris HOM05D006155 ORTHO05D007529 4.1e-90 335.1 218 71.6
Hund20478 Selenicereus undatus HOM05D006155 ORTHO05D007529 5.4e-90 334.7 213 71.4
Cc03_g06750 Coffea canephora HOM05D006155 ORTHO05D007529 9.2e-90 334.0 221 68.3
MELO3C006364.2 Cucumis melo HOM05D006155 ORTHO05D007529 1.6e-89 333.2 221 67.9
FAN22G1742 Fragaria x ananassa HOM05D006155 ORTHO05D007529 2.0e-89 332.8 249 65.1
Sed0003799 Sechium edule HOM05D006155 ORTHO05D007529 2.7e-89 332.4 230 67.0
Phvul.L001872 Phaseolus vulgaris HOM05D006155 ORTHO05D007529 7.8e-89 330.9 223 66.4
Lj5g0009281 Lotus japonicus HOM05D006155 ORTHO05D007529 1.3e-88 330.1 219 68.0
Glyma.20G199100 Glycine max HOM05D006155 ORTHO05D007529 1.7e-88 329.7 225 65.8
FAN17G0987 Fragaria x ananassa HOM05D006155 ORTHO05D007529 3.9e-88 328.6 239 67.4
Os02g0816100 Oryza sativa ssp. japonica HOM05D006155 ORTHO05D007529 5.0e-88 328.2 214 70.1
TPR.G18563 Trifolium pratense HOM05D006155 ORTHO05D007529 5.0e-88 328.2 220 68.2
Glyma.10G191200 Glycine max HOM05D006155 ORTHO05D007529 8.6e-88 327.4 217 66.8
Medtr1g073140 Medicago truncatula HOM05D006155 ORTHO05D007529 1.9e-87 326.2 217 69.1
Ca_09794_v3 Cicer arietinum L. HOM05D006155 ORTHO05D007529 3.6e-86 322.0 217 67.3
VMungo0720G0761 Vigna mungo HOM05D006155 ORTHO05D007529 1.4e-85 320.1 225 64.4
ECA248G1656 Erigeron canadensis HOM05D006155 ORTHO05D007529 1.8e-85 319.7 195 73.3
Nn3g19816 Nelumbo nucifera HOM05D006155 ORTHO05D007529 1.2e-84 317.0 205 69.8
unitig_899.g15552 Utricularia gibba HOM05D006155 ORTHO05D007529 1.5e-84 316.6 269 59.9
Sed0011773 Sechium edule HOM05D006155 ORTHO05D007529 5.8e-84 314.7 228 64.0
vmacro00537 Vaccinium macrocarpon HOM05D006155 ORTHO05D007529 1.7e-83 313.2 311 50.8
HPP92_007421 Vanilla planifolia HOM05D006155 ORTHO05D007529 7.8e-81 304.3 199 68.8
Cpa.g.sc3.348 Carica papaya HOM05D006155 ORTHO05D007529 1.1e-77 293.9 174 77.0
MBI07_g08907_MAGBIO Magnolia biondii HOM05D006155 ORTHO05D007529 4.0e-77 292.0 167 78.4
ATR0787G199 Amborella trichopoda HOM05D006155 ORTHO05D007529 1.2e-73 280.4 205 62.9
Sc04g0004680 Simmondsia chinensis HOM05D006155 ORTHO05D007529 2.7e-73 279.3 165 75.2
SMO165G0032 Selaginella moellendorffii HOM05D006155 ORTHO05D007529 3.9e-72 275.4 215 62.3
CDE01G0085 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 1.3e-67 260.4 225 55.6
Pp3c17_6550 Physcomitrium patens HOM05D006155 ORTHO05D007529 2.3e-64 249.6 226 56.6
Pp3c2_6750 Physcomitrium patens HOM05D006155 ORTHO05D007529 1.5e-60 236.9 217 53.0
TAR365G0649 Trochodendron aralioides HOM05D006155 ORTHO05D007529 4.0e-53 212.2 141 68.8
LjContig00022g0011299 Lotus japonicus HOM05D006155 ORTHO05D007529 2.6e-52 209.5 166 61.4
MCO11G090 Micromonas commoda HOM05D006155 ORTHO05D007529 7.9e-49 198.0 215 48.8
CiPaw.01G175800 Carya illinoinensis HOM05D006155 ORTHO05D007529 1.0e-43 181.0 101 76.2
Psat6g138760 Pisum sativum HOM05D006155 ORTHO05D007529 8.4e-43 177.9 127 64.6
QL06p021877 Quercus lobata HOM05D006155 ORTHO05D007529 6.7e-40 168.3 99 77.8
Cre03.g193000 Chlamydomonas reinhardtii HOM05D006155 ORTHO05D007529 7.4e-39 164.9 211 44.1
SMO115G0208 Selaginella moellendorffii HOM05D006155 ORTHO05D007529 1.2e-36 157.5 213 40.8
Hma1.2p1_0042F.1_g025660 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 3.5e-33 146.0 95 72.6
Hma1.2p1_0144F.1_g065125 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 3.5e-33 146.0 95 72.6
SGA_v2.0_scaffold31G12610 Striga asiatica HOM05D006155 ORTHO05D007529 5.1e-32 142.1 210 40.5
AUR62035887 Chenopodium quinoa HOM05D006155 ORTHO05D007529 6.7e-32 141.7 87 72.4
Rhsim09G0043000 Rhododendron simsii HOM05D006155 ORTHO05D007529 3.3e-31 139.4 95 70.5
Zm00001eb191500 Zea mays HOM05D006155 ORTHO05D007529 6.3e-30 135.2 105 60.0
Lj5g0004239 Lotus japonicus HOM05D006155 ORTHO05D007529 7.7e-28 128.3 119 56.3
Lj5g0006737 Lotus japonicus HOM05D006155 ORTHO05D007529 7.7e-28 128.3 119 56.3
SEGI_12787 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 1.7e-27 127.1 96 65.6
Rhsim09G0041400 Rhododendron simsii HOM05D000030 ORTHO05D000009 7.9e-25 118.2 79 70.9
SEGI_32209 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 4.3e-23 112.5 84 65.5
Actinidia37388 Actinidia chinensis HOM05D006155 ORTHO05D007529 9.1e-21 104.8 60 73.3
Rhsim09G0048000 Rhododendron simsii HOM05D000029 ORTHO05D002162 5.0e-19 99.0 79 63.3
Cre01.g025100 Chlamydomonas reinhardtii HOM05D006155 ORTHO05D007529 1.1e-18 97.8 213 31.5
C09p23060 Brassica napus HOM05D006155 ORTHO05D007529 3.9e-16 89.4 49 89.8
SalBow7G2104 Salvia bowleyana HOM05D000708 ORTHO05D001418 1.3e-14 84.3 48 81.2
SGA_v2.0_scaffold31G12618 Striga asiatica HOM05D006155 ORTHO05D007529 4.8e-14 82.4 190 32.1
PRCOL_00006483 Prasinoderma coloniale HOM05D005540 ORTHO05D006932 8.2e-14 81.6 192 31.8
AUR62035886 Chenopodium quinoa HOM05D006155 ORTHO05D007529 1.4e-13 80.9 55 65.5


User provided reference genes

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