Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G28880 Arabidopsis lyrata HOM05D004244 ORTHO05D004964 1.6e-155 552.7 287 100.0
AT2G33250 Arabidopsis thaliana HOM05D004244 ORTHO05D004964 4.5e-134 481.5 293 87.7
Carub.0004s1471 Capsella rubella HOM05D004244 ORTHO05D004964 5.2e-106 388.3 299 73.9
Sp4g15550 Schrenkiella parvula HOM05D004244 ORTHO05D004964 2.9e-104 382.5 296 71.3
CARHR127250 Cardamine hirsuta HOM05D004244 ORTHO05D004964 1.1e-103 380.6 290 73.1
Thhalv10017015m.g Eutrema salsugineum HOM05D004244 ORTHO05D004964 6.0e-102 374.8 295 71.5
Aa31LG5G4140 Aethionema arabicum HOM05D004244 ORTHO05D004964 7.1e-87 324.7 310 61.6
BolC4t27754H Brassica oleracea HOM05D006155 ORTHO05D007529 6.0e-86 321.6 286 64.7
BcaC02g07847 Brassica carinata HOM05D004244 ORTHO05D004964 1.3e-85 320.5 294 65.0
C04p62700 Brassica napus HOM05D006155 ORTHO05D007529 1.8e-85 320.1 286 64.7
BraA04t18060Z Brassica rapa HOM05D006155 ORTHO05D007529 3.1e-82 309.3 288 63.5
A04p25560 Brassica napus HOM05D004244 ORTHO05D004964 2.7e-78 296.2 292 61.3
BcaB06g28663 Brassica carinata HOM05D006155 ORTHO05D007529 1.1e-74 284.3 296 60.5
BcaC02g07850 Brassica carinata HOM05D004244 ORTHO05D004964 1.5e-49 200.7 176 67.6
THA.LOC104826102 Tarenaya hassleriana HOM05D004244 ORTHO05D004964 7.7e-33 145.2 310 39.0
Cpa.g.sc59.37 Carica papaya HOM05D004244 ORTHO05D004964 3.5e-25 119.8 204 43.6
Manes.03G156200 Manihot esculenta HOM05D004244 ORTHO05D004964 3.3e-23 113.2 280 34.6
COL.COLO4_16006 Corchorus olitorius HOM05D004244 ORTHO05D004964 1.2e-22 111.3 249 35.7
FvH4_4g05190 Fragaria vesca HOM05D004244 ORTHO05D004964 8.9e-21 105.1 180 38.9
FAN17G1122 Fragaria x ananassa HOM05D004244 ORTHO05D004964 2.0e-20 104.0 178 39.3
Potri.010G063300 Populus trichocarpa HOM05D004244 ORTHO05D004964 2.6e-20 103.6 183 39.9
CiPaw.01G175300 Carya illinoinensis HOM05D004244 ORTHO05D004964 3.4e-20 103.2 186 39.2
FAN12G2846 Fragaria x ananassa HOM05D004244 ORTHO05D004964 4.4e-20 102.8 180 38.3
MD16G1230800 Malus domestica HOM05D004244 ORTHO05D004964 4.4e-20 102.8 187 37.4
QL06p021978 Quercus lobata HOM05D004244 ORTHO05D004964 9.8e-20 101.7 186 38.7
Phvul.007G227000 Phaseolus vulgaris HOM05D004244 ORTHO05D004964 2.8e-19 100.1 237 33.8
arahy.Tifrunner.gnm1.ann1.QYR710 Arachis hypogaea HOM05D004244 ORTHO05D004964 3.7e-19 99.8 201 37.8
Nn1g03029 Nelumbo nucifera HOM05D004244 ORTHO05D004964 3.7e-19 99.8 287 33.4
arahy.Tifrunner.gnm1.ann1.9VYP7U Arachis hypogaea HOM05D004244 ORTHO05D004964 6.3e-19 99.0 201 37.8
Gorai.006G255200 Gossypium raimondii HOM05D004244 ORTHO05D004964 8.3e-19 98.6 179 37.4
MD13G1225800 Malus domestica HOM05D004244 ORTHO05D004964 8.3e-19 98.6 187 38.0
Medtr1g045520 Medicago truncatula HOM05D004244 ORTHO05D004964 8.3e-19 98.6 186 38.7
Prupe.1G052600 Prunus persica HOM05D004244 ORTHO05D004964 8.3e-19 98.6 202 34.7
Gohir.D09G232300 Gossypium hirsutum HOM05D004244 ORTHO05D004964 3.2e-18 96.7 179 37.4
Ca_11893_v3 Cicer arietinum L. HOM05D004244 ORTHO05D004964 4.1e-18 96.3 179 38.0
Thecc.04G269100 Theobroma cacao HOM05D004244 ORTHO05D004964 4.1e-18 96.3 273 30.4
CsaV3_2G012190 Cucumis sativus L. HOM05D004244 ORTHO05D004964 5.4e-18 95.9 253 34.8
TPR.G23981 Trifolium pratense HOM05D004244 ORTHO05D004964 7.0e-18 95.5 198 37.4
Duzib052G0270 Durio zibethinus HOM05D004244 ORTHO05D004964 9.2e-18 95.1 187 35.8
Duzib052G0780 Durio zibethinus HOM05D004244 ORTHO05D004964 9.2e-18 95.1 249 32.9
Lj6g0017438 Lotus japonicus HOM05D004244 ORTHO05D004964 9.2e-18 95.1 198 37.4
Gohir.A09G231200 Gossypium hirsutum HOM05D004244 ORTHO05D004964 1.2e-17 94.7 188 36.2
GSVIVG01001856001 Vitis vinifera HOM05D004244 ORTHO05D004964 1.2e-17 94.7 290 31.4
Glyma.10G132400 Glycine max HOM05D004244 ORTHO05D004964 2.0e-17 94.0 273 31.9
Lalb_Chr03g0036891 Lupinus albus HOM05D004244 ORTHO05D004964 4.5e-17 92.8 214 35.0
Peaxi162Scf00125g01118 Petunia axillaris HOM05D004244 ORTHO05D004964 4.5e-17 92.8 210 34.3
Cc03_g06840 Coffea canephora HOM05D004244 ORTHO05D004964 7.8e-17 92.0 215 33.0
MELO3C023072.2 Cucumis melo HOM05D004244 ORTHO05D004964 1.3e-16 91.3 242 32.2
Nn3g19830 Nelumbo nucifera HOM05D004244 ORTHO05D004964 1.3e-16 91.3 244 34.0
MBI07_g19046_MAGBIO Magnolia biondii HOM05D004244 ORTHO05D004964 2.3e-16 90.5 289 31.5
Aqoxy5G00098 Aquilegia oxysepala HOM05D004244 ORTHO05D004964 6.6e-16 89.0 257 30.4
Actinidia11381 Actinidia chinensis HOM05D004244 ORTHO05D004964 3.3e-15 86.7 224 34.4
HPP92_025817 Vanilla planifolia HOM05D004244 ORTHO05D004964 3.3e-15 86.7 212 35.4
Nitab4.5_0000451g0020 Nicotiana tabacum HOM05D004244 ORTHO05D004964 5.6e-15 85.9 219 30.6
Actinidia38930 Actinidia chinensis HOM05D004244 ORTHO05D004964 7.3e-15 85.5 219 33.3
Rhsim02G0048800 Rhododendron simsii HOM05D004244 ORTHO05D004964 7.3e-15 85.5 189 36.5
Atru.chr4.1873 Acer truncatum HOM05D004244 ORTHO05D004964 9.5e-15 85.1 188 34.6
MSTRG.24646 Avicennia marina HOM05D004244 ORTHO05D004964 9.5e-15 85.1 211 31.8
Lsat_1_v5_gn_2_42020 Lactuca sativa HOM05D004244 ORTHO05D004964 9.5e-15 85.1 187 33.2
PSO170G0851 Papaver somniferum HOM05D004244 ORTHO05D004964 1.6e-14 84.3 239 32.6
PSO674G0105 Papaver somniferum HOM05D004244 ORTHO05D004964 1.6e-14 84.3 194 34.5
Hund24865 Selenicereus undatus HOM05D004244 ORTHO05D004964 1.6e-14 84.3 139 40.3
Actinidia34761 Actinidia chinensis HOM05D004244 ORTHO05D004964 2.1e-14 84.0 221 31.7
Nitab4.5_0000867g0080 Nicotiana tabacum HOM05D004244 ORTHO05D004964 2.1e-14 84.0 221 33.0
TAR633G1781 Trochodendron aralioides HOM05D004244 ORTHO05D004964 2.1e-14 84.0 198 33.8
EL10Ac3g06716 Beta vulgaris HOM05D004244 ORTHO05D004964 2.8e-14 83.6 283 29.7
Cfa014824 Carpinus fangiana HOM05D004244 ORTHO05D004964 2.8e-14 83.6 199 34.2
Sabra10G0043500 Salix brachista HOM05D004244 ORTHO05D004964 2.8e-14 83.6 189 37.0
Rhsim09G0132600 Rhododendron simsii HOM05D004244 ORTHO05D004964 3.6e-14 83.2 249 31.7
CDE11G0045 Ceratophyllum demersum HOM05D004244 ORTHO05D004964 4.7e-14 82.8 281 27.8
Sc19g0005660 Simmondsia chinensis HOM05D004244 ORTHO05D004964 6.1e-14 82.4 257 32.3
Dinv27132 Davidia involucrata HOM05D004244 ORTHO05D004964 8.0e-14 82.0 206 32.5
PGR004G0368 Punica granatum HOM05D004244 ORTHO05D004964 8.0e-14 82.0 185 30.3
TAR362G0565 Trochodendron aralioides HOM05D004244 ORTHO05D004964 1.0e-13 81.6 293 28.3
PGR031G0411 Punica granatum HOM05D004244 ORTHO05D004964 1.4e-13 81.3 213 30.0
Hma1.2p1_0112F.1_g054970 Hydrangea macrophylla HOM05D004244 ORTHO05D004964 3.1e-13 80.1 271 29.5
SalBow3G0496 Salvia bowleyana HOM05D004244 ORTHO05D004964 4.0e-13 79.7 213 32.9
SalBow3G1459 Salvia bowleyana HOM05D004244 ORTHO05D004964 4.0e-13 79.7 213 32.9
Gohir.D11G254600 Gossypium hirsutum HOM05D004244 ORTHO05D004964 5.2e-13 79.3 194 32.5
Gorai.007G273200 Gossypium raimondii HOM05D004244 ORTHO05D004964 5.2e-13 79.3 194 32.5
Eucgr.H02883 Eucalyptus grandis HOM05D004244 ORTHO05D004964 6.8e-13 79.0 186 33.3
TWI09G1213 Tripterygium wilfordii HOM05D004244 ORTHO05D004964 8.9e-13 78.6 188 34.0
Thhalv10029243m.g Eutrema salsugineum HOM05D004244 ORTHO05D004964 4.4e-12 76.3 55 69.1
Duzib106G0844 Durio zibethinus HOM05D004244 ORTHO05D004964 5.8e-12 75.9 218 29.8
Migut.N00322 Erythranthe guttata HOM05D004244 ORTHO05D004964 5.8e-12 75.9 223 27.8
Sopen09g033990 Solanum pennellii HOM05D004244 ORTHO05D004964 5.8e-12 75.9 202 32.2
ECA238G3737 Erigeron canadensis HOM05D004244 ORTHO05D004964 1.3e-11 74.7 175 33.7
Solyc09g091010.3 Solanum lycopersicum HOM05D004244 ORTHO05D004964 1.7e-11 74.3 203 32.0
Nitab4.5_0000841g0060 Nicotiana tabacum HOM05D004244 ORTHO05D004964 3.7e-11 73.2 222 28.8
Haze_11497 Corylus avellana HOM05D004244 ORTHO05D004964 6.4e-11 72.4 172 34.3
PGSC0003DMG402001493 Solanum tuberosum HOM05D004244 ORTHO05D004964 6.4e-11 72.4 206 29.6
CANSAT78G2336 Cannabis sativa HOM05D004244 ORTHO05D004964 1.4e-10 71.2 284 28.9
Oeu010184.1 Olea europaea HOM05D004244 ORTHO05D004964 1.4e-10 71.2 247 29.1
Actinidia39939 Actinidia chinensis HOM05D004244 ORTHO05D004964 1.9e-10 70.9 131 38.9
Eucgr.B01738 Eucalyptus grandis HOM05D004244 ORTHO05D004964 2.4e-10 70.5 221 27.6
Sed0027895 Sechium edule HOM05D004244 ORTHO05D004964 2.4e-10 70.5 178 30.3
SGA_v2.0_scaffold398G50771 Striga asiatica HOM05D004244 ORTHO05D004964 2.4e-10 70.5 212 31.6
unitig_26.g9547 Utricularia gibba HOM05D004244 ORTHO05D004964 2.4e-10 70.5 204 29.9
VMungo0720G2410 Vigna mungo HOM05D004244 ORTHO05D004964 5.4e-10 69.3 182 34.6
Duzib151G0660 Durio zibethinus HOM05D004244 ORTHO05D004964 7.0e-10 68.9 162 32.7
Psat1g024120 Pisum sativum HOM05D004244 ORTHO05D004964 9.2e-10 68.6 184 32.1
Migut.F02055 Erythranthe guttata HOM05D004244 ORTHO05D004964 1.6e-09 67.8 263 27.8
Sopen04g021060 Solanum pennellii HOM05D004244 ORTHO05D004964 1.6e-09 67.8 231 27.3
Nitab4.5_0008594g0020 Nicotiana tabacum HOM05D004244 ORTHO05D004964 2.0e-09 67.4 254 26.4
Gohir.A11G244500 Gossypium hirsutum HOM05D004244 ORTHO05D004964 3.5e-09 66.6 175 32.6
GSVIVG01026322001 Vitis vinifera HOM05D004244 ORTHO05D004964 3.5e-09 66.6 189 29.1
Manes.08G141600 Manihot esculenta HOM05D004244 ORTHO05D004964 4.6e-09 66.2 257 29.2
COL.COLO4_15535 Corchorus olitorius HOM05D004244 ORTHO05D004964 7.8e-09 65.5 198 26.8
ClCG06G007490 Citrullus lanatus HOM05D004244 ORTHO05D004964 1.3e-08 64.7 181 32.6
Duzib266G0003 Durio zibethinus HOM05D004244 ORTHO05D004964 3.9e-08 63.2 119 35.3
Ciclev10005346m.g Citrus clementina HOM05D004244 ORTHO05D004964 1.9e-07 60.8 159 34.0
Ciclev10021373m.g Citrus clementina HOM05D004244 ORTHO05D004964 3.3e-07 60.1 295 28.1
Hma1.2p1_0130F.1_g060490 Hydrangea macrophylla HOM05D004244 ORTHO05D004964 4.3e-07 59.7 233 29.2
vmacro10383 Vaccinium macrocarpon HOM05D004244 ORTHO05D004964 7.3e-07 58.9 238 29.8
ATR0723G041 Amborella trichopoda HOM05D004244 ORTHO05D004964 9.5e-07 58.5 186 32.8
Cc09_g03010 Coffea canephora HOM05D004244 ORTHO05D004964 1.2e-06 58.2 224 29.5
SalBow1G0411 Salvia bowleyana HOM05D004244 ORTHO05D004964 1.2e-06 58.2 189 27.0
Atru.chr2.1111 Acer truncatum HOM05D004244 ORTHO05D004964 2.1e-06 57.4 227 28.6
Thecc.05G266700 Theobroma cacao HOM05D004244 ORTHO05D004964 2.1e-06 57.4 180 29.4
Cpa.g.sc756.3 Carica papaya HOM05D004244 ORTHO05D004964 2.8e-06 57.0 181 27.1


User provided reference genes

Program Settings