Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G27290 Arabidopsis lyrata HOM05D006202 ORTHO05D008227 5.3e-226 787.3 390 100.0
AT2G31955 Arabidopsis thaliana HOM05D006202 ORTHO05D008227 3.1e-218 761.5 391 96.2
Carub.0004s1327 Capsella rubella HOM05D006202 ORTHO05D008227 1.3e-211 739.6 390 94.4
Sp4g14320 Schrenkiella parvula HOM05D006202 ORTHO05D008227 1.5e-204 716.1 390 91.5
Thhalv10016791m.g Eutrema salsugineum HOM05D006202 ORTHO05D008227 1.7e-200 702.6 391 91.0
Aa31LG5G5070 Aethionema arabicum HOM05D006202 ORTHO05D008227 6.7e-197 690.6 391 87.0
BcaC01g05926 Brassica carinata HOM05D006202 ORTHO05D008227 2.4e-194 682.2 390 87.2
BraA03t11059Z Brassica rapa HOM05D006202 ORTHO05D008227 9.1e-194 680.2 390 86.9
BolC3t14483H Brassica oleracea HOM05D006202 ORTHO05D008227 2.2e-192 675.6 391 86.7
THA.LOC104815880 Tarenaya hassleriana HOM05D006202 ORTHO05D008227 4.4e-188 661.4 400 83.8
QL04p001552 Quercus lobata HOM05D006202 ORTHO05D008227 8.2e-179 630.6 399 77.4
A03p17940 Brassica napus HOM05D000200 ORTHO05D000262 2.0e-177 625.9 367 85.6
Haze_03268 Corylus avellana HOM05D006202 ORTHO05D008227 7.7e-177 624.0 399 76.2
AL80U10060 Arabidopsis lyrata HOM05D006202 ORTHO05D008227 2.9e-176 622.1 390 83.6
C03p21020 Brassica napus HOM05D000200 ORTHO05D000262 1.5e-175 619.8 367 84.5
Lj3g0005275 Lotus japonicus HOM05D006202 ORTHO05D008227 3.2e-175 618.6 400 76.0
Atru.chr11.2704 Acer truncatum HOM05D006202 ORTHO05D008227 2.7e-174 615.5 390 76.4
Ciclev10031726m.g Citrus clementina HOM05D006202 ORTHO05D008227 4.7e-174 614.8 401 75.8
Manes.10G152100 Manihot esculenta HOM05D006202 ORTHO05D008227 1.8e-173 612.8 395 75.7
Prupe.1G561800 Prunus persica HOM05D006202 ORTHO05D008227 2.3e-173 612.5 400 75.5
MBI04_g33961_MAGBIO Magnolia biondii HOM05D006202 ORTHO05D008227 5.2e-173 611.3 406 74.6
TWI73G0821 Tripterygium wilfordii HOM05D006202 ORTHO05D008227 5.2e-173 611.3 399 75.4
Dinv43939 Davidia involucrata HOM05D006202 ORTHO05D008227 1.2e-172 610.1 398 75.1
Glyma.08G157800 Glycine max HOM05D006202 ORTHO05D008227 1.5e-172 609.8 403 74.2
Glyma.15G268400 Glycine max HOM05D006202 ORTHO05D008227 1.5e-172 609.8 403 74.7
Lalb_Chr01g0015151 Lupinus albus HOM05D006202 ORTHO05D008227 1.5e-172 609.8 400 74.0
GSVIVG01001357001 Vitis vinifera HOM05D006202 ORTHO05D008227 1.5e-172 609.8 423 73.0
Cfa010710 Carpinus fangiana HOM05D006202 ORTHO05D008227 2.0e-172 609.4 364 79.7
Nitab4.5_0010722g0010 Nicotiana tabacum HOM05D006202 ORTHO05D008227 7.5e-172 607.4 383 77.8
Cpa.g.sc189.4 Carica papaya HOM05D006202 ORTHO05D008227 9.7e-172 607.1 380 78.9
CiPaw.02G012300 Carya illinoinensis HOM05D006202 ORTHO05D008227 1.7e-171 606.3 376 78.5
Nitab4.5_0000468g0040 Nicotiana tabacum HOM05D006202 ORTHO05D008227 8.3e-171 604.0 376 78.7
TAR369G0651 Trochodendron aralioides HOM05D006202 ORTHO05D008227 8.3e-171 604.0 407 73.0
PSO384G0467 Papaver somniferum HOM05D006202 ORTHO05D008227 1.1e-170 603.6 405 73.6
TPR.G16148 Trifolium pratense HOM05D006202 ORTHO05D008227 1.1e-170 603.6 400 74.2
Potri.009G024100 Populus trichocarpa HOM05D006202 ORTHO05D008227 1.8e-170 602.8 400 74.8
CSS0029964 Camellia sinensis var. sinensis HOM05D006202 ORTHO05D008227 7.0e-170 600.9 407 72.5
MD02G1319400 Malus domestica HOM05D006202 ORTHO05D008227 7.0e-170 600.9 388 76.0
RcHm_v2.0_Chr1g0313251 Rosa chinensis HOM05D006202 ORTHO05D008227 3.5e-169 598.6 396 74.7
Migut.B01400 Erythranthe guttata HOM05D006202 ORTHO05D008227 5.9e-169 597.8 390 75.9
MSTRG.28100 Avicennia marina HOM05D006202 ORTHO05D008227 1.0e-168 597.0 352 81.2
Migut.I00539 Erythranthe guttata HOM05D006202 ORTHO05D008227 1.3e-168 596.7 398 75.1
Peaxi162Scf00402g00616 Petunia axillaris HOM05D006202 ORTHO05D008227 1.7e-168 596.3 362 81.2
Lj9C620G10 Lonicera japonica HOM05D006202 ORTHO05D008227 2.2e-168 595.9 347 82.1
arahy.Tifrunner.gnm1.ann1.03K86Q Arachis hypogaea HOM05D006202 ORTHO05D008227 5.0e-168 594.7 379 75.5
Oeu060701.1 Olea europaea HOM05D006202 ORTHO05D008227 5.0e-168 594.7 392 74.7
Aqoxy1G00030 Aquilegia oxysepala HOM05D006202 ORTHO05D008227 6.5e-168 594.3 349 81.1
arahy.Tifrunner.gnm1.ann1.Y9YBLC Arachis hypogaea HOM05D006202 ORTHO05D008227 6.5e-168 594.3 363 78.0
PGSC0003DMG401028974 Solanum tuberosum HOM05D006202 ORTHO05D008227 6.5e-168 594.3 347 82.1
PSO339G0702 Papaver somniferum HOM05D006202 ORTHO05D008227 8.5e-168 594.0 368 78.5
Actinidia21584 Actinidia chinensis HOM05D006202 ORTHO05D008227 1.1e-167 593.6 400 73.8
Medtr2g061710 Medicago truncatula HOM05D006202 ORTHO05D008227 1.1e-167 593.6 400 74.0
CAN.G129.48 Capsicum annuum HOM05D006202 ORTHO05D008227 1.5e-167 593.2 395 74.4
SGA_v2.0_scaffold5G03106 Striga asiatica HOM05D006202 ORTHO05D008227 1.5e-167 593.2 347 82.7
VMungo1080G0924 Vigna mungo HOM05D006202 ORTHO05D008227 3.2e-167 592.0 401 72.6
vmacro21164 Vaccinium macrocarpon HOM05D006202 ORTHO05D008227 1.6e-166 589.7 337 83.4
SalBow5G5675 Salvia bowleyana HOM05D006202 ORTHO05D008227 2.1e-166 589.3 394 74.6
Nn2g15679 Nelumbo nucifera HOM05D006202 ORTHO05D008227 2.7e-166 589.0 375 76.0
Sopen01g033340 Solanum pennellii HOM05D006202 ORTHO05D008227 2.7e-166 589.0 376 76.1
Phvul.005G042000 Phaseolus vulgaris HOM05D006202 ORTHO05D008227 4.7e-166 588.2 346 80.3
ECA234G4350 Erigeron canadensis HOM05D006202 ORTHO05D008227 1.0e-165 587.0 354 79.7
Lsat_1_v5_gn_4_46560 Lactuca sativa HOM05D006202 ORTHO05D008227 1.0e-165 587.0 399 72.9
Solyc01g073730.4 Solanum lycopersicum HOM05D006202 ORTHO05D008227 1.0e-165 587.0 375 76.3
Cc02_g26930 Coffea canephora HOM05D006202 ORTHO05D008227 1.8e-165 586.3 398 72.4
Rhsim03G0068600 Rhododendron simsii HOM05D006202 ORTHO05D008227 3.0e-165 585.5 388 74.0
arahy.Tifrunner.gnm1.ann1.YK6119 Arachis hypogaea HOM05D006202 ORTHO05D008227 5.2e-165 584.7 379 74.7
Sed0014986 Sechium edule HOM05D006202 ORTHO05D008227 6.8e-165 584.3 380 75.3
Sc10g0005310 Simmondsia chinensis HOM05D006202 ORTHO05D008227 6.8e-165 584.3 377 75.9
FAN04G1730 Fragaria x ananassa HOM05D006202 ORTHO05D008227 2.0e-164 582.8 332 82.8
Gohir.D08G018900 Gossypium hirsutum HOM05D006202 ORTHO05D008227 4.4e-164 581.6 392 71.7
FvH4_5g30330 Fragaria vesca HOM05D006202 ORTHO05D008227 7.5e-164 580.9 332 82.8
Gorai.004G013400 Gossypium raimondii HOM05D006202 ORTHO05D008227 1.3e-163 580.1 392 71.7
HanXRQChr16g0520351 Helianthus annuus HOM05D006202 ORTHO05D008227 2.2e-163 579.3 355 78.6
FAN18G2168 Fragaria x ananassa HOM05D006202 ORTHO05D008227 2.8e-163 578.9 332 82.5
Thecc.09G200100 Theobroma cacao HOM05D006202 ORTHO05D008227 2.8e-163 578.9 390 72.6
Eucgr.A00079 Eucalyptus grandis HOM05D006202 ORTHO05D008227 3.7e-163 578.6 386 73.8
FAN08G1924 Fragaria x ananassa HOM05D006202 ORTHO05D008227 3.7e-163 578.6 332 82.2
ATR0605G327 Amborella trichopoda HOM05D006202 ORTHO05D008227 4.9e-163 578.2 375 73.9
COL.COLO4_07529 Corchorus olitorius HOM05D006202 ORTHO05D008227 6.3e-163 577.8 392 74.0
Eucgr.A00275 Eucalyptus grandis HOM05D006202 ORTHO05D008227 8.3e-163 577.4 386 74.1
FAN13G0191 Fragaria x ananassa HOM05D006202 ORTHO05D008227 8.3e-163 577.4 334 82.3
Gohir.A08G008900 Gossypium hirsutum HOM05D006202 ORTHO05D008227 1.1e-162 577.0 392 70.9
ClCG09G003710 Citrullus lanatus HOM05D006202 ORTHO05D008227 1.4e-162 576.6 398 71.4
Phvul.005G041900 Phaseolus vulgaris HOM05D006202 ORTHO05D008227 2.4e-162 575.9 327 82.9
Duzib168G0949 Durio zibethinus HOM05D006202 ORTHO05D008227 7.0e-162 574.3 390 72.3
Os12g0507000 Oryza sativa ssp. japonica HOM05D006202 ORTHO05D008227 7.0e-162 574.3 364 75.0
Os02g0258900 Oryza sativa ssp. japonica HOM05D006202 ORTHO05D008227 1.2e-161 573.5 355 76.1
Ah.14g085700 Amaranthus hybridus HOM05D006202 ORTHO05D008227 2.7e-161 572.4 348 78.4
Ca_03201_v3 Cicer arietinum L. HOM05D006202 ORTHO05D008227 2.7e-161 572.4 366 75.7
Zm00001eb244230 Zea mays HOM05D006202 ORTHO05D008227 1.0e-160 570.5 362 74.6
AUR62036652 Chenopodium quinoa HOM05D006202 ORTHO05D008227 1.7e-160 569.7 374 72.7
CANSAT80G0703 Cannabis sativa HOM05D006202 ORTHO05D008227 5.0e-160 568.2 406 70.9
AUR62034625 Chenopodium quinoa HOM05D006202 ORTHO05D008227 1.5e-159 566.6 374 72.7
Sabra09G0015400 Salix brachista HOM05D006202 ORTHO05D008227 1.9e-159 566.2 460 64.6
DCAR_001807 Daucus carota HOM05D006202 ORTHO05D008227 9.5e-159 563.9 347 77.5
unitig_749.g13486 Utricularia gibba HOM05D006202 ORTHO05D008227 1.8e-157 559.7 355 75.2
CsaV3_7G031490 Cucumis sativus L. HOM05D006202 ORTHO05D008227 1.2e-156 557.0 390 70.5
EL10Ac3g06182 Beta vulgaris HOM05D006202 ORTHO05D008227 1.4e-154 550.1 361 74.0
HPP92_023784 Vanilla planifolia HOM05D006202 ORTHO05D008227 1.6e-153 546.6 347 74.9
Pp3c5_22480 Physcomitrium patens HOM05D006202 ORTHO05D008227 9.2e-146 520.8 330 75.2
CARHR125690 Cardamine hirsuta HOM05D006202 ORTHO05D008227 1.7e-144 516.5 278 92.8
Mapoly0045s0149 Marchantia polymorpha HOM05D006202 ORTHO05D008227 5.0e-144 515.0 363 68.6
SEGI_40145 Sequoiadendron giganteum HOM05D006202 ORTHO05D008227 3.3e-143 512.3 352 72.2
SMO361G0213 Selaginella moellendorffii HOM05D006202 ORTHO05D008227 2.8e-142 509.2 363 69.1
CDE06G1615 Ceratophyllum demersum HOM05D006202 ORTHO05D008227 5.8e-140 501.5 363 69.1
CBR_g36677 Chara braunii HOM05D006202 ORTHO05D008227 4.1e-138 495.4 359 66.3
Actinidia15848 Actinidia chinensis HOM05D006202 ORTHO05D008227 2.3e-136 489.6 393 63.9
Potri.001G230604 Populus trichocarpa HOM05D006202 ORTHO05D008227 5.4e-130 468.4 399 62.2
arahy.Tifrunner.gnm1.ann1.JS3HL2 Arachis hypogaea HOM05D006202 ORTHO05D008227 4.6e-129 465.3 370 64.3
MCO15G349 Micromonas commoda HOM05D006202 ORTHO05D008227 6.2e-126 454.9 329 65.0
Cre13.g602901 Chlamydomonas reinhardtii HOM05D006202 ORTHO05D008227 9.9e-116 421.0 376 57.7
TAR369G1105 Trochodendron aralioides HOM05D006202 ORTHO05D008227 5.6e-111 405.2 294 68.0
PRCOL_00002201 Prasinoderma coloniale HOM05D006202 ORTHO05D008227 1.4e-109 400.6 328 58.2
MELO3C023505.2 Cucumis melo HOM05D006202 ORTHO05D008227 1.2e-105 387.5 285 66.3
Hund12940 Selenicereus undatus HOM05D006202 ORTHO05D008227 1.2e-105 387.5 260 71.2
Pp3c6_6420 Physcomitrium patens HOM05D006202 ORTHO05D008227 1.6e-105 387.1 327 59.9
Psat1g128920 Pisum sativum HOM05D006202 ORTHO05D008227 2.1e-105 386.7 283 67.8
Cfa022704 Carpinus fangiana HOM05D006202 ORTHO05D008227 4.9e-99 365.5 371 50.9
Haze_27006 Corylus avellana HOM05D006202 ORTHO05D008699 1.8e-69 267.3 287 46.0
SHI12251 Sapria himalayana HOM05D006202 ORTHO05D008227 1.0e-64 251.5 210 61.4
SHI12244 Sapria himalayana HOM05D006202 ORTHO05D008227 2.6e-63 246.9 165 72.7
AagrBONN_evm.TU.Sc2ySwM_344.4902 Anthoceros agrestis HOM05D006202 ORTHO05D008227 4.5e-60 236.1 183 62.8
SHI12245 Sapria himalayana HOM05D006202 ORTHO05D008227 3.0e-48 196.8 182 56.6
ATR0605G108 Amborella trichopoda HOM05D006202 ORTHO05D008227 1.4e-45 188.0 131 69.5
A05p13580 Brassica napus HOM05D006202 ORTHO05D033532 4.4e-15 86.7 88 54.5
BraA05t20295Z Brassica rapa HOM05D006202 ORTHO05D033532 4.4e-15 86.7 88 54.5
SHI34064 Sapria himalayana HOM05D006202 ORTHO05D367267 2.7e-12 77.4 163 35.0
TAR623G0116 Trochodendron aralioides HOM05D006202 ORTHO05D414173 8.1e-09 65.9 35 80.0
BcaB05g23580 Brassica carinata HOM05D000207 ORTHO05D091031 3.1e-08 63.9 68 58.8


User provided reference genes

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