Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G26670 Arabidopsis lyrata HOM05D012749 ORTHO05D000594 1.6e-97 359.4 173 100.0
AT2G31420 Arabidopsis thaliana HOM05D000896 ORTHO05D000594 1.2e-52 210.3 211 55.9
Carub.0004s1274 Capsella rubella HOM05D000896 ORTHO05D000594 2.4e-29 132.9 197 41.1
BcaB06g28546 Brassica carinata HOM05D000896 ORTHO05D000594 2.9e-27 125.9 199 41.2
A04p24270 Brassica napus HOM05D000896 ORTHO05D000594 5.0e-27 125.2 204 41.2
BraA04t17946Z Brassica rapa HOM05D000896 ORTHO05D000594 5.5e-26 121.7 204 40.7
BcaB01g01586 Brassica carinata HOM05D000896 ORTHO05D000594 3.6e-25 119.0 173 41.0
BcaC02g07988 Brassica carinata HOM05D000896 ORTHO05D000594 1.0e-24 117.5 204 39.2
BcaC02g07983 Brassica carinata HOM05D000896 ORTHO05D000594 1.8e-24 116.7 204 38.2
C04p61050 Brassica napus HOM05D000896 ORTHO05D000594 1.8e-24 116.7 204 38.2
BolC4t27592H Brassica oleracea HOM05D000896 ORTHO05D000594 1.8e-24 116.7 204 38.2
Carub.0004s1350 Capsella rubella HOM05D000896 ORTHO05D000594 1.4e-21 107.1 180 38.9
Carub.0004s1432 Capsella rubella HOM05D000896 ORTHO05D000594 1.4e-21 107.1 173 39.3
BolC4t27593H Brassica oleracea HOM05D000896 ORTHO05D000594 1.6e-20 103.6 182 39.6
Carub.0004s1399 Capsella rubella HOM05D000896 ORTHO05D000594 1.6e-20 103.6 171 39.2
Thhalv10012233m.g Eutrema salsugineum HOM05D000896 ORTHO05D000594 2.0e-20 103.2 141 41.1
Sp4g13910 Schrenkiella parvula HOM05D000896 ORTHO05D000594 2.0e-20 103.2 200 40.5
AL4G28060 Arabidopsis lyrata HOM05D000896 ORTHO05D000594 2.2e-19 99.8 175 36.0
AT2G27410 Arabidopsis thaliana HOM05D000896 ORTHO05D000594 2.7e-17 92.8 158 36.1
C04p61100 Brassica napus HOM05D000896 ORTHO05D000594 4.0e-16 89.0 155 36.1
C09p35640 Brassica napus HOM05D000896 ORTHO05D000594 8.8e-16 87.8 128 43.8
AL4G27540 Arabidopsis lyrata HOM05D000896 ORTHO05D000594 7.5e-15 84.7 151 33.8
C04p61060 Brassica napus HOM05D000896 ORTHO05D000594 9.8e-15 84.3 160 39.4
C04p61020 Brassica napus HOM05D000896 ORTHO05D000594 1.3e-14 84.0 160 38.8
Aa31LG5G5500 Aethionema arabicum HOM05D000896 ORTHO05D000594 2.8e-14 82.8 173 32.4
A09p28140 Brassica napus HOM05D000896 ORTHO05D000594 2.8e-14 82.8 83 48.2
BcaC02g07987 Brassica carinata HOM05D000896 ORTHO05D000594 3.7e-14 82.4 160 38.1
BcaC04g21106 Brassica carinata HOM05D000896 ORTHO05D000594 6.3e-14 81.6 146 38.4
BolC9t56400H Brassica oleracea HOM05D000896 ORTHO05D000594 6.3e-14 81.6 146 38.4
AT2G32645 Arabidopsis thaliana HOM05D000896 ORTHO05D000594 3.1e-13 79.3 133 36.1
THA.LOC104827386 Tarenaya hassleriana HOM05D000896 ORTHO05D000594 4.1e-13 79.0 183 31.1
THA.LOC104827387 Tarenaya hassleriana HOM05D000896 ORTHO05D000594 4.1e-13 79.0 183 31.1
Aa31LG5G5490 Aethionema arabicum HOM05D000896 ORTHO05D000594 2.7e-12 76.3 167 30.5
Aa31sc1610G20 Aethionema arabicum HOM05D000896 ORTHO05D000594 2.7e-12 76.3 167 30.5
BcaC02g07986 Brassica carinata HOM05D012749 ORTHO05D024259 4.5e-12 75.5 133 31.6
C04p61070 Brassica napus HOM05D012749 ORTHO05D024259 4.5e-12 75.5 133 31.6
BolC4t27591H Brassica oleracea HOM05D012749 ORTHO05D024259 4.5e-12 75.5 133 31.6
Carub.0003s2555 Capsella rubella HOM05D000896 ORTHO05D000594 5.0e-11 72.0 161 31.1
A04p24250 Brassica napus HOM05D012749 ORTHO05D024259 8.5e-11 71.2 146 32.2
BraA04t17944Z Brassica rapa HOM05D012749 ORTHO05D024259 1.1e-10 70.9 146 32.2
Carub.0004s1302 Capsella rubella HOM05D000896 ORTHO05D000594 7.2e-10 68.2 155 29.0
Thhalv10009984m.g Eutrema salsugineum HOM05D000896 ORTHO05D000594 9.4e-10 67.8 151 31.8
BcaB07g31212 Brassica carinata HOM05D000896 ORTHO05D000594 1.2e-09 67.4 153 30.7
AT2G31460 Arabidopsis thaliana HOM05D012749 ORTHO05D000594 1.6e-09 67.0 131 33.6
BcaC04g22224 Brassica carinata HOM05D000896 ORTHO05D000594 2.1e-09 66.6 164 29.3
BolC9t55092H Brassica oleracea HOM05D000896 ORTHO05D000594 3.6e-09 65.9 164 29.3
C09p21870 Brassica napus HOM05D000896 ORTHO05D000594 6.1e-09 65.1 153 30.1
A09p17570 Brassica napus HOM05D000896 ORTHO05D000594 8.0e-09 64.7 153 29.4
BraA09t37387Z Brassica rapa HOM05D000896 ORTHO05D000594 8.0e-09 64.7 153 29.4
Duzib251G0772 Durio zibethinus HOM05D000896 ORTHO05D000594 1.8e-08 63.5 173 27.2
CARHR125400 Cardamine hirsuta HOM05D000896 ORTHO05D000594 5.2e-08 62.0 156 31.4
AL1G46070 Arabidopsis lyrata HOM05D000896 ORTHO05D000594 1.2e-07 60.8 144 31.2
BraA09t38376Z Brassica rapa HOM05D000896 ORTHO05D000594 1.2e-07 60.8 53 52.8
CARHR125380 Cardamine hirsuta HOM05D000896 ORTHO05D000594 1.2e-07 60.8 135 30.4
BolC4t27590H Brassica oleracea HOM05D000896 ORTHO05D000594 2.0e-07 60.1 85 45.9
TPR.G9525 Trifolium pratense HOM05D000896 ORTHO05D000594 4.4e-07 58.9 73 39.7
AT1G32030 Arabidopsis thaliana HOM05D000896 ORTHO05D000594 5.7e-07 58.5 145 31.0
Carub.0001s0530 Capsella rubella HOM05D000896 ORTHO05D000594 7.5e-07 58.2 136 30.9
Sp6g07490 Schrenkiella parvula HOM05D000896 ORTHO05D000594 9.8e-07 57.8 128 32.8
Carub.0007s1353 Capsella rubella HOM05D000896 ORTHO05D000594 1.7e-06 57.0 147 26.5
Thhalv10024065m.g Eutrema salsugineum HOM05D000896 ORTHO05D000594 1.7e-06 57.0 62 46.8
PGSC0003DMG400000106 Solanum tuberosum HOM05D015341 ORTHO05D011718 1.7e-06 57.0 68 35.3
Sopen11g001210 Solanum pennellii HOM05D000896 ORTHO05D000594 2.8e-06 56.2 138 31.2
SpUn0479_0020 Schrenkiella parvula HOM05D000896 ORTHO05D000594 4.9e-06 55.5 163 30.1
THA.LOC104825400 Tarenaya hassleriana HOM05D000896 ORTHO05D000594 4.9e-06 55.5 174 23.6
PGSC0003DMG400035412 Solanum tuberosum HOM05D000896 ORTHO05D000594 6.3e-06 55.1 140 31.4
AL1G15520 Arabidopsis lyrata HOM05D000896 ORTHO05D000594 8.3e-06 54.7 162 27.8
BcaC02g07964 Brassica carinata HOM05D000896 ORTHO05D000594 8.3e-06 54.7 172 26.2
Thhalv10012343m.g Eutrema salsugineum HOM05D000896 ORTHO05D000594 8.3e-06 54.7 124 30.6


User provided reference genes

Program Settings