Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G26610 Arabidopsis lyrata HOM05D000007 ORTHO05D000521 4.5e-244 847.4 410 100.0
Aa31LG5G21110 Aethionema arabicum HOM05D000007 ORTHO05D000521 6.9e-27 125.9 428 27.1
THA.LOC104801934 Tarenaya hassleriana HOM05D000007 ORTHO05D000521 3.4e-26 123.6 448 28.8
THA.LOC104804664 Tarenaya hassleriana HOM05D000007 ORTHO05D000521 7.9e-23 112.5 319 30.7
Atru.chr4.13 Acer truncatum HOM05D000007 ORTHO05D000521 1.3e-20 105.1 294 29.3
Lj8A117T66 Lonicera japonica HOM05D000007 ORTHO05D000521 2.2e-20 104.4 309 24.6
Cpa.g.sc483.2 Carica papaya HOM05D000007 ORTHO05D000521 6.3e-20 102.8 314 28.3
Haze_03323 Corylus avellana HOM05D000007 ORTHO05D000521 3.1e-19 100.5 305 26.6
Ciclev10011634m.g Citrus clementina HOM05D000007 ORTHO05D000521 4.1e-19 100.1 305 27.5
Cfa010369 Carpinus fangiana HOM05D000007 ORTHO05D000521 2.0e-18 97.8 333 24.6
QL06p035449 Quercus lobata HOM05D000007 ORTHO05D000521 1.0e-17 95.5 317 24.0
CiPaw.13G053300 Carya illinoinensis HOM05D000007 ORTHO05D000521 3.8e-17 93.6 317 24.6
THA.LOC104817644 Tarenaya hassleriana HOM05D000007 ORTHO05D000521 3.2e-16 90.5 141 39.0
Cfa014273 Carpinus fangiana HOM05D000007 ORTHO05D000521 7.9e-15 85.9 409 23.2
Dinv34353 Davidia involucrata HOM05D000007 ORTHO05D000521 1.1e-13 82.0 321 24.6
Dinv34341 Davidia involucrata HOM05D000007 ORTHO05D000521 3.3e-13 80.5 307 25.1
Hma1.2p1_0213F.1_g090620 Hydrangea macrophylla HOM05D000007 ORTHO05D000521 1.3e-12 78.6 329 23.1
MSTRG.27886 Avicennia marina HOM05D000007 ORTHO05D000521 1.7e-12 78.2 160 29.4
Rhsim07G0064200 Rhododendron simsii HOM05D000007 ORTHO05D000521 4.8e-12 76.6 314 24.8
RcHm_v2.0_Chr2g0131131 Rosa chinensis HOM05D000007 ORTHO05D000521 1.1e-11 75.5 325 23.7
Dinv29686 Davidia involucrata HOM05D000007 ORTHO05D000521 7.0e-11 72.8 156 30.8
Oeu016645.1 Olea europaea HOM05D000007 ORTHO05D000521 1.6e-10 71.6 160 28.8
Prupe.3G112200 Prunus persica HOM05D000007 ORTHO05D000521 2.6e-10 70.9 329 24.6
CiPaw.07G080600 Carya illinoinensis HOM05D000007 ORTHO05D000521 3.5e-10 70.5 279 26.9
Rhsim04G0044500 Rhododendron simsii HOM05D005617 ORTHO05D000521 4.5e-10 70.1 218 27.1
DCAR_022309 Daucus carota HOM05D000007 ORTHO05D000521 5.9e-10 69.7 298 24.2
Prupe.3G112400 Prunus persica HOM05D000007 ORTHO05D000521 5.9e-10 69.7 323 25.1
Hma1.2p1_1251F.1_g270330 Hydrangea macrophylla HOM05D000007 ORTHO05D000521 1.0e-09 68.9 312 22.4
FAN14G1599 Fragaria x ananassa HOM05D018771 ORTHO05D000521 1.3e-09 68.6 337 22.6
Prupe.3G111700 Prunus persica HOM05D000007 ORTHO05D000521 2.2e-09 67.8 343 23.3
TPR.G34402 Trifolium pratense HOM05D000007 ORTHO05D000521 2.9e-09 67.4 323 22.3
CSS0009149 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000521 3.8e-09 67.0 263 23.2
Medtr4g134560 Medicago truncatula HOM05D000007 ORTHO05D000521 6.5e-09 66.2 299 22.4
Medtr5g022900 Medicago truncatula HOM05D000007 ORTHO05D000521 1.5e-08 65.1 313 23.3
Rhsim04G0040800 Rhododendron simsii HOM05D000007 ORTHO05D000521 1.5e-08 65.1 276 23.6
RcHm_v2.0_Chr6g0309591 Rosa chinensis HOM05D000007 ORTHO05D000521 1.9e-08 64.7 266 22.6
Dinv05848 Davidia involucrata HOM05D000007 ORTHO05D000521 2.5e-08 64.3 115 28.7
Medtr5g027370 Medicago truncatula HOM05D000007 ORTHO05D000521 2.5e-08 64.3 313 21.7
Psat0s3499g0040 Pisum sativum HOM05D000007 ORTHO05D000521 2.5e-08 64.3 362 22.9
Psat2g140960 Pisum sativum HOM05D000007 ORTHO05D000521 2.5e-08 64.3 298 22.5
Medtr5g027330 Medicago truncatula HOM05D000007 ORTHO05D000521 3.2e-08 63.9 313 21.7
Rhsim01G0070300 Rhododendron simsii HOM05D000007 ORTHO05D000521 3.2e-08 63.9 339 21.8
Aqoxy2G03479 Aquilegia oxysepala HOM05D000007 ORTHO05D000521 4.2e-08 63.5 134 29.1
Cfa014274 Carpinus fangiana HOM05D000007 ORTHO05D000521 4.2e-08 63.5 125 29.6
Prupe.1G146900 Prunus persica HOM05D000007 ORTHO05D000521 4.2e-08 63.5 139 31.7
Aqoxy3G03972 Aquilegia oxysepala HOM05D000007 ORTHO05D000017 5.5e-08 63.2 144 27.8
BcaC01g04329 Brassica carinata HOM05D000007 ORTHO05D000017 7.2e-08 62.8 95 33.7
DCAR_022308 Daucus carota HOM05D000007 ORTHO05D000521 9.4e-08 62.4 295 23.7
SGA_v2.0_scaffold8G04467 Striga asiatica HOM05D000007 ORTHO05D000521 9.4e-08 62.4 128 28.1
Medtr5g022090 Medicago truncatula HOM05D000007 ORTHO05D000521 1.2e-07 62.0 301 23.3
TPR.G13072 Trifolium pratense HOM05D000007 ORTHO05D000521 1.2e-07 62.0 304 23.4
MD01G1181800 Malus domestica HOM05D000007 ORTHO05D000521 1.6e-07 61.6 306 21.9
TAR624G0469 Trochodendron aralioides HOM05D000007 ORTHO05D000521 1.6e-07 61.6 266 23.3
Lj2P412T54 Lonicera japonica HOM05D000007 ORTHO05D000521 2.1e-07 61.2 105 30.5
TPR.G36982 Trifolium pratense HOM05D000007 ORTHO05D000017 2.1e-07 61.2 121 35.5
Hma1.2p1_0157F.1_g069160 Hydrangea macrophylla HOM05D000007 ORTHO05D000521 2.7e-07 60.8 162 25.9
Hma1.2p1_0157F.1_g069186 Hydrangea macrophylla HOM05D000007 ORTHO05D000521 2.7e-07 60.8 162 25.9
Medtr5g010660 Medicago truncatula HOM05D000007 ORTHO05D000521 2.7e-07 60.8 293 21.8
SalBow6G1058 Salvia bowleyana HOM05D000007 ORTHO05D000521 2.7e-07 60.8 127 28.3
SalBow6G2035 Salvia bowleyana HOM05D000007 ORTHO05D000521 2.7e-07 60.8 127 28.3
DCAR_000593 Daucus carota HOM05D000007 ORTHO05D000521 3.6e-07 60.5 132 28.8
Glyma.19G048600 Glycine max HOM05D000007 ORTHO05D000017 3.6e-07 60.5 223 20.6
Lj4g0010166 Lotus japonicus HOM05D000007 ORTHO05D000521 4.7e-07 60.1 302 22.5
QL11p009377 Quercus lobata HOM05D000007 ORTHO05D000017 4.7e-07 60.1 90 34.4
Thecc.06G234200 Theobroma cacao HOM05D000007 ORTHO05D000017 4.7e-07 60.1 158 29.7
CiPaw.09G103200 Carya illinoinensis HOM05D000007 ORTHO05D000017 6.1e-07 59.7 102 30.4
Duzib151G0963 Durio zibethinus HOM05D000007 ORTHO05D000017 6.1e-07 59.7 108 32.4
Lj2P412T50 Lonicera japonica HOM05D000007 ORTHO05D000521 6.1e-07 59.7 105 29.5
Lalb_Chr17g0348371 Lupinus albus HOM05D000007 ORTHO05D000521 6.1e-07 59.7 310 20.6
Medtr4g133170 Medicago truncatula HOM05D000007 ORTHO05D000017 6.1e-07 59.7 110 34.5
PSO832G0561 Papaver somniferum HOM05D000007 ORTHO05D000676 6.1e-07 59.7 238 27.7
Potri.001G129200 Populus trichocarpa HOM05D000007 ORTHO05D000521 6.1e-07 59.7 130 28.5
Aqoxy4G00563 Aquilegia oxysepala HOM05D000007 ORTHO05D000521 8.0e-07 59.3 119 31.9
A03p34570 Brassica napus HOM05D000007 ORTHO05D000017 8.0e-07 59.3 97 36.1
BraA03t12634Z Brassica rapa HOM05D000007 ORTHO05D000017 8.0e-07 59.3 97 36.1
CANSAT56G1762 Cannabis sativa HOM05D000007 ORTHO05D000017 8.0e-07 59.3 116 30.2
COL.COLO4_13989 Corchorus olitorius HOM05D000007 ORTHO05D000017 8.0e-07 59.3 108 31.5
Lj8C594T5 Lonicera japonica HOM05D000007 ORTHO05D000521 8.0e-07 59.3 279 22.6
MD17G1124300 Malus domestica HOM05D000007 ORTHO05D000017 8.0e-07 59.3 103 33.0
Medtr5g022040 Medicago truncatula HOM05D000007 ORTHO05D000521 8.0e-07 59.3 140 27.1
Duzib160G0463 Durio zibethinus HOM05D000007 ORTHO05D000017 1.0e-06 58.9 140 30.0
Psat4g004720 Pisum sativum HOM05D000007 ORTHO05D000017 1.0e-06 58.9 119 31.1
AL7G42560 Arabidopsis lyrata HOM05D000007 ORTHO05D000017 1.4e-06 58.5 116 27.6
BcaB03g14658 Brassica carinata HOM05D000007 ORTHO05D000017 1.4e-06 58.5 111 35.1
BolC3t16484H Brassica oleracea HOM05D000007 ORTHO05D000017 1.4e-06 58.5 97 36.1
AUR62002322 Chenopodium quinoa HOM05D000007 ORTHO05D000521 1.4e-06 58.5 226 24.3
MD10G1332600 Malus domestica HOM05D000007 ORTHO05D000017 1.4e-06 58.5 150 24.7
Manes.01G095600 Manihot esculenta HOM05D000007 ORTHO05D000017 1.4e-06 58.5 97 32.0
TPR.G12142 Trifolium pratense HOM05D002637 ORTHO05D009046 1.8e-06 58.2 125 26.4
HanXRQChr10g0296621 Helianthus annuus HOM05D000007 ORTHO05D000521 2.3e-06 57.8 122 29.5
PSO591G0160 Papaver somniferum HOM05D000007 ORTHO05D000676 2.3e-06 57.8 233 24.9
Rhsim04G0041100 Rhododendron simsii HOM05D000007 ORTHO05D000521 2.3e-06 57.8 229 23.1
Aqoxy5G02264 Aquilegia oxysepala HOM05D000007 ORTHO05D000017 3.0e-06 57.4 187 23.5
BcaB03g14663 Brassica carinata HOM05D000007 ORTHO05D000017 3.0e-06 57.4 114 31.6
CSS0004500 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000017 3.0e-06 57.4 138 29.0
Thhalv10020779m.g Eutrema salsugineum HOM05D000007 ORTHO05D000017 3.0e-06 57.4 114 35.1
Glyma.19G048000 Glycine max HOM05D000007 ORTHO05D000017 3.0e-06 57.4 101 27.7
Atru.chr1.119 Acer truncatum HOM05D000007 ORTHO05D000017 4.0e-06 57.0 255 21.6
C03p42040 Brassica napus HOM05D000007 ORTHO05D000017 4.0e-06 57.0 97 35.1
Rhsim07G0064500 Rhododendron simsii HOM05D000007 ORTHO05D000521 4.0e-06 57.0 135 25.9
TPR.G18189 Trifolium pratense HOM05D000007 ORTHO05D000521 4.0e-06 57.0 166 25.3
COL.COLO4_31897 Corchorus olitorius HOM05D000007 ORTHO05D000017 5.2e-06 56.6 133 24.1
FvH4_1g04460 Fragaria vesca HOM05D000007 ORTHO05D020700 5.2e-06 56.6 81 28.4
AUR62028289 Chenopodium quinoa HOM05D000007 ORTHO05D000521 6.7e-06 56.2 152 26.3
Haze_08061 Corylus avellana HOM05D000007 ORTHO05D000521 6.7e-06 56.2 128 23.4
Gohir.A06G153400 Gossypium hirsutum HOM05D000007 ORTHO05D000017 6.7e-06 56.2 146 29.5
Rhsim01G0071900 Rhododendron simsii HOM05D000007 ORTHO05D000521 6.7e-06 56.2 131 26.0
Medtr5g021880 Medicago truncatula HOM05D000007 ORTHO05D000521 8.8e-06 55.8 159 26.4
Rhsim11G0117300 Rhododendron simsii HOM05D000007 ORTHO05D000521 8.8e-06 55.8 113 33.6
TAR365G1056 Trochodendron aralioides HOM05D000007 ORTHO05D000521 8.8e-06 55.8 88 30.7


User provided reference genes

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