Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G26530 Arabidopsis lyrata HOM05D006246 ORTHO05D007932 5.0e-25 117.9 109 100.0
AT2G31305 Arabidopsis thaliana HOM05D006246 ORTHO05D007932 9.5e-24 113.6 109 91.7
BcaB02g10382 Brassica carinata HOM05D006246 ORTHO05D007932 1.5e-21 106.3 109 77.1
CARHR124920 Cardamine hirsuta HOM05D006246 ORTHO05D007932 1.5e-21 106.3 109 78.0
Thhalv10017462m.g Eutrema salsugineum HOM05D006246 ORTHO05D007932 4.4e-21 104.8 109 77.1
BcaB06g28444 Brassica carinata HOM05D006246 ORTHO05D007932 5.7e-21 104.4 110 91.8
Carub.0004s1261 Capsella rubella HOM05D006246 ORTHO05D007932 5.7e-21 104.4 55 100.0
C04p19050 Brassica napus HOM05D006246 ORTHO05D007932 9.8e-21 103.6 110 90.9
Sp4g13780 Schrenkiella parvula HOM05D006246 ORTHO05D007932 1.3e-20 103.2 113 77.9
BcaC02g11223 Brassica carinata HOM05D006246 ORTHO05D007932 1.7e-20 102.8 110 78.2
BolC4t23440H Brassica oleracea HOM05D006246 ORTHO05D007932 1.7e-20 102.8 110 78.2
BcaB06g28525 Brassica carinata HOM05D006246 ORTHO05D007932 2.8e-20 102.1 111 86.5
A04p24110 Brassica napus HOM05D006246 ORTHO05D007932 2.8e-20 102.1 111 90.1
C04p60820 Brassica napus HOM05D006246 ORTHO05D007932 2.8e-20 102.1 111 90.1
BolC4t27573H Brassica oleracea HOM05D006246 ORTHO05D007932 2.8e-20 102.1 111 86.5
BraA04t17931Z Brassica rapa HOM05D006246 ORTHO05D007932 2.8e-20 102.1 111 90.1
A05p14300 Brassica napus HOM05D006246 ORTHO05D007932 6.3e-20 100.9 110 74.5
BraA05t20360Z Brassica rapa HOM05D006246 ORTHO05D007932 6.3e-20 100.9 110 89.1
Sp1g40730 Schrenkiella parvula HOM05D006246 ORTHO05D007932 2.4e-19 99.0 55 96.4
Aa31LG5G5660 Aethionema arabicum HOM05D006246 ORTHO05D007932 7.0e-19 97.4 55 92.7
AL2G35340 Arabidopsis lyrata HOM05D006246 ORTHO05D007932 4.3e-16 88.2 48 97.9
Carub.0002s2226 Capsella rubella HOM05D006246 ORTHO05D007932 1.6e-15 86.3 56 85.7
THA.LOC104826210 Tarenaya hassleriana HOM05D006246 ORTHO05D007932 2.1e-15 85.9 55 85.5
THA.LOC104800880 Tarenaya hassleriana HOM05D006246 ORTHO05D007932 1.9e-11 72.8 55 72.7
Atru.chr3.3065 Acer truncatum HOM05D006246 ORTHO05D007932 1.3e-09 66.6 54 64.8
Atru.chr13.2337 Acer truncatum HOM05D006246 ORTHO05D007932 2.3e-09 65.9 54 64.8
Cpa.g.sc49.43 Carica papaya HOM05D006246 ORTHO05D007932 1.1e-08 63.5 54 64.8
FAN18G0928 Fragaria x ananassa HOM05D006246 ORTHO05D007932 4.3e-08 61.6 49 67.3
A05p14510 Brassica napus HOM05D006246 ORTHO05D007932 5.6e-08 61.2 43 79.1
BraA05t20382Z Brassica rapa HOM05D006246 ORTHO05D007932 2.1e-07 59.3 43 76.7
SHI11488 Sapria himalayana HOM05D006246 ORTHO05D007932 4.7e-07 58.2 59 59.3
Ciclev10002937m.g Citrus clementina HOM05D006246 ORTHO05D007932 6.2e-07 57.8 54 59.3
Potri.007G101900 Populus trichocarpa HOM05D006246 ORTHO05D007932 8.0e-07 57.4 40 77.5
TWI59G0384 Tripterygium wilfordii HOM05D006246 ORTHO05D007932 1.8e-06 56.2 55 61.8
CARHR068770 Cardamine hirsuta HOM05D006246 ORTHO05D007932 2.3e-06 55.8 40 75.0
EL10Ac1g00152 Beta vulgaris HOM05D006246 ORTHO05D007932 4.0e-06 55.1 56 60.7
Nn5g27268 Nelumbo nucifera HOM05D006246 ORTHO05D007932 4.0e-06 55.1 56 55.4
Actinidia30538 Actinidia chinensis HOM05D006246 ORTHO05D007932 5.2e-06 54.7 54 53.7


User provided reference genes

Program Settings