Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G26270 Arabidopsis lyrata HOM05D008879 ORTHO05D010552 2.3e-38 161.8 83 100.0
AT2G31085 Arabidopsis thaliana HOM05D008879 ORTHO05D010552 7.2e-32 140.2 81 87.7
Carub.0004s1234 Capsella rubella HOM05D008879 ORTHO05D010552 3.6e-31 137.9 81 88.9
CARHR124670 Cardamine hirsuta HOM05D008879 ORTHO05D010552 1.1e-27 126.3 81 80.2
Carub.0004s1233 Capsella rubella HOM05D008879 ORTHO05D010552 1.8e-27 125.6 83 75.9
Sp4g13570 Schrenkiella parvula HOM05D008879 ORTHO05D010552 1.8e-27 125.6 81 79.0
Thhalv10017588m.g Eutrema salsugineum HOM05D008879 ORTHO05D010552 2.6e-26 121.7 81 76.5
AT2G31083 Arabidopsis thaliana HOM05D008879 ORTHO05D010552 3.5e-26 121.3 81 76.5
CARHR124660 Cardamine hirsuta HOM05D008879 ORTHO05D010552 4.5e-26 120.9 83 77.1
A05p14570 Brassica napus HOM05D008879 ORTHO05D010552 7.7e-26 120.2 83 73.5
C03p20490 Brassica napus HOM05D008879 ORTHO05D010552 1.3e-25 119.4 81 79.0
AL4G26260 Arabidopsis lyrata HOM05D008879 ORTHO05D010552 2.2e-25 118.6 81 75.3
BcaC01g05980 Brassica carinata HOM05D008879 ORTHO05D010552 3.8e-25 117.9 81 77.8
BolC3t14429H Brassica oleracea HOM05D008879 ORTHO05D010552 3.8e-25 117.9 81 77.8
BcaC02g11194 Brassica carinata HOM05D008879 ORTHO05D010552 6.5e-25 117.1 83 72.3
C04p19410 Brassica napus HOM05D008879 ORTHO05D010552 6.5e-25 117.1 83 72.3
BolC4t23473H Brassica oleracea HOM05D008879 ORTHO05D010552 6.5e-25 117.1 83 72.3
BcaB06g28488 Brassica carinata HOM05D008879 ORTHO05D010552 1.1e-24 116.3 81 75.3
C04p60330 Brassica napus HOM05D008879 ORTHO05D010552 1.1e-24 116.3 81 75.3
BolC4t27533H Brassica oleracea HOM05D008879 ORTHO05D010552 1.1e-24 116.3 81 75.3
BcaB06g28411 Brassica carinata HOM05D008879 ORTHO05D010552 1.5e-24 115.9 81 74.1
A03p17370 Brassica napus HOM05D008879 ORTHO05D010552 5.5e-24 114.0 82 76.8
BcaB01g04065 Brassica carinata HOM05D008879 ORTHO05D010552 7.2e-24 113.6 81 71.6
A04p23850 Brassica napus HOM05D008879 ORTHO05D010552 7.2e-24 113.6 81 72.8
BraA04t17908Z Brassica rapa HOM05D008879 ORTHO05D010552 7.2e-24 113.6 81 72.8
BraA03t11008Z Brassica rapa HOM05D008879 ORTHO05D010552 3.6e-23 111.3 82 75.6
BcaB02g10362 Brassica carinata HOM05D008879 ORTHO05D010552 4.4e-21 104.4 83 66.3
THA.LOC104826219 Tarenaya hassleriana HOM05D008879 ORTHO05D010552 1.2e-18 96.3 81 61.7
THA.LOC104826220 Tarenaya hassleriana HOM05D008879 ORTHO05D010552 1.2e-18 96.3 81 61.7
THA.LOC104815845 Tarenaya hassleriana HOM05D008879 ORTHO05D010552 3.5e-18 94.7 81 58.0
Aa31LG5G5820 Aethionema arabicum HOM05D008879 ORTHO05D010552 5.5e-16 87.4 59 67.8
Haze_13339 Corylus avellana HOM05D008879 ORTHO05D010552 6.5e-09 63.9 83 50.6
Ciclev10018336m.g Citrus clementina HOM05D008879 ORTHO05D010552 8.5e-09 63.5 83 45.8
TAR624G1413 Trochodendron aralioides HOM05D000001 ORTHO05D000003 2.5e-08 62.0 82 42.7
Cfa014710 Carpinus fangiana HOM05D008879 ORTHO05D010552 7.2e-08 60.5 83 48.2
Potri.001G376200 Populus trichocarpa HOM05D008879 ORTHO05D010552 9.4e-08 60.1 81 43.2
Sabra19G0104400 Salix brachista HOM05D008879 ORTHO05D010552 8.0e-07 57.0 84 39.3
TWI14G0991 Tripterygium wilfordii HOM05D008879 ORTHO05D010552 2.3e-06 55.5 91 40.7
Potri.019G090800 Populus trichocarpa HOM05D008879 ORTHO05D010552 4.0e-06 54.7 79 40.5
Gohir.A01G058000 Gossypium hirsutum HOM05D017499 ORTHO05D010552 6.8e-06 53.9 52 53.8
Gohir.D01G044400 Gossypium hirsutum HOM05D017499 ORTHO05D010552 6.8e-06 53.9 52 53.8
Gorai.002G063600 Gossypium raimondii HOM05D017499 ORTHO05D010552 6.8e-06 53.9 52 53.8
Lsat_1_v5_gn_7_23461 Lactuca sativa HOM05D012232 ORTHO05D010552 6.8e-06 53.9 76 38.2


User provided reference genes

Program Settings