Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G26260 Arabidopsis lyrata HOM05D008879 ORTHO05D010552 3.6e-36 154.5 82 100.0
AT2G31083 Arabidopsis thaliana HOM05D008879 ORTHO05D010552 1.2e-31 139.4 82 90.2
Carub.0004s1233 Capsella rubella HOM05D008879 ORTHO05D010552 1.4e-27 125.9 81 80.2
Carub.0004s1234 Capsella rubella HOM05D008879 ORTHO05D010552 3.1e-27 124.8 82 81.7
C03p20490 Brassica napus HOM05D008879 ORTHO05D010552 4.5e-26 120.9 82 80.5
BcaC01g05980 Brassica carinata HOM05D008879 ORTHO05D010552 1.3e-25 119.4 82 79.3
BolC3t14429H Brassica oleracea HOM05D008879 ORTHO05D010552 1.3e-25 119.4 82 79.3
AT2G31085 Arabidopsis thaliana HOM05D008879 ORTHO05D010552 1.7e-25 119.0 82 76.8
A05p14570 Brassica napus HOM05D008879 ORTHO05D010552 2.9e-25 118.2 81 75.3
Thhalv10017588m.g Eutrema salsugineum HOM05D008879 ORTHO05D010552 2.9e-25 118.2 82 74.4
CARHR124670 Cardamine hirsuta HOM05D008879 ORTHO05D010552 8.4e-25 116.7 81 76.5
Sp4g13570 Schrenkiella parvula HOM05D008879 ORTHO05D010552 1.1e-24 116.3 82 74.4
AL4G26270 Arabidopsis lyrata HOM05D008879 ORTHO05D010552 1.4e-24 115.9 81 75.3
BcaC02g11194 Brassica carinata HOM05D008879 ORTHO05D010552 2.4e-24 115.2 81 74.1
C04p19410 Brassica napus HOM05D008879 ORTHO05D010552 2.4e-24 115.2 81 74.1
BolC4t23473H Brassica oleracea HOM05D008879 ORTHO05D010552 2.4e-24 115.2 81 74.1
BcaB06g28488 Brassica carinata HOM05D008879 ORTHO05D010552 3.2e-24 114.8 82 74.4
A03p17370 Brassica napus HOM05D008879 ORTHO05D010552 3.2e-24 114.8 83 78.3
C04p60330 Brassica napus HOM05D008879 ORTHO05D010552 3.2e-24 114.8 82 74.4
BolC4t27533H Brassica oleracea HOM05D008879 ORTHO05D010552 3.2e-24 114.8 82 74.4
CARHR124660 Cardamine hirsuta HOM05D008879 ORTHO05D010552 3.2e-24 114.8 81 75.3
BcaB01g04065 Brassica carinata HOM05D008879 ORTHO05D010552 9.3e-24 113.2 82 72.0
A04p23850 Brassica napus HOM05D008879 ORTHO05D010552 2.1e-23 112.1 82 72.0
BraA03t11008Z Brassica rapa HOM05D008879 ORTHO05D010552 2.1e-23 112.1 83 77.1
BraA04t17908Z Brassica rapa HOM05D008879 ORTHO05D010552 2.1e-23 112.1 82 72.0
BcaB06g28411 Brassica carinata HOM05D008879 ORTHO05D010552 4.6e-23 110.9 82 72.0
BcaB02g10362 Brassica carinata HOM05D008879 ORTHO05D010552 1.5e-21 105.9 81 70.4
THA.LOC104826219 Tarenaya hassleriana HOM05D008879 ORTHO05D010552 1.3e-17 92.8 82 63.4
THA.LOC104826220 Tarenaya hassleriana HOM05D008879 ORTHO05D010552 1.3e-17 92.8 82 63.4
THA.LOC104815845 Tarenaya hassleriana HOM05D008879 ORTHO05D010552 2.2e-17 92.0 82 58.5
Aa31LG5G5820 Aethionema arabicum HOM05D008879 ORTHO05D010552 6.5e-17 90.5 62 69.4
Ciclev10018336m.g Citrus clementina HOM05D008879 ORTHO05D010552 2.6e-10 68.6 77 51.9
Haze_13339 Corylus avellana HOM05D008879 ORTHO05D010552 1.3e-09 66.2 83 51.8
Cfa014710 Carpinus fangiana HOM05D008879 ORTHO05D010552 1.1e-08 63.2 83 50.6
Potri.019G090800 Populus trichocarpa HOM05D008879 ORTHO05D010552 1.4e-08 62.8 74 47.3
Lsat_1_v5_gn_7_23461 Lactuca sativa HOM05D012232 ORTHO05D010552 7.1e-08 60.5 76 42.1
Potri.001G376200 Populus trichocarpa HOM05D008879 ORTHO05D010552 7.1e-08 60.5 82 43.9
Sabra19G0104400 Salix brachista HOM05D008879 ORTHO05D010552 1.6e-07 59.3 73 45.2
TAR624G1413 Trochodendron aralioides HOM05D000001 ORTHO05D000003 7.9e-07 57.0 82 41.5
CSS0029563 Camellia sinensis var. sinensis HOM05D012232 ORTHO05D010552 3.0e-06 55.1 54 55.6
CSS0045732 Camellia sinensis var. sinensis HOM05D012232 ORTHO05D010552 3.0e-06 55.1 54 55.6
COL.COLO4_17611 Corchorus olitorius HOM05D017499 ORTHO05D010552 3.0e-06 55.1 59 49.2
Manes.12G091100 Manihot esculenta HOM05D019843 ORTHO05D048714 6.7e-06 53.9 75 38.7
TWI14G0991 Tripterygium wilfordii HOM05D008879 ORTHO05D010552 6.7e-06 53.9 77 45.5
Prupe.4G170800 Prunus persica HOM05D010237 ORTHO05D012351 8.7e-06 53.5 75 45.3


User provided reference genes

Program Settings