Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL426U10010 Arabidopsis lyrata HOM05D011249 ORTHO05D013690 8.1e-39 163.3 85 100.0
AL4G26250 Arabidopsis lyrata HOM05D011249 ORTHO05D013690 8.1e-39 163.3 85 100.0
AT2G31082 Arabidopsis thaliana HOM05D011249 ORTHO05D013690 6.4e-36 153.7 84 94.0
Carub.0004s1232 Capsella rubella HOM05D011249 ORTHO05D013690 6.4e-36 153.7 85 92.9
CARHR124650 Cardamine hirsuta HOM05D011249 ORTHO05D013690 1.1e-30 136.3 85 82.4
Sp4g13560 Schrenkiella parvula HOM05D011249 ORTHO05D013690 1.0e-25 119.8 85 77.6
BcaB01g04066 Brassica carinata HOM05D011249 ORTHO05D013690 1.8e-25 119.0 85 76.5
BcaB06g28483 Brassica carinata HOM05D011249 ORTHO05D013690 5.1e-25 117.5 85 74.1
BcaB06g28486 Brassica carinata HOM05D011249 ORTHO05D013690 5.1e-25 117.5 85 74.1
C04p60310 Brassica napus HOM05D011249 ORTHO05D013690 5.1e-25 117.5 85 74.1
BolC4t27532H Brassica oleracea HOM05D011249 ORTHO05D013690 5.1e-25 117.5 85 74.1
Thhalv10017928m.g Eutrema salsugineum HOM05D011249 ORTHO05D013690 5.1e-25 117.5 85 75.3
BcaB06g28410 Brassica carinata HOM05D011249 ORTHO05D013690 8.7e-25 116.7 85 72.9
A04p23830 Brassica napus HOM05D011249 ORTHO05D013690 4.3e-24 114.4 84 70.2
BraA04t17907Z Brassica rapa HOM05D011249 ORTHO05D013690 4.3e-24 114.4 85 71.8
Aa31LG5G5830 Aethionema arabicum HOM05D011249 ORTHO05D013690 5.0e-12 74.3 51 74.5
Manes.17G053400 Manihot esculenta HOM05D012232 ORTHO05D013262 4.1e-06 54.7 83 39.8
Manes.16G036050 Manihot esculenta HOM05D012232 ORTHO05D013262 6.9e-06 53.9 81 37.0


User provided reference genes

Program Settings