Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G26240 Arabidopsis lyrata HOM05D009623 ORTHO05D011251 3.0e-38 161.4 82 100.0
Thhalv10017782m.g Eutrema salsugineum HOM05D009623 ORTHO05D011251 5.3e-35 150.6 82 93.9
Sp4g13550 Schrenkiella parvula HOM05D009623 ORTHO05D011251 5.8e-34 147.1 82 89.0
AT2G31081 Arabidopsis thaliana HOM05D009623 ORTHO05D011251 9.9e-34 146.4 82 93.9
A04p23810 Brassica napus HOM05D009623 ORTHO05D011251 2.4e-32 141.7 83 88.0
BraA04t17906Z Brassica rapa HOM05D009623 ORTHO05D011251 5.4e-32 140.6 83 86.7
BcaB06g28408 Brassica carinata HOM05D009623 ORTHO05D011251 1.2e-31 139.4 83 86.7
BcaB06g28482 Brassica carinata HOM05D009623 ORTHO05D011251 1.6e-31 139.0 83 86.7
C04p60300 Brassica napus HOM05D009623 ORTHO05D011251 1.6e-31 139.0 83 86.7
BolC4t27531H Brassica oleracea HOM05D009623 ORTHO05D011251 1.6e-31 139.0 83 86.7
CARHR124630 Cardamine hirsuta HOM05D009623 ORTHO05D011251 3.5e-31 137.9 82 84.1
Carub.0004s1231 Capsella rubella HOM05D009623 ORTHO05D011251 4.0e-27 124.4 82 79.3
AT1G06225 Arabidopsis thaliana HOM05D009623 ORTHO05D011251 1.9e-24 115.5 84 72.6
THA.LOC109116767 Tarenaya hassleriana HOM05D009623 ORTHO05D011251 1.9e-24 115.5 82 69.5
Aa31LG5G5840 Aethionema arabicum HOM05D009623 ORTHO05D011251 9.3e-24 113.2 84 75.0
AL1G16210 Arabidopsis lyrata HOM05D009623 ORTHO05D011251 1.6e-23 112.5 84 70.2
CARHR005760 Cardamine hirsuta HOM05D009623 ORTHO05D011251 2.1e-23 112.1 84 71.4
Carub.0001s0558 Capsella rubella HOM05D009623 ORTHO05D011251 3.9e-22 107.8 82 68.3
BcaB02g06813 Brassica carinata HOM05D009623 ORTHO05D011251 1.6e-20 102.4 84 65.5
BraA10t42755Z Brassica rapa HOM05D009623 ORTHO05D011251 3.7e-20 101.3 84 65.5
A10p04840 Brassica napus HOM05D009623 ORTHO05D011251 8.1e-20 100.1 84 64.3
THA.LOC104800858 Tarenaya hassleriana HOM05D009623 ORTHO05D011251 9.0e-19 96.7 82 62.2
BolC5t29225H Brassica oleracea HOM05D009623 ORTHO05D011251 2.6e-18 95.1 84 59.5
BcaC05g24293 Brassica carinata HOM05D009623 ORTHO05D011251 2.9e-17 91.7 84 58.3
C05p04540 Brassica napus HOM05D009623 ORTHO05D011251 2.9e-17 91.7 84 58.3
Ciclev10017647m.g Citrus clementina HOM05D009623 ORTHO05D011251 3.4e-10 68.2 84 47.6
Potri.013G119100 Populus trichocarpa HOM05D017147 ORTHO05D011251 5.0e-09 64.3 82 41.5
Cpa.g.sc209.26 Carica papaya HOM05D009623 ORTHO05D011251 6.5e-09 63.9 89 49.4
Cfa014706 Carpinus fangiana HOM05D017147 ORTHO05D011251 2.1e-07 58.9 83 43.4
Potri.019G091100 Populus trichocarpa HOM05D017147 ORTHO05D011251 1.0e-06 56.6 82 40.2
TAR629G1463 Trochodendron aralioides HOM05D010626 ORTHO05D012901 1.0e-06 56.6 82 42.7
Atru.chr10.1724 Acer truncatum HOM05D010626 ORTHO05D012901 2.3e-06 55.5 84 42.9
Haze_09355 Corylus avellana HOM05D009672 ORTHO05D011357 3.9e-06 54.7 82 39.0
TAR629G3489 Trochodendron aralioides HOM05D010626 ORTHO05D012901 5.1e-06 54.3 82 41.5
Prupe.3G124600 Prunus persica HOM05D017147 ORTHO05D011251 8.7e-06 53.5 83 39.8
Prupe.4G170900 Prunus persica HOM05D009672 ORTHO05D011357 8.7e-06 53.5 82 46.3


User provided reference genes

Program Settings