Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G25990 Arabidopsis lyrata HOM05D012320 ORTHO05D014318 1.6e-120 436.4 267 100.0
AT2G30960 Arabidopsis thaliana HOM05D012320 ORTHO05D014318 2.1e-64 250.0 278 71.2
Carub.0004s1218 Capsella rubella HOM05D012320 ORTHO05D014318 1.3e-53 214.2 277 65.7
Thhalv10017128m.g Eutrema salsugineum HOM05D012320 ORTHO05D014318 7.4e-38 161.8 268 52.2
CARHR124480 Cardamine hirsuta HOM05D012320 ORTHO05D014318 4.5e-35 152.5 308 43.5
BraA05t20397Z Brassica rapa HOM05D012320 ORTHO05D014318 1.4e-23 114.4 202 45.5
BcaC02g11182 Brassica carinata HOM05D012320 ORTHO05D014318 1.6e-19 100.9 225 44.9
C04p19530 Brassica napus HOM05D012320 ORTHO05D014318 1.6e-19 100.9 225 44.9
BolC4t23485H Brassica oleracea HOM05D012320 ORTHO05D014318 1.6e-19 100.9 225 44.9
Sp4g13450 Schrenkiella parvula HOM05D012320 ORTHO05D014318 1.0e-18 98.2 282 44.0
Aa31LG5G5940 Aethionema arabicum HOM05D012320 ORTHO05D014318 4.2e-17 92.8 309 34.0
A05p14680 Brassica napus HOM05D012320 ORTHO05D014318 4.2e-17 92.8 225 45.3
BcaB02g10355 Brassica carinata HOM05D012320 ORTHO05D014318 8.0e-16 88.6 270 42.2
C05p04680 Brassica napus HOM05D011279 ORTHO05D013458 3.8e-10 69.7 252 32.1
BolC5t29240H Brassica oleracea HOM05D011279 ORTHO05D013458 3.8e-10 69.7 252 32.1
BcaC05g24272 Brassica carinata HOM05D011279 ORTHO05D013458 9.4e-09 65.1 258 32.2
A10p05090 Brassica napus HOM05D011279 ORTHO05D013458 1.2e-08 64.7 252 32.5
BcaB02g06794 Brassica carinata HOM05D011279 ORTHO05D013458 1.8e-07 60.8 249 32.5
Sp1g05180 Schrenkiella parvula HOM05D011279 ORTHO05D013458 8.8e-07 58.5 215 28.4
CARHR006030 Cardamine hirsuta HOM05D011279 ORTHO05D013458 1.2e-06 58.2 36 72.2


User provided reference genes

Program Settings