Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G25390 Arabidopsis lyrata HOM05D008517 ORTHO05D010482 2.4e-168 595.5 317 100.0
AT2G30505 Arabidopsis thaliana HOM05D008517 ORTHO05D010482 7.2e-157 557.4 322 93.5
Carub.0004s1167 Capsella rubella HOM05D008517 ORTHO05D010482 9.1e-144 513.8 322 86.0
Sp4g13060 Schrenkiella parvula HOM05D008517 ORTHO05D010482 1.8e-128 463.0 325 78.2
CARHR123960 Cardamine hirsuta HOM05D008517 ORTHO05D010482 4.6e-127 458.4 317 77.0
Thhalv10016822m.g Eutrema salsugineum HOM05D008517 ORTHO05D010482 8.6e-126 454.1 322 78.3
BraA04t17851Z Brassica rapa HOM05D008517 ORTHO05D010482 8.3e-121 437.6 322 75.2
BcaC02g08016 Brassica carinata HOM05D008517 ORTHO05D010482 1.2e-119 433.7 323 74.3
C04p59390 Brassica napus HOM05D008517 ORTHO05D010482 1.2e-119 433.7 323 74.3
BolC4t27447H Brassica oleracea HOM05D008517 ORTHO05D010482 1.2e-119 433.7 323 74.3
A04p23240 Brassica napus HOM05D008517 ORTHO05D010482 2.7e-119 432.6 323 74.6
BcaB06g28372 Brassica carinata HOM05D008517 ORTHO05D010482 3.4e-114 415.6 324 73.5
A05p14960 Brassica napus HOM05D008517 ORTHO05D010482 1.9e-112 409.8 318 73.9
BraA05t20422Z Brassica rapa HOM05D008517 ORTHO05D010482 1.9e-112 409.8 318 73.9
BcaB02g10328 Brassica carinata HOM05D008517 ORTHO05D010482 2.4e-112 409.5 318 72.3
BolC4t23540H Brassica oleracea HOM05D008517 ORTHO05D010482 3.5e-111 405.6 318 73.0
BcaC02g11142 Brassica carinata HOM05D008517 ORTHO05D010482 2.3e-110 402.9 318 72.6
C04p20010 Brassica napus HOM05D008517 ORTHO05D010482 2.3e-110 402.9 318 72.6
Aa31LG5G6260 Aethionema arabicum HOM05D008517 ORTHO05D010482 4.0e-83 312.4 337 57.0
THA.LOC104800796 Tarenaya hassleriana HOM05D008517 ORTHO05D010482 1.6e-47 194.1 213 48.8
Cpa.g.sc2.275 Carica papaya HOM05D008517 ORTHO05D010482 5.3e-43 179.1 192 48.4
Eucgr.J01845 Eucalyptus grandis HOM05D008517 ORTHO05D010482 2.3e-22 110.5 202 34.7
Lj6g0010191 Lotus japonicus HOM05D008517 ORTHO05D010482 2.6e-21 107.1 251 32.3
Manes.02G211300 Manihot esculenta HOM05D008517 ORTHO05D010482 6.3e-20 102.4 159 35.8
Medtr3g062470 Medicago truncatula HOM05D008517 ORTHO05D010482 4.1e-19 99.8 191 33.0
Rhsim13G0058200 Rhododendron simsii HOM05D008517 ORTHO05D010482 4.1e-19 99.8 187 31.0
TAR633G1539 Trochodendron aralioides HOM05D000050 ORTHO05D010482 7.0e-19 99.0 190 33.2
Psat5g147520 Pisum sativum HOM05D008517 ORTHO05D010482 9.2e-19 98.6 190 32.6
CSS0018299 Camellia sinensis var. sinensis HOM05D008517 ORTHO05D010482 2.7e-18 97.1 250 29.6
Atru.chr10.2344 Acer truncatum HOM05D008517 ORTHO05D010482 3.5e-18 96.7 204 29.9
Actinidia23156 Actinidia chinensis HOM05D000033 ORTHO05D000913 4.5e-18 96.3 192 29.7
TPR.G13887 Trifolium pratense HOM05D008517 ORTHO05D010482 1.0e-17 95.1 191 30.9
PGR119G1844 Punica granatum HOM05D008517 ORTHO05D010482 1.3e-17 94.7 191 37.2
Dinv12288 Davidia involucrata HOM05D008517 ORTHO05D010482 1.7e-17 94.4 208 31.2
arahy.Tifrunner.gnm1.ann1.92WL97 Arachis hypogaea HOM05D008517 ORTHO05D010482 2.9e-17 93.6 189 29.1
Lalb_Chr15g0085691 Lupinus albus HOM05D008517 ORTHO05D010482 6.6e-17 92.4 247 29.1
arahy.Tifrunner.gnm1.ann1.Q24W9G Arachis hypogaea HOM05D008517 ORTHO05D010482 1.9e-16 90.9 225 27.1
Lj2A1104T76 Lonicera japonica HOM05D008517 ORTHO05D010482 5.6e-16 89.4 224 30.4
Glyma.18G051200 Glycine max HOM05D008517 ORTHO05D010482 1.2e-15 88.2 165 35.8
Lalb_Chr18g0054121 Lupinus albus HOM05D008517 ORTHO05D010482 1.2e-15 88.2 209 29.7
Phvul.006G080100 Phaseolus vulgaris HOM05D008517 ORTHO05D010482 3.6e-15 86.7 191 33.0
VMungo0540G2173 Vigna mungo HOM05D008517 ORTHO05D010482 1.8e-14 84.3 190 31.6
ClCG03G000030 Citrullus lanatus HOM05D008517 ORTHO05D010482 1.2e-13 81.6 228 25.0
MELO3C020481.2 Cucumis melo HOM05D008517 ORTHO05D010482 3.4e-13 80.1 189 26.5
Glyma.11G199600 Glycine max HOM05D008517 ORTHO05D010482 2.2e-12 77.4 253 28.9
MD11G1051900 Malus domestica HOM05D016692 ORTHO05D010482 8.3e-12 75.5 240 26.2
FAN21G3878 Fragaria x ananassa HOM05D016692 ORTHO05D010482 2.0e-10 70.9 251 27.1
MSTRG.12716 Avicennia marina HOM05D008517 ORTHO05D010482 3.5e-10 70.1 203 26.6
Sed0007690 Sechium edule HOM05D008517 ORTHO05D010482 4.6e-10 69.7 192 29.2
FvH4_3g40830 Fragaria vesca HOM05D016692 ORTHO05D010482 1.7e-09 67.8 251 26.7
FAN11G0742 Fragaria x ananassa HOM05D016692 ORTHO05D010482 6.6e-09 65.9 251 26.7
FAN25G0531 Fragaria x ananassa HOM05D000033 ORTHO05D000913 6.6e-09 65.9 304 25.7
Aa31LG1G27670 Aethionema arabicum HOM05D005178 ORTHO05D006123 4.7e-07 59.7 196 30.1
Manes.05G026400 Manihot esculenta HOM05D005178 ORTHO05D006123 4.7e-07 59.7 192 26.0
Nn5g26812 Nelumbo nucifera HOM05D008517 ORTHO05D010482 2.3e-06 57.4 154 29.2
Sabra14G0069000 Salix brachista HOM05D005178 ORTHO05D006123 2.3e-06 57.4 159 24.5
CANSAT54G1933 Cannabis sativa HOM05D008517 ORTHO05D010482 3.1e-06 57.0 245 24.1
Lsat_1_v5_gn_8_99661 Lactuca sativa HOM05D008517 ORTHO05D010482 3.1e-06 57.0 161 30.4
Nn1g01788 Nelumbo nucifera HOM05D005178 ORTHO05D006123 4.0e-06 56.6 189 23.3
Potri.014G094400 Populus trichocarpa HOM05D005178 ORTHO05D006123 6.8e-06 55.8 152 23.7
Oeu008679.1 Olea europaea HOM05D005178 ORTHO05D006123 8.9e-06 55.5 154 24.0


User provided reference genes

Program Settings