Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G24950 Arabidopsis lyrata HOM05D000060 ORTHO05D079917 2.7e-25 118.6 99 100.0
Carub.0004s1128 Capsella rubella HOM05D000060 ORTHO05D000082 1.3e-24 116.3 99 89.9
Thhalv10017267m.g Eutrema salsugineum HOM05D000060 ORTHO05D000082 6.6e-24 114.0 99 87.9
CARHR123450 Cardamine hirsuta HOM05D000060 ORTHO05D000082 2.1e-22 109.0 99 85.9
Sp4g12720 Schrenkiella parvula HOM05D000060 ORTHO05D000082 3.1e-21 105.1 99 83.8
BcaB06g28344 Brassica carinata HOM05D000060 ORTHO05D000082 6.8e-21 104.0 99 80.8
BcaC02g08050 Brassica carinata HOM05D000060 ORTHO05D000082 6.8e-21 104.0 99 80.8
C04p59010 Brassica napus HOM05D000060 ORTHO05D000082 6.8e-21 104.0 99 80.8
BolC4t27413H Brassica oleracea HOM05D000060 ORTHO05D000082 6.8e-21 104.0 99 80.8
BcaB02g10301 Brassica carinata HOM05D000060 ORTHO05D000082 1.5e-20 102.8 99 68.7
A04p22860 Brassica napus HOM05D000060 ORTHO05D000082 1.3e-19 99.8 99 72.7
BraA04t17823Z Brassica rapa HOM05D000060 ORTHO05D000082 1.3e-19 99.8 99 72.7
A05p15290 Brassica napus HOM05D000060 ORTHO05D000082 3.7e-19 98.2 99 60.6
BraA05t20448Z Brassica rapa HOM05D000060 ORTHO05D000082 3.7e-19 98.2 99 60.6
BcaC02g11097 Brassica carinata HOM05D000060 ORTHO05D000082 3.2e-18 95.1 99 59.6
BcaB01g04126 Brassica carinata HOM05D000060 ORTHO05D000082 3.5e-17 91.7 99 57.6
BcaC01g06026 Brassica carinata HOM05D000060 ORTHO05D000082 3.5e-17 91.7 99 57.6
BcaB01g04127 Brassica carinata HOM05D000060 ORTHO05D000082 1.3e-16 89.7 99 67.7
C03p19800 Brassica napus HOM05D000060 ORTHO05D000082 1.3e-16 89.7 99 56.6
BolC3t14358H Brassica oleracea HOM05D000060 ORTHO05D000082 1.3e-16 89.7 99 56.6
A03p16820 Brassica napus HOM05D000060 ORTHO05D000082 2.3e-16 89.0 99 56.6
BraA03t10970Z Brassica rapa HOM05D000060 ORTHO05D000082 2.3e-16 89.0 99 56.6
AT2G30130 Arabidopsis thaliana HOM05D000060 ORTHO05D000082 4.3e-15 84.7 99 83.8
Aa31LG5G6540 Aethionema arabicum HOM05D000060 ORTHO05D000082 1.4e-13 79.7 99 72.7
C04p20480 Brassica napus HOM05D000060 ORTHO05D000082 1.4e-10 69.7 41 85.4
BolC4t23573H Brassica oleracea HOM05D000060 ORTHO05D000082 1.4e-10 69.7 41 85.4
THA.LOC104800775 Tarenaya hassleriana HOM05D000060 ORTHO05D000082 1.4e-10 69.7 99 51.5
THA.LOC104815813 Tarenaya hassleriana HOM05D000060 ORTHO05D000082 3.0e-08 62.0 99 63.6
Potri.001G281600 Populus trichocarpa HOM05D000060 ORTHO05D000082 1.6e-06 56.2 104 44.2
Aqoxy1G01305 Aquilegia oxysepala HOM05D000060 ORTHO05D000082 4.7e-06 54.7 99 42.4
Nn2g13238 Nelumbo nucifera HOM05D000060 ORTHO05D000082 4.7e-06 54.7 99 41.4
CiPaw.13G071200 Carya illinoinensis HOM05D000060 ORTHO05D000082 8.1e-06 53.9 99 40.4
RcHm_v2.0_Chr5g0071311 Rosa chinensis HOM05D000060 ORTHO05D000082 8.1e-06 53.9 107 41.1


User provided reference genes

Program Settings