Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G24870 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 3.9e-290 1000.7 507 100.0
AT2G30100 Arabidopsis thaliana HOM05D006841 ORTHO05D008607 4.1e-271 937.6 508 95.1
CARHR123400 Cardamine hirsuta HOM05D006841 ORTHO05D008607 6.6e-253 877.1 512 88.3
Carub.0004s1120 Capsella rubella HOM05D006841 ORTHO05D008607 8.6e-253 876.7 513 89.5
Thhalv10016546m.g Eutrema salsugineum HOM05D006841 ORTHO05D008607 4.0e-250 867.8 511 88.3
Sp4g12660 Schrenkiella parvula HOM05D006841 ORTHO05D008607 4.6e-246 854.4 511 86.9
Aa31LG5G6580 Aethionema arabicum HOM05D006841 ORTHO05D008607 4.7e-235 817.8 516 82.4
C04p58980 Brassica napus HOM05D006841 ORTHO05D008607 7.5e-233 810.4 512 81.8
BolC4t27410H Brassica oleracea HOM05D006841 ORTHO05D008607 7.5e-233 810.4 513 81.9
BraA04t17817Z Brassica rapa HOM05D006841 ORTHO05D008607 8.6e-229 797.0 516 80.0
A04p22780 Brassica napus HOM05D006841 ORTHO05D008607 5.6e-228 794.3 514 80.0
AL59U10050 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 3.4e-225 785.0 446 91.3
BcaC02g08056 Brassica carinata HOM05D006841 ORTHO05D008607 1.3e-221 773.1 510 78.6
THA.LOC104800754 Tarenaya hassleriana HOM05D006841 ORTHO05D008607 3.8e-216 755.0 514 77.4
Thecc.09G353800 Theobroma cacao HOM05D006841 ORTHO05D008607 2.5e-175 619.4 516 62.0
COL.COLO4_11072 Corchorus olitorius HOM05D006841 ORTHO05D008607 1.6e-174 616.7 448 67.9
Atru.chr3.4145 Acer truncatum HOM05D006841 ORTHO05D008607 6.1e-174 614.8 514 61.7
CiPaw.14G056400 Carya illinoinensis HOM05D006841 ORTHO05D008607 1.0e-173 614.0 506 62.8
Duzib170G1072 Durio zibethinus HOM05D006841 ORTHO05D008607 1.8e-173 613.2 450 67.1
Prupe.6G052600 Prunus persica HOM05D006841 ORTHO05D008607 1.8e-173 613.2 512 63.1
QL01p039597 Quercus lobata HOM05D006841 ORTHO05D008607 8.8e-173 610.9 515 61.6
Ciclev10028251m.g Citrus clementina HOM05D006841 ORTHO05D008607 9.7e-172 607.4 492 64.2
Potri.009G075200 Populus trichocarpa HOM05D006841 ORTHO05D008607 2.8e-171 605.9 515 61.2
Duzib168G0722 Durio zibethinus HOM05D006841 ORTHO05D008607 6.3e-171 604.7 515 60.6
CANSAT54G0320 Cannabis sativa HOM05D006841 ORTHO05D008607 1.4e-170 603.6 497 62.4
Gorai.009G112400 Gossypium raimondii HOM05D006841 ORTHO05D008607 5.3e-170 601.7 512 60.4
RcHm_v2.0_Chr5g0070721 Rosa chinensis HOM05D006841 ORTHO05D008607 7.0e-170 601.3 513 60.8
Phvul.006G071400 Phaseolus vulgaris HOM05D006841 ORTHO05D008607 9.1e-170 600.9 520 60.4
arahy.Tifrunner.gnm1.ann1.1QT3IR Arachis hypogaea HOM05D006841 ORTHO05D008607 7.7e-169 597.8 495 62.0
Gohir.A05G108000 Gossypium hirsutum HOM05D006841 ORTHO05D008607 1.3e-168 597.0 512 60.0
Sabra09G0057100 Salix brachista HOM05D006841 ORTHO05D008607 1.3e-168 597.0 476 64.1
Gohir.D05G108200 Gossypium hirsutum HOM05D006841 ORTHO05D008607 2.2e-168 596.3 512 59.8
arahy.Tifrunner.gnm1.ann1.UR06JS Arachis hypogaea HOM05D006841 ORTHO05D008607 5.0e-168 595.1 494 61.7
MD03G1062600 Malus domestica HOM05D006841 ORTHO05D008607 5.0e-168 595.1 447 66.0
CsaV3_6G016010 Cucumis sativus L. HOM05D006841 ORTHO05D008607 1.5e-167 593.6 503 62.2
CSS0042618 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 3.2e-167 592.4 517 59.0
SalBow2G2391 Salvia bowleyana HOM05D006841 ORTHO05D008607 4.2e-167 592.0 511 60.5
Glyma.18G059800 Glycine max HOM05D006841 ORTHO05D008607 5.5e-167 591.7 470 62.6
FvH4_3g39290 Fragaria vesca HOM05D006841 ORTHO05D008607 7.2e-167 591.3 459 64.3
TWI79G1747 Tripterygium wilfordii HOM05D006841 ORTHO05D008607 7.2e-167 591.3 467 64.2
Eucgr.B02230 Eucalyptus grandis HOM05D006841 ORTHO05D008607 9.4e-167 590.9 450 64.9
FAN11G0941 Fragaria x ananassa HOM05D006841 ORTHO05D008607 9.4e-167 590.9 459 64.1
Glyma.11G167300 Glycine max HOM05D006841 ORTHO05D008607 9.4e-167 590.9 521 59.5
ClCG02G019390 Citrullus lanatus HOM05D006841 ORTHO05D008607 2.1e-166 589.7 473 63.4
CiPaw.13G073200 Carya illinoinensis HOM05D006841 ORTHO05D008607 3.6e-166 589.0 515 61.0
Haze_24381 Corylus avellana HOM05D006841 ORTHO05D008607 3.6e-166 589.0 530 59.1
MELO3C026835.2 Cucumis melo HOM05D006841 ORTHO05D008607 4.7e-166 588.6 503 61.2
FAN25G3694 Fragaria x ananassa HOM05D006841 ORTHO05D008607 6.1e-166 588.2 459 63.8
TAR369G0096 Trochodendron aralioides HOM05D006841 ORTHO05D008607 6.1e-166 588.2 516 60.3
MD11G1066200 Malus domestica HOM05D006841 ORTHO05D008607 1.0e-165 587.4 513 59.8
PGR102G0989 Punica granatum HOM05D006841 ORTHO05D008607 1.0e-165 587.4 467 62.5
Actinidia34467 Actinidia chinensis HOM05D006841 ORTHO05D008607 1.8e-165 586.6 519 58.8
Lalb_Chr18g0051231 Lupinus albus HOM05D006841 ORTHO05D008607 1.8e-165 586.6 449 64.6
Sed0019546 Sechium edule HOM05D006841 ORTHO05D008607 1.8e-165 586.6 507 60.6
Manes.02G217600 Manihot esculenta HOM05D006841 ORTHO05D008607 3.0e-165 585.9 477 62.7
vmacro14612 Vaccinium macrocarpon HOM05D006841 ORTHO05D008607 3.9e-165 585.5 490 60.2
MSTRG.12683 Avicennia marina HOM05D006841 ORTHO05D008607 5.2e-165 585.1 452 65.3
FAN21G2904 Fragaria x ananassa HOM05D006841 ORTHO05D008607 6.7e-165 584.7 459 63.6
Lj6g0024894 Lotus japonicus HOM05D006841 ORTHO05D008607 1.5e-164 583.6 449 64.8
Psat5g157440 Pisum sativum HOM05D006841 ORTHO05D008607 5.7e-164 581.6 511 59.1
HanXRQChr01g0011601 Helianthus annuus HOM05D006841 ORTHO05D008607 9.7e-164 580.9 515 57.9
TPR.G32925 Trifolium pratense HOM05D006841 ORTHO05D008607 1.3e-163 580.5 518 58.3
Dinv28672 Davidia involucrata HOM05D006841 ORTHO05D008607 1.7e-163 580.1 504 60.5
Rhsim01G0239400 Rhododendron simsii HOM05D006841 ORTHO05D008607 1.1e-162 577.4 518 58.5
TAR636G1839 Trochodendron aralioides HOM05D006841 ORTHO05D008607 2.4e-162 576.2 486 60.7
CAN.G707.10 Capsicum annuum HOM05D006841 ORTHO05D008607 9.1e-162 574.3 507 57.6
Sc06g0008150 Simmondsia chinensis HOM05D006841 ORTHO05D008607 1.6e-161 573.5 513 60.4
Oeu018490.1 Olea europaea HOM05D006841 ORTHO05D008607 7.7e-161 571.2 450 62.9
Sopen05g006930 Solanum pennellii HOM05D006841 ORTHO05D008607 1.3e-160 570.5 450 62.9
EL10Ac7g15887 Beta vulgaris HOM05D006841 ORTHO05D008607 1.7e-160 570.1 450 63.6
Peaxi162Scf01324g00238 Petunia axillaris HOM05D006841 ORTHO05D008607 1.7e-160 570.1 463 61.8
Solyc05g012140.3 Solanum lycopersicum HOM05D006841 ORTHO05D008607 2.2e-160 569.7 450 62.9
Medtr3g465390 Medicago truncatula HOM05D006841 ORTHO05D008607 5.0e-160 568.5 517 56.3
PGSC0003DMG401028313 Solanum tuberosum HOM05D006841 ORTHO05D008607 5.5e-159 565.1 450 62.7
Aqoxy1G01268 Aquilegia oxysepala HOM05D006841 ORTHO05D008607 7.2e-159 564.7 451 63.0
AUR62009700 Chenopodium quinoa HOM05D006841 ORTHO05D008607 7.2e-159 564.7 450 62.9
Migut.N00773 Erythranthe guttata HOM05D006841 ORTHO05D008607 3.6e-158 562.4 490 59.6
AUR62036246 Chenopodium quinoa HOM05D006841 ORTHO05D008607 6.1e-158 561.6 450 62.7
CSS0014141 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 3.0e-157 559.3 517 56.1
Hund05042 Selenicereus undatus HOM05D006841 ORTHO05D008607 1.2e-156 557.4 450 61.8
Ah.15g096690 Amaranthus hybridus HOM05D006841 ORTHO05D008607 3.4e-156 555.8 447 61.5
Ah.08g215320 Amaranthus hybridus HOM05D006841 ORTHO05D008607 1.7e-155 553.5 449 60.4
VMungo0540G0160 Vigna mungo HOM05D006841 ORTHO05D008607 6.3e-155 551.6 434 63.8
Lsat_1_v5_gn_5_173260 Lactuca sativa HOM05D006841 ORTHO05D008607 7.0e-154 548.1 488 57.6
PSO017G2874 Papaver somniferum HOM05D006841 ORTHO05D008607 1.3e-152 543.9 453 61.1
PSO349G0316 Papaver somniferum HOM05D006841 ORTHO05D008607 1.5e-151 540.4 453 61.1
unitig_94.g28363 Utricularia gibba HOM05D006841 ORTHO05D008607 7.2e-151 538.1 509 56.6
SGA_v2.0_scaffold104G30129 Striga asiatica HOM05D006841 ORTHO05D008607 1.2e-150 537.3 450 61.8
MBI15_g21765_MAGBIO Magnolia biondii HOM05D006841 ORTHO05D008607 8.0e-150 534.6 501 55.3
Lj2A1088G41 Lonicera japonica HOM05D006841 ORTHO05D008607 2.0e-148 530.0 432 62.5
CDE06G2104 Ceratophyllum demersum HOM05D006841 ORTHO05D008607 9.8e-148 527.7 511 55.4
Ca_14982_v3 Cicer arietinum L. HOM05D006841 ORTHO05D008607 9.1e-146 521.2 421 61.5
ECA248G2088 Erigeron canadensis HOM05D006841 ORTHO05D008607 1.2e-142 510.8 422 59.2
Cc01_g14600 Coffea canephora HOM05D006841 ORTHO05D008607 3.3e-127 459.5 403 56.1
Os05g0353300 Oryza sativa ssp. japonica HOM05D006841 ORTHO05D008607 3.1e-125 453.0 461 51.8
ATR0174G035 Amborella trichopoda HOM05D006841 ORTHO05D008607 7.5e-124 448.4 423 53.2
Zm00001eb286480 Zea mays HOM05D006841 ORTHO05D008607 3.7e-123 446.0 422 52.6
DCAR_007349 Daucus carota HOM05D006841 ORTHO05D008607 1.2e-121 441.0 359 59.6
GSVIVG01024686001 Vitis vinifera HOM05D006841 ORTHO05D008607 2.7e-121 439.9 386 58.0
HPP92_025104 Vanilla planifolia HOM05D006841 ORTHO05D008607 2.3e-104 383.6 338 57.1
SEGI_38470 Sequoiadendron giganteum HOM05D006841 ORTHO05D008607 3.3e-103 379.8 430 44.7
Actinidia23875 Actinidia chinensis HOM05D006841 ORTHO05D008607 1.0e-96 358.2 303 61.4
Hma1.2p1_0146F.1_g065520 Hydrangea macrophylla HOM05D006841 ORTHO05D008607 1.9e-87 327.4 259 59.1
Mapoly0068s0098 Marchantia polymorpha HOM05D006841 ORTHO05D008607 1.3e-86 324.7 443 39.7
CSS0012316 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 3.9e-72 276.6 428 40.7
Nn2g10947 Nelumbo nucifera HOM05D006841 ORTHO05D008607 3.8e-67 260.0 226 61.9
SMO304G0125 Selaginella moellendorffii HOM05D006841 ORTHO05D008607 3.3e-63 246.9 422 34.1
Nn2g13216 Nelumbo nucifera HOM05D006841 ORTHO05D008607 4.1e-61 240.0 210 63.3
Pp3c12_8330 Physcomitrium patens HOM05D006841 ORTHO05D008607 6.9e-61 239.2 426 33.3
Cpa.g.sc2.394 Carica papaya HOM05D006841 ORTHO05D008607 7.9e-57 225.7 154 73.4
MD11G1194000 Malus domestica HOM05D006841 ORTHO05D008607 7.0e-53 212.6 160 69.4
Oeu034210.1 Olea europaea HOM05D009051 ORTHO05D000140 3.5e-44 183.7 178 50.0
AagrBONN_evm.TU.Sc2ySwM_117.787 Anthoceros agrestis HOM05D006841 ORTHO05D008607 2.7e-33 147.5 225 38.2
Oeu034514.1 Olea europaea HOM05D006841 ORTHO05D008607 1.7e-30 138.3 130 56.9
Oeu034518.1 Olea europaea HOM05D006841 ORTHO05D008607 4.1e-29 133.7 129 56.6
Oeu034517.1 Olea europaea HOM05D006841 ORTHO05D008607 1.2e-28 132.1 230 35.2
Oeu034513.1 Olea europaea HOM05D006841 ORTHO05D008607 7.7e-28 129.4 230 36.1
VMungo0331G0799 Vigna mungo HOM05D000172 ORTHO05D004529 4.1e-21 107.1 96 57.3
Oeu019495.1 Olea europaea HOM05D006841 ORTHO05D008607 6.6e-11 73.2 145 33.8


User provided reference genes

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