Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G22520 Arabidopsis lyrata HOM05D008128 ORTHO05D010259 5.1e-48 194.1 101 100.0
AT2G27775 Arabidopsis thaliana HOM05D008128 ORTHO05D010259 2.5e-42 175.3 101 90.1
Carub.0004s0853 Capsella rubella HOM05D008128 ORTHO05D010259 7.4e-39 163.7 101 87.1
CARHR120480 Cardamine hirsuta HOM05D008128 ORTHO05D010259 2.6e-36 155.2 101 82.2
Aa31LG5G8220 Aethionema arabicum HOM05D008128 ORTHO05D010259 1.1e-29 133.3 105 73.3
Thhalv10017465m.g Eutrema salsugineum HOM05D008128 ORTHO05D010259 1.8e-29 132.5 106 71.7
Sp4g10610 Schrenkiella parvula HOM05D008128 ORTHO05D010259 3.4e-28 128.3 107 72.9
A07p18370 Brassica napus HOM05D008128 ORTHO05D010259 7.7e-28 127.1 102 69.6
BraA07t29553Z Brassica rapa HOM05D008128 ORTHO05D010259 3.8e-27 124.8 102 68.6
BolC4t23880H Brassica oleracea HOM05D008128 ORTHO05D010259 7.2e-26 120.6 103 68.9
Carub.0004s0854 Capsella rubella HOM05D007402 ORTHO05D003673 7.2e-26 120.6 85 78.8
BcaB02g10115 Brassica carinata HOM05D008128 ORTHO05D010259 7.9e-25 117.1 104 66.3
C04p23830 Brassica napus HOM05D008128 ORTHO05D010259 1.0e-24 116.7 103 67.0
BcaC02g10905 Brassica carinata HOM05D008128 ORTHO05D010259 6.7e-24 114.0 103 67.0
THA.LOC104826404 Tarenaya hassleriana HOM05D008128 ORTHO05D010259 8.8e-24 113.6 102 65.7
BcaB06g28169 Brassica carinata HOM05D008128 ORTHO05D010259 1.7e-22 109.4 103 69.9
C04p56930 Brassica napus HOM05D008128 ORTHO05D010259 2.8e-22 108.6 103 68.0
A04p21130 Brassica napus HOM05D008128 ORTHO05D010259 3.8e-19 98.2 102 59.8
BcaC02g08229 Brassica carinata HOM05D008128 ORTHO05D010259 5.0e-19 97.8 103 62.1
Aa31LG5G8210 Aethionema arabicum HOM05D005584 ORTHO05D006809 5.5e-18 94.4 99 59.6
BolC4t27230H Brassica oleracea HOM05D008128 ORTHO05D010259 1.0e-16 90.1 93 65.6
Gorai.009G088100 Gossypium raimondii HOM05D008128 ORTHO05D010259 2.8e-14 82.0 101 55.4
Gohir.D05G086500 Gossypium hirsutum HOM05D008128 ORTHO05D010259 8.2e-14 80.5 101 54.5
Manes.04G008100 Manihot esculenta HOM05D008128 ORTHO05D010259 8.2e-14 80.5 106 52.8
TWI31G0843 Tripterygium wilfordii HOM05D008128 ORTHO05D010259 8.2e-14 80.5 106 49.1
BraA04t17682Z Brassica rapa HOM05D008128 ORTHO05D010259 1.1e-13 80.1 92 56.5
Duzib170G0339 Durio zibethinus HOM05D008128 ORTHO05D010259 2.4e-13 79.0 104 53.8
Gohir.A05G083600 Gossypium hirsutum HOM05D008128 ORTHO05D010259 2.4e-13 79.0 101 53.5
Thecc.09G290900 Theobroma cacao HOM05D008128 ORTHO05D010259 4.1e-13 78.2 102 54.9
Duzib168G2012 Durio zibethinus HOM05D008128 ORTHO05D010259 9.1e-13 77.0 101 56.4
Manes.11G157800 Manihot esculenta HOM05D008128 ORTHO05D010259 2.0e-12 75.9 109 52.3
CANSAT54G0355 Cannabis sativa HOM05D008128 ORTHO05D010259 2.6e-12 75.5 102 51.0
MD11G1158100 Malus domestica HOM05D008128 ORTHO05D010259 5.9e-12 74.3 99 50.5
Prupe.6G119900 Prunus persica HOM05D008128 ORTHO05D010259 7.7e-12 73.9 96 51.0
Gohir.A07G107600 Gossypium hirsutum HOM05D008128 ORTHO05D010259 2.9e-11 72.0 100 52.0
MD03G1135500 Malus domestica HOM05D008128 ORTHO05D010259 2.9e-11 72.0 99 48.5
GSVIVG01031392001 Vitis vinifera HOM05D008128 ORTHO05D010259 1.5e-10 69.7 107 48.6
PSO170G0300 Papaver somniferum HOM05D008128 ORTHO05D010259 1.9e-10 69.3 105 49.5
Dinv29430 Davidia involucrata HOM05D008128 ORTHO05D010259 2.5e-10 68.9 100 47.0
CiPaw.05G064900 Carya illinoinensis HOM05D008128 ORTHO05D010259 4.2e-10 68.2 104 47.1
Nn6g35034 Nelumbo nucifera HOM05D008128 ORTHO05D010259 7.2e-10 67.4 98 49.0
Potri.009G148400 Populus trichocarpa HOM05D008128 ORTHO05D010259 9.4e-10 67.0 109 49.5
CiPaw.13G140600 Carya illinoinensis HOM05D008128 ORTHO05D010259 2.1e-09 65.9 101 47.5
THA.LOC104800555 Tarenaya hassleriana HOM05D007402 ORTHO05D003673 2.1e-09 65.9 88 46.6
PSO443G0067 Papaver somniferum HOM05D008128 ORTHO05D010259 4.7e-09 64.7 107 46.7
CiPaw.14G103200 Carya illinoinensis HOM05D008128 ORTHO05D010259 8.0e-09 63.9 67 55.2
PSO384G2376 Papaver somniferum HOM05D008128 ORTHO05D010259 8.0e-09 63.9 107 47.7
Cfa010077 Carpinus fangiana HOM05D008128 ORTHO05D010259 1.4e-08 63.2 87 46.0
PSO210G6229 Papaver somniferum HOM05D008128 ORTHO05D010259 1.4e-08 63.2 105 48.6
Dinv21251 Davidia involucrata HOM05D008128 ORTHO05D010259 3.0e-08 62.0 100 44.0
FAN25G2677 Fragaria x ananassa HOM05D008128 ORTHO05D010259 3.0e-08 62.0 97 45.4
Gorai.001G119900 Gossypium raimondii HOM05D008128 ORTHO05D010259 3.0e-08 62.0 63 60.3
FAN25G1097 Fragaria x ananassa HOM05D008128 ORTHO05D010259 4.0e-08 61.6 97 45.4
RcHm_v2.0_Chr5g0043301 Rosa chinensis HOM05D008128 ORTHO05D010259 4.0e-08 61.6 103 46.6
FvH4_3g24190 Fragaria vesca HOM05D008128 ORTHO05D010259 6.7e-08 60.8 97 45.4
Actinidia08433 Actinidia chinensis HOM05D008128 ORTHO05D010259 2.0e-07 59.3 105 45.7
AL4G22480 Arabidopsis lyrata HOM05D007402 ORTHO05D003673 2.6e-07 58.9 72 52.8
AT2G27800 Arabidopsis thaliana HOM05D007402 ORTHO05D003673 5.7e-07 57.8 95 42.1


User provided reference genes

Program Settings