Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G20870 Arabidopsis lyrata HOM05D001338 ORTHO05D001239 2.6e-131 472.2 270 100.0
Sp4g09900 Schrenkiella parvula HOM05D001338 ORTHO05D001239 1.3e-58 230.7 159 65.4
Thhalv10009558m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 5.2e-47 192.2 154 60.4
Thhalv10009736m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 1.3e-45 187.6 261 49.4
AT4G10200 Arabidopsis thaliana HOM05D001338 ORTHO05D001239 2.1e-40 170.2 143 53.1
TWI31G1167 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 8.0e-40 168.3 136 56.6
TWI31G0800 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 5.2e-39 165.6 136 55.9
TWI74G0957 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 5.2e-39 165.6 136 55.9
TWI18G0851 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 2.0e-38 163.7 136 55.1
Thhalv10017956m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 3.4e-38 162.9 270 36.7
PSO063G4296 Papaver somniferum HOM05D001338 ORTHO05D001239 3.4e-38 162.9 274 44.5
CSS0006650 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 4.4e-38 162.5 136 55.1
CSS0027088 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 4.4e-38 162.5 136 55.1
CSS0047876 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 1.3e-37 161.0 136 54.4
PSO478G0891 Papaver somniferum HOM05D001338 ORTHO05D001239 1.7e-37 160.6 143 53.8
PSO761G0174 Papaver somniferum HOM05D001338 ORTHO05D001239 1.7e-37 160.6 143 53.8
CARHR103200 Cardamine hirsuta HOM05D001338 ORTHO05D001239 4.9e-37 159.1 141 50.4
PSO541G2490 Papaver somniferum HOM05D001338 ORTHO05D001239 1.4e-36 157.5 143 53.1
PSO104G0173 Papaver somniferum HOM05D001338 ORTHO05D001239 3.2e-36 156.4 143 53.1
PSO339G3749 Papaver somniferum HOM05D001338 ORTHO05D001239 7.0e-36 155.2 274 36.1
PSO170G1703 Papaver somniferum HOM05D001338 ORTHO05D001239 9.2e-36 154.8 143 52.4
RcHm_v2.0_Chr7g0198811 Rosa chinensis HOM05D001338 ORTHO05D001239 1.2e-35 154.5 267 37.1
PSO063G3812 Papaver somniferum HOM05D001338 ORTHO05D001239 1.0e-34 151.4 137 54.0
Zm00001eb027500 Zea mays HOM05D001338 ORTHO05D001239 1.0e-34 151.4 137 53.3
CSS0005716 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 1.3e-34 151.0 131 54.2
Zm00001eb237490 Zea mays HOM05D001338 ORTHO05D001239 1.7e-34 150.6 154 48.7
PSO170G2214 Papaver somniferum HOM05D001338 ORTHO05D001239 2.3e-34 150.2 136 55.1
PSO478G4662 Papaver somniferum HOM05D001338 ORTHO05D001239 2.3e-34 150.2 136 55.1
Medtr4g010145 Medicago truncatula HOM05D001338 ORTHO05D016692 2.9e-34 149.8 271 43.2
Oeu012605.1 Olea europaea HOM05D001338 ORTHO05D001239 2.9e-34 149.8 267 35.2
PSO063G6584 Papaver somniferum HOM05D001338 ORTHO05D001239 3.9e-34 149.4 136 55.1
PSO478G1760 Papaver somniferum HOM05D001338 ORTHO05D001239 3.9e-34 149.4 136 54.4
CANSAT21G0118 Cannabis sativa HOM05D001338 ORTHO05D001239 5.0e-34 149.1 135 54.8
CANSAT21G2437 Cannabis sativa HOM05D001338 ORTHO05D001239 5.0e-34 149.1 135 54.8
FvH4_1g08761 Fragaria vesca HOM05D001338 ORTHO05D001239 6.6e-34 148.7 268 41.8
FvH4_4g01531 Fragaria vesca HOM05D001338 ORTHO05D001239 6.6e-34 148.7 278 37.4
PSO764G0071 Papaver somniferum HOM05D001338 ORTHO05D001239 8.6e-34 148.3 136 54.4
PSO144G0149 Papaver somniferum HOM05D001338 ORTHO05D001239 1.1e-33 147.9 136 54.4
PSO832G4176 Papaver somniferum HOM05D001338 ORTHO05D001239 1.1e-33 147.9 136 54.4
BolC2t08893H Brassica oleracea HOM05D001338 ORTHO05D001239 1.5e-33 147.5 260 35.0
FvH4_5g30891 Fragaria vesca HOM05D001338 ORTHO05D001239 2.5e-33 146.7 268 41.4
PSO063G4981 Papaver somniferum HOM05D001338 ORTHO05D001239 2.5e-33 146.7 136 54.4
PSO478G0924 Papaver somniferum HOM05D001338 ORTHO05D001239 2.5e-33 146.7 141 50.4
PSO210G0436 Papaver somniferum HOM05D001338 ORTHO05D001239 3.3e-33 146.4 138 50.7
PSO063G7197 Papaver somniferum HOM05D001338 ORTHO05D001239 7.3e-33 145.2 136 52.9
Zm00001eb077850 Zea mays HOM05D001338 ORTHO05D001239 9.5e-33 144.8 268 36.9
CANSAT54G1040 Cannabis sativa HOM05D001338 ORTHO05D001239 1.2e-32 144.4 136 51.5
PSO210G5802 Papaver somniferum HOM05D001338 ORTHO05D001239 1.6e-32 144.1 137 54.0
PSO541G0488 Papaver somniferum HOM05D001338 ORTHO05D001239 1.6e-32 144.1 138 50.0
CANSAT11G1935 Cannabis sativa HOM05D001338 ORTHO05D001239 3.6e-32 142.9 286 36.4
PSO541G5408 Papaver somniferum HOM05D001338 ORTHO05D001239 4.7e-32 142.5 120 55.0
HanXRQChr11g0321041 Helianthus annuus HOM05D001338 ORTHO05D001239 6.2e-32 142.1 136 49.3
PSO478G0790 Papaver somniferum HOM05D001338 ORTHO05D001239 8.0e-32 141.7 136 52.2
PSO210G1522 Papaver somniferum HOM05D001338 ORTHO05D001239 1.0e-31 141.4 262 38.5
Oeu028129.1 Olea europaea HOM05D001338 ORTHO05D001239 1.4e-31 141.0 138 47.8
Oeu008700.1 Olea europaea HOM05D001338 ORTHO05D001239 2.3e-31 140.2 267 35.6
PSO675G8898 Papaver somniferum HOM05D001338 ORTHO05D001239 3.1e-31 139.8 136 49.3
PSO541G1638 Papaver somniferum HOM05D001338 ORTHO05D001239 4.0e-31 139.4 136 47.1
PSO781G0133 Papaver somniferum HOM05D001338 ORTHO05D001239 5.2e-31 139.0 133 53.4
Aqoxy5G02339 Aquilegia oxysepala HOM05D001338 ORTHO05D001239 1.2e-30 137.9 126 53.2
ECA236G1638 Erigeron canadensis HOM05D001338 ORTHO05D001239 1.5e-30 137.5 262 38.2
PSO421G0097 Papaver somniferum HOM05D001338 ORTHO05D001239 1.5e-30 137.5 140 50.0
PSO384G4132 Papaver somniferum HOM05D001338 ORTHO05D001239 2.0e-30 137.1 136 48.5
PSO801G0680 Papaver somniferum HOM05D001338 ORTHO05D001239 3.4e-30 136.3 136 48.5
CANSAT64G1081 Cannabis sativa HOM05D001338 ORTHO05D001239 4.4e-30 136.0 261 42.1
Oeu016868.1 Olea europaea HOM05D001338 ORTHO05D001239 4.4e-30 136.0 138 45.7
AUR62026124 Chenopodium quinoa HOM05D001338 ORTHO05D001239 7.5e-30 135.2 146 49.3
PSO781G0216 Papaver somniferum HOM05D001338 ORTHO05D001239 8.3e-29 131.7 121 52.9
CANSAT35G0728 Cannabis sativa HOM05D001338 ORTHO05D001239 1.4e-28 131.0 139 48.2
FvH4_6g47642 Fragaria vesca HOM05D001338 ORTHO05D001239 1.9e-28 130.6 263 40.7
PSO832G0837 Papaver somniferum HOM05D001338 ORTHO05D001239 1.9e-28 130.6 115 51.3
TWI73G0975 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 3.2e-28 129.8 154 46.8
Glyma.12G093566 Glycine max HOM05D001338 ORTHO05D001239 5.4e-28 129.0 124 52.4
Oeu063768.1 Olea europaea HOM05D001338 ORTHO05D001239 1.2e-27 127.9 149 41.6
Oeu042321.2 Olea europaea HOM05D001338 ORTHO05D001239 1.6e-27 127.5 267 33.7
MD01G1087700 Malus domestica HOM05D001113 ORTHO05D000968 3.5e-27 126.3 126 49.2
Oeu054316.1 Olea europaea HOM05D001338 ORTHO05D001239 3.5e-27 126.3 138 43.5
Oeu029248.1 Olea europaea HOM05D001338 ORTHO05D001239 7.8e-27 125.2 124 50.0
PSO063G1472 Papaver somniferum HOM05D001338 ORTHO05D001239 7.8e-27 125.2 136 44.1
Oeu003234.1 Olea europaea HOM05D001338 ORTHO05D001239 3.0e-26 123.2 252 33.7
Oeu056073.1 Olea europaea HOM05D001338 ORTHO05D001239 3.0e-26 123.2 121 46.3
ECA232G0049 Erigeron canadensis HOM05D001338 ORTHO05D001239 5.0e-26 122.5 269 37.2
PSO017G0847 Papaver somniferum HOM05D001338 ORTHO05D001239 1.1e-25 121.3 261 34.1
FvH4_2g32571 Fragaria vesca HOM05D001338 ORTHO05D001239 9.5e-25 118.2 111 48.6
Gohir.A06G101504 Gossypium hirsutum HOM05D001338 ORTHO05D001239 2.8e-24 116.7 251 32.7
PSO832G0893 Papaver somniferum HOM05D001338 ORTHO05D001239 3.6e-24 116.3 140 44.3
Medtr5g056540 Medicago truncatula HOM05D001338 ORTHO05D001239 8.1e-24 115.2 127 45.7
PSO384G1931 Papaver somniferum HOM05D001338 ORTHO05D001239 3.1e-23 113.2 115 47.0
PSO541G2431 Papaver somniferum HOM05D001338 ORTHO05D001239 8.9e-23 111.7 127 40.2
Glyma.14G107400 Glycine max HOM05D001338 ORTHO05D001239 1.2e-22 111.3 107 47.7
HanXRQChr10g0286761 Helianthus annuus HOM05D001338 ORTHO05D001239 2.0e-22 110.5 267 43.8
Sp1g32380 Schrenkiella parvula HOM05D001338 ORTHO05D001239 2.0e-22 110.5 151 42.4
PSO724G1235 Papaver somniferum HOM05D001338 ORTHO05D001239 2.6e-22 110.2 239 37.2
Oeu053421.1 Olea europaea HOM05D001338 ORTHO05D001239 3.4e-22 109.8 125 43.2
TPR.G34669 Trifolium pratense HOM05D001338 ORTHO05D001239 5.8e-22 109.0 137 43.8
Zm00001eb123550 Zea mays HOM05D001338 ORTHO05D001239 7.5e-22 108.6 231 35.5
Oeu063134.1 Olea europaea HOM05D001338 ORTHO05D001239 9.8e-22 108.2 111 45.0
MD02G1227000 Malus domestica HOM05D000696 ORTHO05D001239 1.7e-21 107.5 120 45.0
PSO801G0142 Papaver somniferum HOM05D001338 ORTHO05D001239 1.7e-21 107.5 122 42.6
Zm00001eb109540 Zea mays HOM05D001338 ORTHO05D001239 1.7e-21 107.5 98 53.1
Zm00001eb125380 Zea mays HOM05D001338 ORTHO05D001239 1.7e-21 107.5 98 53.1
Zm00001eb152380 Zea mays HOM05D001338 ORTHO05D001239 1.7e-21 107.5 231 35.1
TWI74G0662 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 2.9e-21 106.7 136 42.6
CANSAT11G0800 Cannabis sativa HOM05D001338 ORTHO05D001239 8.3e-21 105.1 122 45.1
PSO138G0010 Papaver somniferum HOM05D001338 ORTHO05D001239 1.1e-20 104.8 87 57.5
PSO724G0974 Papaver somniferum HOM05D001338 ORTHO05D001239 1.1e-20 104.8 260 28.1
RcHm_v2.0_Chr1g0320361 Rosa chinensis HOM05D001338 ORTHO05D001239 3.2e-20 103.2 140 39.3
Gohir.D06G166250 Gossypium hirsutum HOM05D001338 ORTHO05D001239 1.2e-19 101.3 139 36.7
Oeu048409.1 Olea europaea HOM05D001338 ORTHO05D001239 1.2e-19 101.3 110 43.6
Sp6g08540 Schrenkiella parvula HOM05D001338 ORTHO05D001239 1.6e-19 100.9 136 43.4
TWI81G1066 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 2.1e-19 100.5 81 53.1
CANSAT01G1009 Cannabis sativa HOM05D001338 ORTHO05D001239 3.5e-19 99.8 119 44.5
Oeu023192.1 Olea europaea HOM05D001338 ORTHO05D001239 7.8e-19 98.6 86 52.3
PSO782G2576 Papaver somniferum HOM05D001338 ORTHO05D001239 1.3e-18 97.8 99 45.5
RcHm_v2.0_Chr6g0308901 Rosa chinensis HOM05D001338 ORTHO05D001239 2.3e-18 97.1 77 58.4
PSO384G2104 Papaver somniferum HOM05D001338 ORTHO05D001239 3.0e-18 96.7 85 51.8
RcHm_v2.0_Chr7g0230921 Rosa chinensis HOM05D001338 ORTHO05D029707 3.9e-18 96.3 106 50.9
AT1G35150 Arabidopsis thaliana HOM05D001338 ORTHO05D001239 7.3e-17 92.0 153 38.6
PSO210G4276 Papaver somniferum HOM05D001338 ORTHO05D001239 1.2e-16 91.3 85 48.2
PSO461G0028 Papaver somniferum HOM05D001338 ORTHO05D001239 8.1e-16 88.6 81 48.1
CANSAT46G0001 Cannabis sativa HOM05D001338 ORTHO05D001239 1.4e-15 87.8 123 40.7
CiPaw.04G075300 Carya illinoinensis HOM05D001338 ORTHO05D001239 5.2e-15 85.9 86 48.8
FvH4_7g07902 Fragaria vesca HOM05D001338 ORTHO05D001239 1.2e-14 84.7 71 53.5
Oeu005280.1 Olea europaea HOM05D001338 ORTHO05D001239 3.4e-14 83.2 76 48.7
Oeu063541.1 Olea europaea HOM05D001338 ORTHO05D001239 3.4e-14 83.2 101 41.6
SpUn0007_0210 Schrenkiella parvula HOM05D001338 ORTHO05D001239 5.8e-14 82.4 115 41.7
AUR62037832 Chenopodium quinoa HOM05D001338 ORTHO05D001239 1.3e-13 81.3 120 40.0
FvH4_1g10851 Fragaria vesca HOM05D001338 ORTHO05D001239 4.9e-13 79.3 131 35.1
Oeu052557.1 Olea europaea HOM05D001338 ORTHO05D001239 1.1e-12 78.2 70 47.1
Oeu034372.1 Olea europaea HOM05D001338 ORTHO05D001239 3.2e-12 76.6 70 45.7
Oeu064839.1 Olea europaea HOM05D001338 ORTHO05D001239 4.1e-12 76.3 53 56.6
Oeu034167.1 Olea europaea HOM05D001338 ORTHO05D001239 5.4e-12 75.9 63 55.6
TWI74G1236 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 7.1e-12 75.5 119 37.8
Zm00001eb204510 Zea mays HOM05D001338 ORTHO05D001239 7.1e-12 75.5 62 51.6
CiPaw.15G122600 Carya illinoinensis HOM05D001338 ORTHO05D001239 3.5e-11 73.2 87 42.5
CANSAT54G1041 Cannabis sativa HOM05D001338 ORTHO05D001239 4.6e-11 72.8 136 34.6
Oeu012177.1 Olea europaea HOM05D001338 ORTHO05D001239 4.6e-11 72.8 67 47.8
Oeu012998.1 Olea europaea HOM05D001338 ORTHO05D001239 6.0e-11 72.4 70 44.3
Oeu020403.1 Olea europaea HOM05D001338 ORTHO05D001239 6.0e-11 72.4 70 45.7
AT2G06500 Arabidopsis thaliana HOM05D001338 ORTHO05D001239 1.9e-09 67.4 45 64.4
Oeu025447.1 Olea europaea HOM05D001338 ORTHO05D001239 2.5e-09 67.0 61 50.8
TPR.G17453 Trifolium pratense HOM05D001338 ORTHO05D001239 3.3e-09 66.6 68 47.1
Oeu023799.1 Olea europaea HOM05D001338 ORTHO05D001239 4.3e-09 66.2 73 42.5
TPR.G25675 Trifolium pratense HOM05D000006 ORTHO05D000001 5.6e-09 65.9 74 41.9
CSS0007608 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 2.8e-08 63.5 62 43.5
CSS0039736 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 3.6e-08 63.2 64 43.8
PSO063G5722 Papaver somniferum HOM05D001338 ORTHO05D001239 6.2e-08 62.4 136 31.6
Sp4g09890 Schrenkiella parvula HOM05D001338 ORTHO05D001239 6.2e-08 62.4 69 53.6
Sopen11g008380 Solanum pennellii HOM05D000254 ORTHO05D000165 8.1e-08 62.0 83 37.3
CSS0011720 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 1.1e-07 61.6 54 46.3
Sopen09g021430 Solanum pennellii HOM05D000254 ORTHO05D000165 2.4e-07 60.5 83 36.1
Sopen03g006690 Solanum pennellii HOM05D000254 ORTHO05D000165 3.1e-07 60.1 115 31.3
Sopen09g021130 Solanum pennellii HOM05D000254 ORTHO05D000165 3.1e-07 60.1 110 32.7
Medtr7g446190 Medicago truncatula HOM05D000132 ORTHO05D000058 1.2e-06 58.2 68 44.1
CiPaw.02G115100 Carya illinoinensis HOM05D001338 ORTHO05D001239 2.6e-06 57.0 47 51.1
Oeu006251.1 Olea europaea HOM05D001338 ORTHO05D001239 2.6e-06 57.0 153 26.8
Oeu037760.1 Olea europaea HOM05D001338 ORTHO05D001239 3.4e-06 56.6 135 30.4
Glyma.10G055700 Glycine max HOM05D000254 ORTHO05D000165 7.6e-06 55.5 131 31.3
Oeu052066.1 Olea europaea HOM05D001338 ORTHO05D001239 7.6e-06 55.5 49 49.0
TPR.G18474 Trifolium pratense HOM05D000254 ORTHO05D000165 9.9e-06 55.1 123 29.3


User provided reference genes

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