Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G20680 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 3.4e-149 531.6 253 100.0
AL2G22210 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 2.7e-146 521.9 253 97.2
AL1G50260 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 5.4e-139 497.7 251 94.0
AL7G11610 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 7.1e-139 497.3 239 97.9
AL5G12750 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 1.6e-138 496.1 239 97.5
AL1G59760 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 4.6e-138 494.6 239 97.5
AL2G19880 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 5.1e-129 464.5 265 86.0
AL6G41880 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 2.2e-124 449.1 214 98.1
AL9U11430 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 1.3e-108 396.7 251 78.5
Carub.0001s3686 Capsella rubella HOM05D012762 ORTHO05D011313 6.2e-26 122.1 253 31.2
Carub.0006s2623 Capsella rubella HOM05D012762 ORTHO05D011313 1.1e-25 121.3 249 30.5
Carub.0002s1156 Capsella rubella HOM05D011333 ORTHO05D011313 1.8e-25 120.6 268 29.5
Carub.0007s3609 Capsella rubella HOM05D011333 ORTHO05D011313 5.2e-25 119.0 276 30.1
AL5G17280 Arabidopsis lyrata HOM05D039756 ORTHO05D011313 8.9e-25 118.2 210 33.8
Carub.0149s0001 Capsella rubella HOM05D011333 ORTHO05D011313 2.0e-24 117.1 255 29.0
AL7G50330 Arabidopsis lyrata HOM05D039756 ORTHO05D011313 1.4e-22 110.9 208 31.7
Carub.0001s3421 Capsella rubella HOM05D012762 ORTHO05D011313 5.4e-22 109.0 254 30.3
Carub.0016s0014 Capsella rubella HOM05D012762 ORTHO05D011313 9.2e-22 108.2 253 28.9
Carub.0012s0012 Capsella rubella HOM05D012762 ORTHO05D011313 3.5e-21 106.3 263 27.8
Carub.0001s3685 Capsella rubella HOM05D012762 ORTHO05D011313 2.8e-18 96.7 252 27.4
Carub.0012s0009 Capsella rubella HOM05D011333 ORTHO05D011313 3.1e-17 93.2 247 26.3
Carub.0003s2757 Capsella rubella HOM05D011333 ORTHO05D011313 2.0e-16 90.5 265 26.8
Carub.0076s0002 Capsella rubella HOM05D012762 ORTHO05D011313 8.4e-15 85.1 236 28.0
BcaB08g34629 Brassica carinata HOM05D007568 ORTHO05D009779 1.1e-14 84.7 231 27.7
Carub.0001s3396 Capsella rubella HOM05D011333 ORTHO05D011313 1.1e-14 84.7 244 25.4
AL5G12730 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 5.4e-14 82.4 231 27.3
AL9U11480 Arabidopsis lyrata HOM05D000353 ORTHO05D011313 7.1e-14 82.0 232 26.7
AL8G21940 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 9.2e-14 81.6 231 27.3
AL1G50720 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.6e-13 80.9 231 27.3
C01p17360 Brassica napus HOM05D007568 ORTHO05D009779 1.1e-11 74.7 257 26.5
BcaC04g21059 Brassica carinata HOM05D000353 ORTHO05D000174 9.6e-11 71.6 224 26.3
C03p86040 Brassica napus HOM05D007568 ORTHO05D009779 1.2e-10 71.2 257 26.1
BcaC03g17782 Brassica carinata HOM05D000353 ORTHO05D000174 2.1e-10 70.5 230 25.7
AL2G19900 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 4.7e-10 69.3 213 26.3
AL2G22230 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 4.7e-10 69.3 213 26.3
AL4G20700 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 4.7e-10 69.3 213 26.3
AL6G41900 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 4.7e-10 69.3 213 26.3
AL7G11630 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 4.7e-10 69.3 213 26.3
BcaB05g25263 Brassica carinata HOM05D007568 ORTHO05D009779 8.1e-10 68.6 251 27.1
BcaB03g16823 Brassica carinata HOM05D000353 ORTHO05D000174 1.1e-09 68.2 224 26.8
BcaB07g31875 Brassica carinata HOM05D007568 ORTHO05D009779 1.1e-09 68.2 251 26.3
BcaC02g07795 Brassica carinata HOM05D000353 ORTHO05D000174 1.1e-09 68.2 264 23.5
BolC9t55696H Brassica oleracea HOM05D000353 ORTHO05D000174 1.1e-09 68.2 264 23.5
C08p32530 Brassica napus HOM05D000353 ORTHO05D000174 1.4e-09 67.8 226 26.1
AL2G19910 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 3.1e-09 66.6 235 25.5
BcaB04g20792 Brassica carinata HOM05D007568 ORTHO05D009779 3.1e-09 66.6 230 28.3
BcaC02g07867 Brassica carinata HOM05D000353 ORTHO05D000174 3.1e-09 66.6 224 25.4
C01p31900 Brassica napus HOM05D000353 ORTHO05D000174 4.0e-09 66.2 226 26.1
AL5G12720 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 5.2e-09 65.9 235 25.5
AL6G41910 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 5.2e-09 65.9 235 25.5
C01p40510 Brassica napus HOM05D000353 ORTHO05D000174 9.0e-09 65.1 229 25.8
BcaC09g49290 Brassica carinata HOM05D000353 ORTHO05D000174 1.2e-08 64.7 225 25.8
BcaC01g03267 Brassica carinata HOM05D000353 ORTHO05D000174 1.5e-08 64.3 250 26.0
C03p46930 Brassica napus HOM05D000353 ORTHO05D000174 2.6e-08 63.5 241 24.9
C05p51080 Brassica napus HOM05D000353 ORTHO05D000174 2.6e-08 63.5 222 23.9
AL2G22240 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 4.4e-08 62.8 242 25.6
BcaC05g28066 Brassica carinata HOM05D000353 ORTHO05D000174 4.4e-08 62.8 226 25.2
C05p40800 Brassica napus HOM05D000353 ORTHO05D000174 4.4e-08 62.8 226 25.2
A05p27540 Brassica napus HOM05D007568 ORTHO05D009779 5.8e-08 62.4 247 23.9
C09p45710 Brassica napus HOM05D000353 ORTHO05D000174 1.3e-07 61.2 229 24.9
C02p26050 Brassica napus HOM05D007568 ORTHO05D009779 1.7e-07 60.8 247 24.3
C02p26010 Brassica napus HOM05D007568 ORTHO05D009779 3.8e-07 59.7 234 24.4
C07p17710 Brassica napus HOM05D000353 ORTHO05D000174 3.8e-07 59.7 234 23.1
BcaB08g34954 Brassica carinata HOM05D000353 ORTHO05D000174 4.9e-07 59.3 246 25.6
C09p29030 Brassica napus HOM05D000353 ORTHO05D000174 4.9e-07 59.3 83 33.7
BolC4t25354H Brassica oleracea HOM05D007568 ORTHO05D009779 4.9e-07 59.3 246 24.8
BolC7t44430H Brassica oleracea HOM05D000353 ORTHO05D000174 4.9e-07 59.3 83 33.7
BcaB02g11011 Brassica carinata HOM05D007568 ORTHO05D009779 8.4e-07 58.5 223 23.8
AT1G52950 Arabidopsis thaliana HOM05D000353 ORTHO05D000174 1.1e-06 58.2 243 24.7
BolC1t03183H Brassica oleracea HOM05D000353 ORTHO05D000174 1.1e-06 58.2 235 26.4
A03p66080 Brassica napus HOM05D007568 ORTHO05D009779 1.4e-06 57.8 224 25.9
A05p17030 Brassica napus HOM05D007568 ORTHO05D009779 1.4e-06 57.8 224 25.9
C04p64600 Brassica napus HOM05D000353 ORTHO05D000174 1.4e-06 57.8 229 23.1
BcaB03g15167 Brassica carinata HOM05D000353 ORTHO05D000174 1.9e-06 57.4 80 35.0
A04p27050 Brassica napus HOM05D000353 ORTHO05D000174 1.9e-06 57.4 223 23.8
A05p20920 Brassica napus HOM05D000353 ORTHO05D000174 1.9e-06 57.4 229 23.1
C08p30740 Brassica napus HOM05D000353 ORTHO05D000174 1.9e-06 57.4 229 23.1
C09p23350 Brassica napus HOM05D000353 ORTHO05D000174 1.9e-06 57.4 228 24.1
BolC1t04067H Brassica oleracea HOM05D000353 ORTHO05D000174 1.9e-06 57.4 229 23.1
BraA05t20997Z Brassica rapa HOM05D000353 ORTHO05D000174 1.9e-06 57.4 229 23.1
BcaC03g14055 Brassica carinata HOM05D000353 ORTHO05D000174 3.2e-06 56.6 83 31.3
BcaC05g25257 Brassica carinata HOM05D000353 ORTHO05D000174 3.2e-06 56.6 229 27.5
BcaNung03554 Brassica carinata HOM05D000353 ORTHO05D000174 3.2e-06 56.6 83 31.3
A01p26990 Brassica napus HOM05D000353 ORTHO05D000174 3.2e-06 56.6 238 23.9
BolC7t44984H Brassica oleracea HOM05D000353 ORTHO05D000174 3.2e-06 56.6 243 23.9
BraA08t32474Z Brassica rapa HOM05D000353 ORTHO05D000174 3.2e-06 56.6 229 24.5
Sp6g07340 Schrenkiella parvula HOM05D000353 ORTHO05D000174 3.2e-06 56.6 238 23.5
AL2G19950 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 4.2e-06 56.2 220 26.4
BcaC07g40033 Brassica carinata HOM05D000353 ORTHO05D000174 4.2e-06 56.2 205 23.9
C04p11940 Brassica napus HOM05D000353 ORTHO05D000174 4.2e-06 56.2 247 22.3
A05p27520 Brassica napus HOM05D000353 ORTHO05D000174 5.4e-06 55.8 246 24.8
BcaC08g47014 Brassica carinata HOM05D000353 ORTHO05D000174 9.3e-06 55.1 80 33.8
BolC9t53770H Brassica oleracea HOM05D000353 ORTHO05D000174 9.3e-06 55.1 80 32.5


User provided reference genes

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