Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G20370 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.0e-181 639.8 297 100.0
Carub.0004s1987 Capsella rubella HOM05D000209 ORTHO05D000129 6.4e-91 338.2 461 45.3
Carub.0004s1988 Capsella rubella HOM05D000209 ORTHO05D000129 3.5e-52 209.5 331 41.7
Carub.0004s2469 Capsella rubella HOM05D000209 ORTHO05D000129 2.5e-34 150.2 354 32.2
Thhalv10017976m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 5.5e-34 149.1 343 32.7
BraA01t00526Z Brassica rapa HOM05D000209 ORTHO05D000129 1.6e-28 131.0 343 28.9
A01p05550 Brassica napus HOM05D000209 ORTHO05D000129 3.5e-28 129.8 343 28.9
BcaC09g52071 Brassica carinata HOM05D000209 ORTHO05D000129 1.6e-25 120.9 327 28.1
Carub.0003s1632 Capsella rubella HOM05D000209 ORTHO05D000129 2.3e-19 100.5 351 27.9
AL3G29510 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.2e-17 94.7 349 26.1
AT3G16590 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.2e-17 94.7 129 41.1
C01p47430 Brassica napus HOM05D000209 ORTHO05D000129 1.0e-16 91.7 228 28.1
BolC1t04713H Brassica oleracea HOM05D000209 ORTHO05D000129 1.0e-16 91.7 228 28.1
CARHR091820 Cardamine hirsuta HOM05D000209 ORTHO05D000129 2.0e-15 87.4 92 52.2
BolC1t04711H Brassica oleracea HOM05D000209 ORTHO05D000129 5.8e-15 85.9 225 28.0
BolC1t04715H Brassica oleracea HOM05D000209 ORTHO05D000129 5.8e-15 85.9 226 27.9
C03p23100 Brassica napus HOM05D000209 ORTHO05D000129 1.3e-14 84.7 244 29.9
AL2G18580 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.9e-14 83.6 346 25.4
AT1G32430 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 2.9e-14 83.6 160 36.2
AT3G18340 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 8.3e-14 82.0 221 28.1
AT2G07120 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 3.2e-13 80.1 221 27.1
BolC8t52305H Brassica oleracea HOM05D001827 ORTHO05D001790 5.4e-13 79.3 347 25.9
AL2G24872 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 9.2e-13 78.6 230 28.7
A09p64060 Brassica napus HOM05D001827 ORTHO05D001790 1.6e-12 77.8 234 29.5
BraA09t41752Z Brassica rapa HOM05D001827 ORTHO05D001790 1.6e-12 77.8 234 29.5
AT3G16555 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 4.6e-12 76.3 231 27.7
CARHR091800 Cardamine hirsuta HOM05D000209 ORTHO05D000129 6.0e-12 75.9 91 47.3
BcaC01g05693 Brassica carinata HOM05D000209 ORTHO05D000129 7.8e-12 75.5 127 37.0
BraA03t11233Z Brassica rapa HOM05D000209 ORTHO05D000129 7.8e-12 75.5 155 31.6
BcaB04g18961 Brassica carinata HOM05D000209 ORTHO05D000129 1.0e-11 75.1 234 28.2
BraA05t22651Z Brassica rapa HOM05D000209 ORTHO05D000129 1.3e-11 74.7 112 42.0
C03p23130 Brassica napus HOM05D000209 ORTHO05D000129 2.3e-11 73.9 103 39.8
C01p47420 Brassica napus HOM05D000209 ORTHO05D000129 3.0e-11 73.6 94 41.5
BolC1t04712H Brassica oleracea HOM05D000209 ORTHO05D000129 3.0e-11 73.6 94 41.5
BolC3t14712H Brassica oleracea HOM05D000209 ORTHO05D000129 3.0e-11 73.6 86 44.2
Thhalv10022098m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 3.9e-11 73.2 209 30.1
AT3G17710 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 6.6e-11 72.4 233 27.5
AT1G12190 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 8.6e-11 72.0 350 23.4
BcaC01g03737 Brassica carinata HOM05D000209 ORTHO05D000129 8.6e-11 72.0 69 47.8
A05p38600 Brassica napus HOM05D000209 ORTHO05D000129 8.6e-11 72.0 112 41.1
C01p47360 Brassica napus HOM05D000209 ORTHO05D000129 8.6e-11 72.0 94 40.4
Carub.0001s3085 Capsella rubella HOM05D000209 ORTHO05D000129 8.6e-11 72.0 77 48.1
Thhalv10015389m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 8.6e-11 72.0 295 26.4
AL3G46450 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.1e-10 71.6 265 30.2
BcaC09g48638 Brassica carinata HOM05D000209 ORTHO05D000129 1.1e-10 71.6 94 42.6
C01p47440 Brassica napus HOM05D000209 ORTHO05D000129 1.1e-10 71.6 94 42.6
BolC1t04714H Brassica oleracea HOM05D000209 ORTHO05D000129 1.1e-10 71.6 94 42.6
Sp5g16370 Schrenkiella parvula HOM05D000209 ORTHO05D000129 1.1e-10 71.6 79 53.2
Aa31LG7G790 Aethionema arabicum HOM05D000209 ORTHO05D000129 1.5e-10 71.2 98 44.9
BcaB06g25761 Brassica carinata HOM05D000209 ORTHO05D000129 1.5e-10 71.2 90 44.4
C05p31410 Brassica napus HOM05D000209 ORTHO05D000129 1.5e-10 71.2 80 52.5
BolC5t31863H Brassica oleracea HOM05D000209 ORTHO05D000129 1.5e-10 71.2 80 52.5
AL1G46660 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.9e-10 70.9 89 43.8
BcaB07g32863 Brassica carinata HOM05D000209 ORTHO05D000129 1.9e-10 70.9 89 49.4
Carub.0001s1187 Capsella rubella HOM05D000209 ORTHO05D000129 1.9e-10 70.9 351 22.8
AL1G46640 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.5e-10 70.5 77 49.4
BcaC05g27227 Brassica carinata HOM05D000209 ORTHO05D000129 3.3e-10 70.1 80 51.2
BolC3t17196H Brassica oleracea HOM05D000209 ORTHO05D000129 3.3e-10 70.1 230 27.0
BraA03t13186Z Brassica rapa HOM05D000209 ORTHO05D000129 3.3e-10 70.1 230 27.0
Carub.0003s1746 Capsella rubella HOM05D000209 ORTHO05D000129 3.3e-10 70.1 220 26.4
BcaC01g03735 Brassica carinata HOM05D000209 ORTHO05D000129 4.3e-10 69.7 231 26.8
AL1G59140 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 5.6e-10 69.3 117 39.3
BcaB06g28889 Brassica carinata HOM05D000209 ORTHO05D000129 5.6e-10 69.3 104 41.3
BolC5t33724H Brassica oleracea HOM05D000209 ORTHO05D000129 7.3e-10 68.9 79 48.1
Thhalv10021923m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 7.3e-10 68.9 67 53.7
BcaC05g28864 Brassica carinata HOM05D000209 ORTHO05D031975 9.5e-10 68.6 82 50.0
AL3G29470 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.2e-09 68.2 82 50.0
AT3G16580 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.2e-09 68.2 81 50.6
A09p34150 Brassica napus HOM05D000209 ORTHO05D000129 1.2e-09 68.2 77 53.2
BcaB01g03872 Brassica carinata HOM05D000209 ORTHO05D000129 1.6e-09 67.8 80 46.2
BcaB01g05466 Brassica carinata HOM05D000209 ORTHO05D000129 1.6e-09 67.8 69 49.3
C03p05900 Brassica napus HOM05D000209 ORTHO05D000129 1.6e-09 67.8 69 49.3
BolC3t13102H Brassica oleracea HOM05D000209 ORTHO05D000129 1.6e-09 67.8 69 49.3
AT3G44130 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 2.1e-09 67.4 56 51.8
BcaB04g20442 Brassica carinata HOM05D000209 ORTHO05D000129 2.1e-09 67.4 234 25.2
A03p19810 Brassica napus HOM05D000209 ORTHO05D000129 2.1e-09 67.4 73 49.3
C03p49150 Brassica napus HOM05D000209 ORTHO05D000129 2.1e-09 67.4 237 26.2
BcaC02g07660 Brassica carinata HOM05D000209 ORTHO05D000129 2.8e-09 67.0 95 43.2
AL1G53610 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.6e-09 66.6 104 44.2
AL3G29460 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.6e-09 66.6 90 40.0
A03p40370 Brassica napus HOM05D000209 ORTHO05D000129 3.6e-09 66.6 227 26.0
CARHR036380 Cardamine hirsuta HOM05D000209 ORTHO05D000129 3.6e-09 66.6 89 44.9
Thhalv10019738m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 3.6e-09 66.6 100 39.0
AT1G51320 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 4.7e-09 66.2 71 49.3
A05p32960 Brassica napus HOM05D000209 ORTHO05D031975 4.7e-09 66.2 68 50.0
BraA05t22121Z Brassica rapa HOM05D000209 ORTHO05D031975 4.7e-09 66.2 68 50.0
Carub.0003s3128 Capsella rubella HOM05D000209 ORTHO05D000129 4.7e-09 66.2 234 26.1
Thhalv10022412m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 4.7e-09 66.2 178 33.1
A05p32950 Brassica napus HOM05D000209 ORTHO05D000129 6.2e-09 65.9 80 48.8
BraA05t22120Z Brassica rapa HOM05D000209 ORTHO05D000129 6.2e-09 65.9 80 48.8
AL3G30870 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 8.0e-09 65.5 68 38.2
BcaC02g07659 Brassica carinata HOM05D000209 ORTHO05D000129 8.0e-09 65.5 104 40.4
C04p64880 Brassica napus HOM05D000209 ORTHO05D000129 8.0e-09 65.5 104 40.4
BolC3t17660H Brassica oleracea HOM05D000209 ORTHO05D000129 8.0e-09 65.5 104 41.3
BolC4t27963H Brassica oleracea HOM05D000209 ORTHO05D000129 8.0e-09 65.5 104 40.4
Thhalv10022086m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 8.0e-09 65.5 105 40.0
BcaC01g05695 Brassica carinata HOM05D000209 ORTHO05D000129 1.4e-08 64.7 67 49.3
C03p23110 Brassica napus HOM05D000209 ORTHO05D000129 1.4e-08 64.7 67 49.3
C03p54750 Brassica napus HOM05D000209 ORTHO05D000129 1.4e-08 64.7 87 47.1
Carub.0003s1631 Capsella rubella HOM05D000209 ORTHO05D000129 1.4e-08 64.7 82 45.1
Thhalv10002898m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 1.4e-08 64.7 266 25.2
Carub.0003s2850 Capsella rubella HOM05D000209 ORTHO05D000129 1.8e-08 64.3 148 31.8
Sp1g27690 Schrenkiella parvula HOM05D000209 ORTHO05D000129 1.8e-08 64.3 80 50.0
Carub.0003s2862 Capsella rubella HOM05D000209 ORTHO05D000129 2.3e-08 63.9 103 38.8
BcaC05g28867 Brassica carinata HOM05D000209 ORTHO05D000129 3.1e-08 63.5 78 46.2
C05p49730 Brassica napus HOM05D000209 ORTHO05D000129 3.1e-08 63.5 78 46.2
BcaC02g07658 Brassica carinata HOM05D000209 ORTHO05D000129 4.0e-08 63.2 92 39.1
AL2G24874 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 6.8e-08 62.4 184 26.1
C08p47640 Brassica napus HOM05D001827 ORTHO05D001790 8.9e-08 62.0 75 50.7
Carub.0001s3084 Capsella rubella HOM05D000209 ORTHO05D000129 8.9e-08 62.0 80 46.2
AL3G50200 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.2e-07 61.6 236 25.4
AT2G17310 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.2e-07 61.6 235 25.1
A03p40360 Brassica napus HOM05D000209 ORTHO05D000129 1.2e-07 61.6 230 24.8
Carub.0003s2861 Capsella rubella HOM05D000209 ORTHO05D000129 1.2e-07 61.6 86 41.9
Carub.0005s0137 Capsella rubella HOM05D000209 ORTHO05D000129 1.2e-07 61.6 219 25.6
CARHR036940 Cardamine hirsuta HOM05D000209 ORTHO05D000129 1.5e-07 61.2 69 47.8
AL1G53620 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.0e-07 60.8 74 45.9
BolC1t04706H Brassica oleracea HOM05D000209 ORTHO05D000129 2.0e-07 60.8 65 44.6
CARHR036970 Cardamine hirsuta HOM05D000209 ORTHO05D000129 2.0e-07 60.8 65 53.8
AT2G14710 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 2.6e-07 60.5 104 39.4
BcaC05g29450 Brassica carinata HOM05D000209 ORTHO05D000129 2.6e-07 60.5 69 49.3
AL3G46410 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.4e-07 60.1 90 42.2
BcaB04g20802 Brassica carinata HOM05D000209 ORTHO05D000129 3.4e-07 60.1 72 43.1
A07p41610 Brassica napus HOM05D000209 ORTHO05D000129 3.4e-07 60.1 74 40.5
C04p64900 Brassica napus HOM05D000209 ORTHO05D000129 3.4e-07 60.1 69 46.4
Carub.0003s2859 Capsella rubella HOM05D000209 ORTHO05D000129 3.4e-07 60.1 98 39.8
A01p36440 Brassica napus HOM05D000209 ORTHO05D000129 4.4e-07 59.7 72 44.4
A04p27360 Brassica napus HOM05D000209 ORTHO05D000129 4.4e-07 59.7 92 38.0
A07p41550 Brassica napus HOM05D000209 ORTHO05D000129 4.4e-07 59.7 76 40.8
A07p41580 Brassica napus HOM05D000209 ORTHO05D000129 4.4e-07 59.7 76 40.8
C05p48660 Brassica napus HOM05D000209 ORTHO05D000129 4.4e-07 59.7 228 26.8
C07p57010 Brassica napus HOM05D000209 ORTHO05D000129 4.4e-07 59.7 69 43.5
BolC5t33601H Brassica oleracea HOM05D000209 ORTHO05D000129 4.4e-07 59.7 228 26.8
BraA01t03707Z Brassica rapa HOM05D002896 ORTHO05D003263 4.4e-07 59.7 72 44.4
BraA04t18234Z Brassica rapa HOM05D000209 ORTHO05D000129 4.4e-07 59.7 92 38.0
AL1G23460 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 5.8e-07 59.3 85 40.0
C05p57500 Brassica napus HOM05D000209 ORTHO05D000129 5.8e-07 59.3 69 47.8
BolC5t34407H Brassica oleracea HOM05D000209 ORTHO05D000129 5.8e-07 59.3 69 47.8
BraA07t31687Z Brassica rapa HOM05D000209 ORTHO05D000129 5.8e-07 59.3 75 42.7
BraA07t31690Z Brassica rapa HOM05D000209 ORTHO05D000129 5.8e-07 59.3 75 42.7
Carub.0003s2873 Capsella rubella HOM05D000209 ORTHO05D000129 5.8e-07 59.3 80 43.8
BcaB06g25830 Brassica carinata HOM05D000209 ORTHO05D000129 7.5e-07 58.9 74 44.6
A01p36610 Brassica napus HOM05D000209 ORTHO05D000129 9.8e-07 58.5 73 42.5
A05p32120 Brassica napus HOM05D000209 ORTHO05D000129 9.8e-07 58.5 230 27.0
BraA01t03726Z Brassica rapa HOM05D000209 ORTHO05D000129 9.8e-07 58.5 73 42.5
AL1G23440 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.3e-06 58.2 82 40.2
CARHR107440 Cardamine hirsuta HOM05D000209 ORTHO05D000129 1.3e-06 58.2 217 25.8
Thhalv10019557m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 1.3e-06 58.2 79 39.2
AL3G29400 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.7e-06 57.8 195 27.2
BcaC05g29449 Brassica carinata HOM05D000209 ORTHO05D000129 1.7e-06 57.8 76 48.7
BcaC09g48733 Brassica carinata HOM05D000209 ORTHO05D000129 1.7e-06 57.8 73 41.1
BcaNung06520 Brassica carinata HOM05D000209 ORTHO05D000129 1.7e-06 57.8 76 48.7
BolC1t04609H Brassica oleracea HOM05D000209 ORTHO05D000129 1.7e-06 57.8 73 41.1
Thhalv10023851m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 1.7e-06 57.8 72 38.9
BcaB04g18962 Brassica carinata HOM05D000209 ORTHO05D000129 2.2e-06 57.4 69 40.6
Thhalv10019791m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 2.2e-06 57.4 89 38.2
AL3G28960 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.9e-06 57.0 90 36.7
AL3G28980 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.9e-06 57.0 90 36.7
AT1G12170 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 2.9e-06 57.0 82 39.0
BcaB04g20801 Brassica carinata HOM05D000209 ORTHO05D000129 2.9e-06 57.0 72 41.7
BcaB06g25760 Brassica carinata HOM05D000209 ORTHO05D000129 2.9e-06 57.0 80 45.0
Carub.0002s0668 Capsella rubella HOM05D000209 ORTHO05D000129 2.9e-06 57.0 93 34.4
AL3G36630 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.7e-06 56.6 117 29.9
AL4G34910 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.7e-06 56.6 31 90.3
AT1G51290 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 3.7e-06 56.6 93 37.6
BcaNung05492 Brassica carinata HOM05D000209 ORTHO05D000129 3.7e-06 56.6 178 27.5
C01p46190 Brassica napus HOM05D000209 ORTHO05D000129 3.7e-06 56.6 72 43.1
BolC1t04581H Brassica oleracea HOM05D000209 ORTHO05D000129 3.7e-06 56.6 72 43.1
Thhalv10009548m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 3.7e-06 56.6 56 57.1
BraA09t38965Z Brassica rapa HOM05D000209 ORTHO05D000129 4.9e-06 56.2 58 55.2
Thhalv10017596m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 4.9e-06 56.2 92 43.5
AT1G53325 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 8.3e-06 55.5 98 35.7
C06p49990 Brassica napus HOM05D000209 ORTHO05D000129 8.3e-06 55.5 86 38.4
BolC6t40038H Brassica oleracea HOM05D000209 ORTHO05D000129 8.3e-06 55.5 86 38.4
Carub.0003s2653 Capsella rubella HOM05D000209 ORTHO05D000129 8.3e-06 55.5 72 34.7


User provided reference genes

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