Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G20290 Arabidopsis lyrata HOM05D005646 ORTHO05D006828 3.4e-74 281.6 142 100.0
AL4G36080 Arabidopsis lyrata HOM05D005646 ORTHO05D006828 5.0e-49 198.0 125 80.8
Carub.0004s2080 Capsella rubella HOM05D005646 ORTHO05D006828 2.5e-48 195.7 128 78.1
CARHR133490 Cardamine hirsuta HOM05D005646 ORTHO05D006828 4.6e-47 191.4 125 76.8
AT2G38780 Arabidopsis thaliana HOM05D005646 ORTHO05D006828 1.0e-46 190.3 148 69.6
Sp4g21170 Schrenkiella parvula HOM05D005646 ORTHO05D006828 3.7e-44 181.8 126 77.0
A03p21590 Brassica napus HOM05D005646 ORTHO05D006828 4.1e-43 178.3 126 73.8
C03p25580 Brassica napus HOM05D005646 ORTHO05D006828 3.4e-42 175.3 126 73.0
AL4G20430 Arabidopsis lyrata HOM05D005646 ORTHO05D006828 6.5e-41 171.0 100 88.0
BraA03t11395Z Brassica rapa HOM05D005646 ORTHO05D006828 7.9e-39 164.1 145 64.1
BolC3t14946H Brassica oleracea HOM05D005646 ORTHO05D006828 2.3e-38 162.5 145 62.8
THA.LOC104824183 Tarenaya hassleriana HOM05D005646 ORTHO05D006828 2.8e-36 155.6 125 65.6
Sed0017230 Sechium edule HOM05D005646 ORTHO05D006828 7.2e-32 141.0 118 61.0
Aa31LG5G20900 Aethionema arabicum HOM05D005646 ORTHO05D006828 9.4e-32 140.6 158 53.8
Peaxi162Scf00309g00328 Petunia axillaris HOM05D005646 ORTHO05D006828 1.2e-31 140.2 118 60.2
CAN.G1571.4 Capsicum annuum HOM05D005646 ORTHO05D006828 1.6e-31 139.8 125 57.6
Solyc01g068470.4 Solanum lycopersicum HOM05D005646 ORTHO05D006828 1.6e-31 139.8 125 58.4
Sopen01g030430 Solanum pennellii HOM05D005646 ORTHO05D006828 4.7e-31 138.3 122 57.4
Nitab4.5_0000316g0120 Nicotiana tabacum HOM05D005646 ORTHO05D006828 6.1e-31 137.9 125 57.6
COL.COLO4_33459 Corchorus olitorius HOM05D005646 ORTHO05D006828 1.0e-30 137.1 122 57.4
Gohir.D10G253200 Gossypium hirsutum HOM05D005646 ORTHO05D006828 1.4e-30 136.7 118 60.2
Gorai.011G293500 Gossypium raimondii HOM05D005646 ORTHO05D006828 1.8e-30 136.3 118 59.3
ClCG01G007660 Citrullus lanatus HOM05D005646 ORTHO05D006828 2.3e-30 136.0 118 61.0
CSS0050243 Camellia sinensis var. sinensis HOM05D005646 ORTHO05D006828 3.0e-30 135.6 125 56.0
CsaV3_5G024710 Cucumis sativus L. HOM05D005646 ORTHO05D006828 3.0e-30 135.6 116 62.9
Gohir.A10G241000 Gossypium hirsutum HOM05D005646 ORTHO05D006828 3.0e-30 135.6 118 59.3
Thhalv10016593m.g Eutrema salsugineum HOM05D005646 ORTHO05D006828 4.0e-30 135.2 82 81.7
Ah.10g030810 Amaranthus hybridus HOM05D005646 ORTHO05D006828 5.2e-30 134.8 117 59.8
CSS0034883 Camellia sinensis var. sinensis HOM05D005646 ORTHO05D006828 1.5e-29 133.3 125 55.2
MBI19_g40603_MAGBIO Magnolia biondii HOM05D005646 ORTHO05D006828 1.5e-29 133.3 121 59.5
Cc02_g29140 Coffea canephora HOM05D005646 ORTHO05D006828 2.0e-29 132.9 118 58.5
Lalb_Chr03g0025471 Lupinus albus HOM05D005646 ORTHO05D006828 2.0e-29 132.9 124 54.8
Ciclev10031582m.g Citrus clementina HOM05D005646 ORTHO05D006828 2.6e-29 132.5 128 57.0
TWI63G1320 Tripterygium wilfordii HOM05D005646 ORTHO05D006828 2.6e-29 132.5 124 56.5
HanXRQChr16g0525351 Helianthus annuus HOM05D005646 ORTHO05D006828 4.4e-29 131.7 121 58.7
Ca_20909_v3 Cicer arietinum L. HOM05D005646 ORTHO05D006828 5.7e-29 131.3 120 55.8
MELO3C005130.2 Cucumis melo HOM05D005646 ORTHO05D006828 5.7e-29 131.3 120 60.8
arahy.Tifrunner.gnm1.ann1.HJ7TPY Arachis hypogaea HOM05D005646 ORTHO05D006828 7.5e-29 131.0 123 57.7
Manes.11G002900 Manihot esculenta HOM05D005646 ORTHO05D006828 7.5e-29 131.0 118 57.6
Dinv32048 Davidia involucrata HOM05D005646 ORTHO05D006828 1.3e-28 130.2 118 56.8
Sc17g0003830 Simmondsia chinensis HOM05D005646 ORTHO05D006828 1.3e-28 130.2 118 57.6
EL10Ac2g02850 Beta vulgaris HOM05D005646 ORTHO05D006828 1.7e-28 129.8 117 58.1
PGR142G3067 Punica granatum HOM05D005646 ORTHO05D006828 1.7e-28 129.8 124 56.5
Migut.B01206 Erythranthe guttata HOM05D005646 ORTHO05D006828 2.8e-28 129.0 119 56.3
AUR62032557 Chenopodium quinoa HOM05D005646 ORTHO05D006828 3.7e-28 128.6 120 59.2
SGA_v2.0_scaffold249G44948 Striga asiatica HOM05D005646 ORTHO05D006828 3.7e-28 128.6 118 57.6
AUR62031673 Chenopodium quinoa HOM05D005646 ORTHO05D006828 4.8e-28 128.3 120 58.3
Eucgr.J01194 Eucalyptus grandis HOM05D005646 ORTHO05D006828 6.3e-28 127.9 122 51.6
Glyma.11G113800 Glycine max HOM05D005646 ORTHO05D006828 6.3e-28 127.9 126 55.6
Glyma.12G039666 Glycine max HOM05D005646 ORTHO05D006828 1.4e-27 126.7 120 56.7
Lsat_1_v5_gn_4_30541 Lactuca sativa HOM05D005646 ORTHO05D006828 1.4e-27 126.7 121 57.0
Potri.001G024200 Populus trichocarpa HOM05D005646 ORTHO05D006828 1.4e-27 126.7 115 60.9
Sabra01G0018200 Salix brachista HOM05D005646 ORTHO05D000112 1.4e-27 126.7 115 60.0
Hund13332 Selenicereus undatus HOM05D005646 ORTHO05D006828 1.8e-27 126.3 118 55.9
Hma1.2p1_0902F.1_g234850 Hydrangea macrophylla HOM05D005646 ORTHO05D006828 4.1e-27 125.2 122 54.9
SalBow5G2332 Salvia bowleyana HOM05D005646 ORTHO05D006828 4.1e-27 125.2 123 53.7
SalBow5G2661 Salvia bowleyana HOM05D005646 ORTHO05D006828 4.1e-27 125.2 123 53.7
VMungo1127G2196 Vigna mungo HOM05D005646 ORTHO05D006828 5.3e-27 124.8 109 59.6
MD02G1293900 Malus domestica HOM05D005646 ORTHO05D006828 9.1e-27 124.0 122 53.3
DCAR_022352 Daucus carota HOM05D005646 ORTHO05D006828 1.2e-26 123.6 118 54.2
CiPaw.13G011000 Carya illinoinensis HOM05D005646 ORTHO05D006828 1.6e-26 123.2 119 58.0
CANSAT54G2531 Cannabis sativa HOM05D005646 ORTHO05D006828 2.7e-26 122.5 119 53.8
QL04p013757 Quercus lobata HOM05D005646 ORTHO05D006828 3.5e-26 122.1 123 52.8
MSTRG.20533 Avicennia marina HOM05D005646 ORTHO05D006828 4.5e-26 121.7 118 56.8
Medtr4g071010 Medicago truncatula HOM05D005646 ORTHO05D006828 7.7e-26 120.9 119 54.6
ECA234G1046 Erigeron canadensis HOM05D005646 ORTHO05D006828 1.0e-25 120.6 121 54.5
Actinidia19445 Actinidia chinensis HOM05D005646 ORTHO05D006828 1.7e-25 119.8 118 55.1
arahy.Tifrunner.gnm1.ann1.2P0PPD Arachis hypogaea HOM05D005646 ORTHO05D006828 2.2e-25 119.4 107 59.8
Lj3g0019487 Lotus japonicus HOM05D005646 ORTHO05D006828 2.9e-25 119.0 126 50.0
GSVIVG01000839001 Vitis vinifera HOM05D005646 ORTHO05D006828 3.8e-25 118.6 122 52.5
CDE08G1053 Ceratophyllum demersum HOM05D005646 ORTHO05D006828 8.5e-25 117.5 121 55.4
ATR0217G018 Amborella trichopoda HOM05D005646 ORTHO05D006828 1.9e-24 116.3 120 50.0
Atru.chr11.2492 Acer truncatum HOM05D005646 ORTHO05D006828 2.5e-24 115.9 129 47.3
Duzib128G0351 Durio zibethinus HOM05D005646 ORTHO05D006828 3.2e-24 115.5 121 52.1
RcHm_v2.0_Chr7g0221681 Rosa chinensis HOM05D005646 ORTHO05D006828 3.2e-24 115.5 122 50.8
FAN13G1025 Fragaria x ananassa HOM05D005646 ORTHO05D006828 4.2e-24 115.2 122 50.8
PSO017G4843 Papaver somniferum HOM05D005646 ORTHO05D006828 4.2e-24 115.2 125 48.8
Thecc.10G006200 Theobroma cacao HOM05D005646 ORTHO05D006828 4.2e-24 115.2 97 60.8
vmacro13731 Vaccinium macrocarpon HOM05D005646 ORTHO05D006828 4.2e-24 115.2 121 50.4
Aqoxy1G00222 Aquilegia oxysepala HOM05D005646 ORTHO05D006828 7.2e-24 114.4 118 50.8
Lj9A646T48 Lonicera japonica HOM05D005646 ORTHO05D006828 7.2e-24 114.4 128 52.3
PSO341G0002 Papaver somniferum HOM05D005646 ORTHO05D006828 7.2e-24 114.4 122 50.0
FvH4_5g29000 Fragaria vesca HOM05D005646 ORTHO05D006828 9.4e-24 114.0 122 50.0
FAN08G2254 Fragaria x ananassa HOM05D005646 ORTHO05D006828 9.4e-24 114.0 122 50.0
FAN18G3275 Fragaria x ananassa HOM05D005646 ORTHO05D006828 9.4e-24 114.0 122 50.0
PSO063G6839 Papaver somniferum HOM05D005646 ORTHO05D006828 9.4e-24 114.0 122 50.0
TPR.G30507 Trifolium pratense HOM05D005646 ORTHO05D006828 9.4e-24 114.0 120 51.7
unitig_746.g26627 Utricularia gibba HOM05D005646 ORTHO05D006828 5.2e-22 108.2 118 48.3
Atru.chr11.2464 Acer truncatum HOM05D005646 ORTHO05D006828 3.4e-21 105.5 93 55.9
HPP92_001013 Vanilla planifolia HOM05D005646 ORTHO05D006828 4.4e-21 105.1 120 50.0
Rhsim07G0062900 Rhododendron simsii HOM05D005646 ORTHO05D006828 1.3e-20 103.6 125 44.0
Os05g0381500 Oryza sativa ssp. japonica HOM05D005646 ORTHO05D006828 2.8e-20 102.4 122 46.7
SEGI_07819 Sequoiadendron giganteum HOM05D005646 ORTHO05D006828 3.7e-20 102.1 120 51.7
SEGI_35855 Sequoiadendron giganteum HOM05D005646 ORTHO05D006828 3.7e-20 102.1 120 51.7
SEGI_25656 Sequoiadendron giganteum HOM05D005646 ORTHO05D006828 4.8e-20 101.7 122 50.8
Mapoly0066s0082 Marchantia polymorpha HOM05D005646 ORTHO05D006828 1.4e-19 100.1 123 47.2
Nitab4.5_0013777g0020 Nicotiana tabacum HOM05D005646 ORTHO05D006828 4.2e-16 88.6 115 46.1
Haze_03084 Corylus avellana HOM05D005646 ORTHO05D006828 7.2e-16 87.8 52 80.8
Pp3c21_7940 Physcomitrium patens HOM05D005646 ORTHO05D006828 7.2e-16 87.8 118 44.9
SMO145G0178 Selaginella moellendorffii HOM05D005646 ORTHO05D006828 4.7e-15 85.1 128 37.5
Zm00001eb347150 Zea mays HOM05D005646 ORTHO05D006828 6.1e-15 84.7 92 48.9
Cpa.g.sc197.4 Carica papaya HOM05D005646 ORTHO05D006828 8.9e-14 80.9 52 76.9
Nn7g36491 Nelumbo nucifera HOM05D005646 ORTHO05D006828 1.2e-13 80.5 52 75.0
Prupe.2G029800 Prunus persica HOM05D005646 ORTHO05D006828 1.2e-13 80.5 92 48.9
SalBow1G3971 Salvia bowleyana HOM05D005646 ORTHO05D006828 1.8e-11 73.2 47 72.3
Sc15g0003140 Simmondsia chinensis HOM05D005646 ORTHO05D006828 3.1e-11 72.4 118 40.7
AagrBONN_evm.TU.Sc2ySwM_228.261 Anthoceros agrestis HOM05D005646 ORTHO05D006828 6.6e-09 64.7 146 32.2
Cre13.g607900 Chlamydomonas reinhardtii HOM05D005646 ORTHO05D006828 8.6e-09 64.3 127 33.9
TAR053G0001 Trochodendron aralioides HOM05D005646 ORTHO05D006828 2.8e-07 59.3 103 36.9
PGSC0003DMG400000846 Solanum tuberosum HOM05D005646 ORTHO05D006828 3.6e-07 58.9 72 44.4
CBR_g29393 Chara braunii HOM05D005646 ORTHO05D006828 2.3e-06 56.2 59 45.8


User provided reference genes

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