Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G20170 Arabidopsis lyrata HOM05D006216 ORTHO05D007760 9.5e-220 766.5 384 100.0
AT2G26930 Arabidopsis thaliana HOM05D006216 ORTHO05D007760 3.9e-213 744.6 384 96.9
Carub.0004s0743 Capsella rubella HOM05D006216 ORTHO05D007760 2.3e-210 735.3 389 95.1
Sp4g08430 Schrenkiella parvula HOM05D006216 ORTHO05D007760 2.0e-201 705.7 383 93.0
A07p17910 Brassica napus HOM05D006216 ORTHO05D007760 4.6e-198 694.5 384 90.9
BraA07t29509Z Brassica rapa HOM05D006216 ORTHO05D007760 4.6e-198 694.5 384 90.9
CARHR119100 Cardamine hirsuta HOM05D006216 ORTHO05D007760 2.3e-197 692.2 387 90.7
BolC4t23960H Brassica oleracea HOM05D006216 ORTHO05D007760 1.1e-196 689.9 384 89.8
BcaC02g10847 Brassica carinata HOM05D006216 ORTHO05D007760 5.6e-196 687.6 384 89.8
C04p24560 Brassica napus HOM05D006216 ORTHO05D007760 5.6e-196 687.6 384 89.8
Thhalv10002004m.g Eutrema salsugineum HOM05D006216 ORTHO05D007760 8.9e-194 680.2 392 88.0
BcaB02g10053 Brassica carinata HOM05D006216 ORTHO05D007760 1.3e-192 676.4 387 89.1
Aa31LG5G8850 Aethionema arabicum HOM05D006216 ORTHO05D007760 6.0e-182 641.0 438 75.8
THA.LOC104816956 Tarenaya hassleriana HOM05D006216 ORTHO05D007760 1.3e-179 633.3 397 78.6
PGR119G0354 Punica granatum HOM05D006216 ORTHO05D007760 5.6e-164 581.3 353 78.5
QL01p020730 Quercus lobata HOM05D006216 ORTHO05D007760 6.2e-163 577.8 364 75.8
Manes.01G176400 Manihot esculenta HOM05D006216 ORTHO05D007760 2.4e-162 575.9 383 74.4
Gohir.A07G119000 Gossypium hirsutum HOM05D006216 ORTHO05D007760 5.3e-162 574.7 355 77.2
RcHm_v2.0_Chr5g0050131 Rosa chinensis HOM05D006216 ORTHO05D007760 2.0e-161 572.8 363 76.9
Gohir.D07G123300 Gossypium hirsutum HOM05D006216 ORTHO05D007760 3.4e-161 572.0 355 76.9
Ciclev10015579m.g Citrus clementina HOM05D006216 ORTHO05D007760 1.0e-160 570.5 332 81.3
Manes.02G134400 Manihot esculenta HOM05D006216 ORTHO05D007760 2.9e-160 568.9 358 78.2
VMungo1215G0750 Vigna mungo HOM05D006216 ORTHO05D007760 8.4e-160 567.4 367 75.5
MELO3C015605.2 Cucumis melo HOM05D006216 ORTHO05D007760 1.9e-159 566.2 387 72.9
Hma1.2p1_1843F.1_g305010 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 2.5e-159 565.8 369 74.3
CANSAT54G1188 Cannabis sativa HOM05D006216 ORTHO05D007760 3.2e-159 565.5 383 72.3
Lalb_Chr18g0048331 Lupinus albus HOM05D006216 ORTHO05D007760 4.2e-159 565.1 383 72.1
Thecc.09G251000 Theobroma cacao HOM05D006216 ORTHO05D007760 5.5e-159 564.7 331 79.8
Gorai.001G133000 Gossypium raimondii HOM05D006216 ORTHO05D007760 7.1e-159 564.3 358 76.0
MD03G1163100 Malus domestica HOM05D006216 ORTHO05D007760 1.6e-158 563.1 338 79.3
CiPaw.13G146100 Carya illinoinensis HOM05D006216 ORTHO05D007760 2.1e-158 562.8 375 72.5
Sed0006982 Sechium edule HOM05D006216 ORTHO05D007760 2.1e-158 562.8 392 71.9
Actinidia07007 Actinidia chinensis HOM05D006216 ORTHO05D007760 7.9e-158 560.8 363 74.4
Lj6g0023824 Lotus japonicus HOM05D006216 ORTHO05D007760 1.3e-157 560.1 359 75.2
Phvul.006G019500 Phaseolus vulgaris HOM05D006216 ORTHO05D007760 1.3e-157 560.1 368 73.6
Dinv29341 Davidia involucrata HOM05D006216 ORTHO05D007760 1.8e-157 559.7 365 75.1
AUR62024257 Chenopodium quinoa HOM05D006216 ORTHO05D007760 2.3e-157 559.3 375 73.1
Haze_23545 Corylus avellana HOM05D006216 ORTHO05D007760 2.3e-157 559.3 364 73.6
Glyma.13G072700 Glycine max HOM05D006216 ORTHO05D007760 2.3e-157 559.3 347 76.4
Glyma.20G046800 Glycine max HOM05D006216 ORTHO05D007760 2.3e-157 559.3 351 77.2
CsaV3_1G041900 Cucumis sativus L. HOM05D006216 ORTHO05D007760 3.9e-157 558.5 366 74.3
Medtr3g437340 Medicago truncatula HOM05D006216 ORTHO05D007760 5.1e-157 558.1 367 75.2
Ca_13675_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 6.7e-157 557.8 360 74.7
arahy.Tifrunner.gnm1.ann1.G3L2E7 Arachis hypogaea HOM05D006216 ORTHO05D007760 8.7e-157 557.4 362 75.4
Nitab4.5_0002300g0020 Nicotiana tabacum HOM05D006216 ORTHO05D007760 1.1e-156 557.0 330 78.5
Duzib168G1114 Durio zibethinus HOM05D006216 ORTHO05D007760 1.5e-156 556.6 366 75.1
TAR633G2593 Trochodendron aralioides HOM05D006216 ORTHO05D007760 1.9e-156 556.2 368 73.6
CSS0031944 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 2.5e-156 555.8 375 71.5
arahy.Tifrunner.gnm1.ann1.CPM77E Arachis hypogaea HOM05D006216 ORTHO05D007760 3.3e-156 555.4 331 79.5
Cfa010159 Carpinus fangiana HOM05D006216 ORTHO05D007760 3.3e-156 555.4 374 70.9
vmacro04357 Vaccinium macrocarpon HOM05D006216 ORTHO05D007760 3.3e-156 555.4 378 72.2
GSVIVG01037382001 Vitis vinifera HOM05D006216 ORTHO05D007760 3.3e-156 555.4 370 73.2
MSTRG.12426 Avicennia marina HOM05D006216 ORTHO05D007760 4.3e-156 555.1 363 72.2
CSS0004136 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 4.3e-156 555.1 344 77.3
FAN21G1147 Fragaria x ananassa HOM05D006216 ORTHO05D007760 5.7e-156 554.7 353 75.6
TPR.G11861 Trifolium pratense HOM05D006216 ORTHO05D007760 5.7e-156 554.7 365 73.7
FvH4_3g27650 Fragaria vesca HOM05D006216 ORTHO05D007760 1.3e-155 553.5 349 75.6
FAN11G0826 Fragaria x ananassa HOM05D006216 ORTHO05D007760 1.3e-155 553.5 353 75.1
TWI31G0496 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 1.3e-155 553.5 359 74.4
Eucgr.J00662 Eucalyptus grandis HOM05D006216 ORTHO05D007760 1.6e-155 553.1 353 73.9
FAN25G0225 Fragaria x ananassa HOM05D006216 ORTHO05D007760 1.6e-155 553.1 353 75.6
Lj2A825T28 Lonicera japonica HOM05D006216 ORTHO05D007760 3.7e-155 552.0 369 73.7
Solyc01g009010.3 Solanum lycopersicum HOM05D006216 ORTHO05D007760 3.7e-155 552.0 342 75.4
TWI75G0612 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 4.8e-155 551.6 384 70.6
Sopen01g004500 Solanum pennellii HOM05D006216 ORTHO05D007760 1.1e-154 550.4 342 75.1
Psat5g182280 Pisum sativum HOM05D006216 ORTHO05D007760 1.4e-154 550.1 339 76.4
ECA238G2733 Erigeron canadensis HOM05D006216 ORTHO05D007760 1.8e-154 549.7 381 72.4
Potri.001G225100 Populus trichocarpa HOM05D006216 ORTHO05D007760 1.8e-154 549.7 363 74.1
PGSC0003DMG400022703 Solanum tuberosum HOM05D006216 ORTHO05D007760 3.1e-154 548.9 342 75.4
CAN.G714.2 Capsicum annuum HOM05D006216 ORTHO05D007760 6.9e-154 547.7 340 75.6
Potri.009G021800 Populus trichocarpa HOM05D006216 ORTHO05D007760 6.9e-154 547.7 359 74.4
SalBow6G4438 Salvia bowleyana HOM05D006216 ORTHO05D007760 1.2e-153 547.0 397 69.0
Cc01_g07140 Coffea canephora HOM05D006216 ORTHO05D007760 2.6e-153 545.8 353 73.7
Migut.D00703 Erythranthe guttata HOM05D006216 ORTHO05D007760 3.4e-153 545.4 377 71.1
PSO339G5720 Papaver somniferum HOM05D006216 ORTHO05D007760 3.4e-153 545.4 341 76.2
Sc04g0009550 Simmondsia chinensis HOM05D006216 ORTHO05D007760 3.4e-153 545.4 374 70.3
Peaxi162Scf00050g02022 Petunia axillaris HOM05D006216 ORTHO05D007760 4.5e-153 545.0 350 74.6
Lsat_1_v5_gn_2_36221 Lactuca sativa HOM05D006216 ORTHO05D007760 5.9e-153 544.7 368 72.6
Lalb_Chr15g0080191 Lupinus albus HOM05D006216 ORTHO05D007760 7.6e-153 544.3 382 70.7
PSO384G3582 Papaver somniferum HOM05D006216 ORTHO05D007760 3.8e-152 542.0 341 75.4
Hund25392 Selenicereus undatus HOM05D006216 ORTHO05D007760 6.5e-152 541.2 361 72.3
AUR62005484 Chenopodium quinoa HOM05D006216 ORTHO05D007760 1.9e-151 539.7 363 72.2
HanXRQChr14g0433421 Helianthus annuus HOM05D006216 ORTHO05D007760 2.5e-151 539.3 337 75.7
Zm00001eb150630 Zea mays HOM05D006216 ORTHO05D007760 4.2e-151 538.5 343 74.6
Nn7g37015 Nelumbo nucifera HOM05D006216 ORTHO05D007760 1.6e-150 536.6 353 73.4
Sabra16G0133700 Salix brachista HOM05D006216 ORTHO05D007760 3.5e-150 535.4 429 64.3
ClCG03G014320 Citrullus lanatus HOM05D006216 ORTHO05D007760 1.5e-148 530.0 366 71.9
Rhsim13G0202500 Rhododendron simsii HOM05D006216 ORTHO05D007760 1.5e-148 530.0 370 71.6
Aqoxy1G00047 Aquilegia oxysepala HOM05D006216 ORTHO05D007760 1.9e-148 529.6 333 74.8
MSTRG.21323 Avicennia marina HOM05D006216 ORTHO05D007760 1.3e-147 526.9 360 71.4
Os01g0802100 Oryza sativa ssp. japonica HOM05D006216 ORTHO05D007760 2.2e-147 526.2 362 70.7
SGA_v2.0_scaffold79G25547 Striga asiatica HOM05D006216 ORTHO05D007760 1.4e-146 523.5 403 66.0
ATR0782G058 Amborella trichopoda HOM05D006216 ORTHO05D007760 1.3e-144 516.9 333 71.8
CDE08G0663 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 5.0e-144 515.0 305 79.3
Atru.BG.104.p Acer truncatum HOM05D006216 ORTHO05D007760 7.9e-142 507.7 299 80.6
CDE09G0516 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 3.3e-140 502.3 334 74.0
EL10Ac6g13846 Beta vulgaris HOM05D006216 ORTHO05D007760 3.7e-139 498.8 393 64.4
Migut.N02401 Erythranthe guttata HOM05D006216 ORTHO05D007760 8.5e-136 487.6 305 75.4
Nitab4.5_0000428g0050 Nicotiana tabacum HOM05D006216 ORTHO05D007760 3.6e-134 482.3 334 70.4
HPP92_001661 Vanilla planifolia HOM05D006216 ORTHO05D007760 7.9e-134 481.1 394 62.4
DCAR_006327 Daucus carota HOM05D006216 ORTHO05D007760 1.4e-133 480.3 368 66.3
Atru.chr3.2830 Acer truncatum HOM05D006216 ORTHO05D007760 5.1e-133 478.4 318 74.2
unitig_27.g25131 Utricularia gibba HOM05D006216 ORTHO05D007760 5.7e-132 474.9 303 73.9
Pp3c26_490 Physcomitrium patens HOM05D006216 ORTHO05D007760 3.7e-131 472.2 324 65.4
Mapoly0033s0031 Marchantia polymorpha HOM05D006216 ORTHO05D007760 1.0e-125 454.1 358 62.8
SMO367G1046 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 3.0e-125 452.6 323 66.3
CBR_g22270 Chara braunii HOM05D006216 ORTHO05D007760 3.2e-119 432.6 336 61.6
Hma1.2p1_1843F.1_g305000 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 1.4e-117 427.2 273 75.8
MBI19_g37419_MAGBIO Magnolia biondii HOM05D006216 ORTHO05D007760 5.5e-111 405.2 333 61.6
AagrBONN_evm.TU.Sc2ySwM_228.3849 Anthoceros agrestis HOM05D006216 ORTHO05D007760 3.0e-109 399.4 285 66.3
Prupe.4G269400 Prunus persica HOM05D006216 ORTHO05D007760 7.0e-106 388.3 259 76.8
MCO08G209 Micromonas commoda HOM05D006216 ORTHO05D007760 6.6e-88 328.6 296 54.4
Cre02.g145050 Chlamydomonas reinhardtii HOM05D006216 ORTHO05D007760 2.6e-84 316.6 294 52.7
PRCOL_00004294 Prasinoderma coloniale HOM05D006216 ORTHO05D007760 4.6e-81 305.8 303 49.5
Sabra09G0013700 Salix brachista HOM05D006216 ORTHO05D007760 4.7e-78 295.8 291 55.3
SEGI_15556 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 9.2e-74 281.6 182 74.2
Glyma.17G179800 Glycine max HOM05D006216 ORTHO05D007760 1.3e-64 251.1 181 70.7
Hund17544 Selenicereus undatus HOM05D006216 ORTHO05D007760 1.4e-50 204.5 180 57.2
SEGI_04634 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 1.5e-47 194.5 130 64.6
FAN26G0546 Fragaria x ananassa HOM05D006216 ORTHO05D010609 3.5e-41 173.3 132 68.9
SMO332G0003 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 2.1e-33 147.5 102 68.6
SMO332G0042 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 1.1e-23 115.2 115 50.4
Ca_29165_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 4.1e-21 106.7 161 38.5
Oeu063625.1 Olea europaea HOM05D006216 ORTHO05D007760 2.0e-20 104.4 64 71.9
SMO198G0007 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 1.1e-18 98.6 106 50.0
Hund00952 Selenicereus undatus HOM05D006216 ORTHO05D007760 1.0e-16 92.0 74 58.1
DCAR_006325 Daucus carota HOM05D006216 ORTHO05D007760 3.3e-15 87.0 55 67.3


User provided reference genes

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