Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G19680 Arabidopsis lyrata HOM05D005825 ORTHO05D006483 2.6e-178 628.6 320 100.0
AT2G26680 Arabidopsis thaliana HOM05D005825 ORTHO05D006483 1.6e-172 609.4 320 96.2
Carub.0004s0696 Capsella rubella HOM05D005825 ORTHO05D006483 5.4e-168 594.3 320 94.4
Sp4g09150 Schrenkiella parvula HOM05D005825 ORTHO05D006483 3.0e-163 578.6 320 91.6
Thhalv10002044m.g Eutrema salsugineum HOM05D005825 ORTHO05D006483 1.2e-159 566.6 320 90.3
A04p21320 Brassica napus HOM05D005825 ORTHO05D006483 5.8e-154 547.7 323 87.6
BraA04t17698Z Brassica rapa HOM05D005825 ORTHO05D006483 5.8e-154 547.7 323 87.6
BcaB06g28186 Brassica carinata HOM05D005825 ORTHO05D006483 3.2e-152 542.0 321 86.3
Aa31LG5G9110 Aethionema arabicum HOM05D003776 ORTHO05D004459 1.2e-151 540.0 322 83.9
C04p57230 Brassica napus HOM05D005825 ORTHO05D006483 1.7e-150 536.2 325 85.8
Thhalv10023596m.g Eutrema salsugineum HOM05D005825 ORTHO05D006483 1.1e-149 533.5 320 85.6
BolC4t27250H Brassica oleracea HOM05D005825 ORTHO05D006483 2.8e-148 528.9 325 84.0
BcaC02g08209 Brassica carinata HOM05D005825 ORTHO05D006483 2.3e-147 525.8 326 83.4
THA.LOC104815280 Tarenaya hassleriana HOM05D005825 ORTHO05D006483 7.3e-141 504.2 325 77.5
Cpa.g.sc75.29 Carica papaya HOM05D005825 ORTHO05D006483 2.0e-138 496.1 323 77.1
Duzib168G1077 Durio zibethinus HOM05D005825 ORTHO05D006483 6.4e-129 464.5 332 72.3
Sed0008025 Sechium edule HOM05D005825 ORTHO05D006483 6.4e-129 464.5 324 74.7
CANSAT11G1244 Cannabis sativa HOM05D005825 ORTHO05D006483 8.4e-129 464.2 323 70.9
MELO3C004508.2 Cucumis melo HOM05D005825 ORTHO05D006483 1.9e-128 463.0 321 73.8
Ciclev10008932m.g Citrus clementina HOM05D005825 ORTHO05D006483 1.2e-127 460.3 323 71.8
ClCG11G003030 Citrullus lanatus HOM05D005825 ORTHO05D006483 2.1e-127 459.5 321 73.8
Sabra14G0011800 Salix brachista HOM05D005825 ORTHO05D006483 2.1e-127 459.5 320 73.8
Gorai.010G064100 Gossypium raimondii HOM05D005825 ORTHO05D006483 4.6e-127 458.4 327 72.5
Thecc.09G126400 Theobroma cacao HOM05D005825 ORTHO05D006483 7.8e-127 457.6 326 71.8
EL10Ac8g18654 Beta vulgaris HOM05D005825 ORTHO05D006483 1.3e-126 456.8 324 72.8
TWI34G0282 Tripterygium wilfordii HOM05D005825 ORTHO05D006483 1.3e-126 456.8 328 71.3
CsaV3_2G002850 Cucumis sativus L. HOM05D005825 ORTHO05D006483 1.7e-126 456.4 321 73.2
Sabra02G0094300 Salix brachista HOM05D005825 ORTHO05D006483 1.7e-126 456.4 322 73.3
Gohir.D06G054601 Gossypium hirsutum HOM05D005825 ORTHO05D006483 6.6e-126 454.5 327 71.6
Potri.014G017900 Populus trichocarpa HOM05D005825 ORTHO05D006483 6.6e-126 454.5 322 72.4
Hund09127 Selenicereus undatus HOM05D005825 ORTHO05D006483 1.1e-125 453.8 326 70.6
vmacro20556 Vaccinium macrocarpon HOM05D005825 ORTHO05D006483 1.9e-125 453.0 319 71.8
Atru.chr7.1162 Acer truncatum HOM05D005825 ORTHO05D006483 3.3e-125 452.2 327 71.9
Dinv36528 Davidia involucrata HOM05D005825 ORTHO05D006483 2.8e-124 449.1 323 69.7
Cfa003372 Carpinus fangiana HOM05D005825 ORTHO05D006483 6.2e-124 448.0 320 70.0
Gohir.A06G056101 Gossypium hirsutum HOM05D005825 ORTHO05D006483 1.4e-123 446.8 334 70.1
MBI16_g24711_MAGBIO Magnolia biondii HOM05D005825 ORTHO05D006483 1.8e-123 446.4 320 69.7
PGR142G1018 Punica granatum HOM05D005825 ORTHO05D006483 6.9e-123 444.5 326 69.0
Rhsim01G0070600 Rhododendron simsii HOM05D005825 ORTHO05D006483 6.9e-123 444.5 321 69.8
Manes.06G058801 Manihot esculenta HOM05D005825 ORTHO05D006483 1.2e-122 443.7 329 68.7
Oeu007499.1 Olea europaea HOM05D005825 ORTHO05D006483 3.4e-122 442.2 330 68.5
CiPaw.03G244100 Carya illinoinensis HOM05D005825 ORTHO05D006483 4.5e-122 441.8 320 70.0
MD02G1032800 Malus domestica HOM05D005825 ORTHO05D006483 1.3e-121 440.3 322 69.3
Ca_21683_v3 Cicer arietinum L. HOM05D005825 ORTHO05D006483 3.8e-121 438.7 325 68.0
FAN23G1198 Fragaria x ananassa HOM05D005825 ORTHO05D006483 4.9e-121 438.3 323 70.6
Lalb_Chr13g0301881 Lupinus albus HOM05D005825 ORTHO05D006483 4.9e-121 438.3 326 67.8
Aqoxy5G01398 Aquilegia oxysepala HOM05D005825 ORTHO05D006483 6.4e-121 438.0 321 69.2
CSS0017066 Camellia sinensis var. sinensis HOM05D005825 ORTHO05D006483 6.4e-121 438.0 322 68.6
FAN19G0135 Fragaria x ananassa HOM05D005825 ORTHO05D006483 6.4e-121 438.0 323 70.3
DCAR_009187 Daucus carota HOM05D005825 ORTHO05D006483 8.4e-121 437.6 324 69.1
Migut.B01717 Erythranthe guttata HOM05D005825 ORTHO05D006483 8.4e-121 437.6 327 68.2
Nn2g12789 Nelumbo nucifera HOM05D005825 ORTHO05D006483 8.4e-121 437.6 328 68.0
Sc08g0006620 Simmondsia chinensis HOM05D005825 ORTHO05D006483 8.4e-121 437.6 333 67.0
Solyc12g009430.2 Solanum lycopersicum HOM05D005825 ORTHO05D006483 8.4e-121 437.6 323 69.0
FvH4_1g03280 Fragaria vesca HOM05D005825 ORTHO05D006483 1.1e-120 437.2 323 70.0
Peaxi162Scf00157g01524 Petunia axillaris HOM05D005825 ORTHO05D006483 1.1e-120 437.2 320 69.4
Sopen12g004430 Solanum pennellii HOM05D005825 ORTHO05D006483 1.1e-120 437.2 323 68.7
Actinidia40470 Actinidia chinensis HOM05D005825 ORTHO05D006483 1.9e-120 436.4 322 68.9
FAN26G2420 Fragaria x ananassa HOM05D005825 ORTHO05D006483 4.2e-120 435.3 323 70.0
Glyma.13G167400 Glycine max HOM05D005825 ORTHO05D006483 4.2e-120 435.3 325 67.1
CSS0027185 Camellia sinensis var. sinensis HOM05D005825 ORTHO05D006483 7.1e-120 434.5 322 68.3
CAN.G1591.11 Capsicum annuum HOM05D005825 ORTHO05D006483 7.1e-120 434.5 320 68.8
TAR625G0074 Trochodendron aralioides HOM05D005825 ORTHO05D006483 9.3e-120 434.1 327 69.7
Lj2C942T8 Lonicera japonica HOM05D005825 ORTHO05D006483 1.2e-119 433.7 349 65.9
Medtr4g114160 Medicago truncatula HOM05D005825 ORTHO05D006483 1.2e-119 433.7 325 67.7
Psat4g040200 Pisum sativum HOM05D005825 ORTHO05D006483 1.6e-119 433.3 323 67.8
MSTRG.19597 Avicennia marina HOM05D005825 ORTHO05D006483 2.1e-119 433.0 321 67.6
Rhsim01G0071200 Rhododendron simsii HOM05D005825 ORTHO05D006483 2.1e-119 433.0 329 67.5
PSO675G5818 Papaver somniferum HOM05D005825 ORTHO05D006483 3.5e-119 432.2 328 68.3
Phvul.003G164300 Phaseolus vulgaris HOM05D005825 ORTHO05D006483 4.6e-119 431.8 325 66.5
Lalb_Chr12g0197941 Lupinus albus HOM05D005825 ORTHO05D006483 6.0e-119 431.4 319 67.4
RcHm_v2.0_Chr2g0088431 Rosa chinensis HOM05D005825 ORTHO05D006483 6.0e-119 431.4 332 68.4
Ah.09g226210 Amaranthus hybridus HOM05D005825 ORTHO05D006483 7.9e-119 431.0 326 66.6
FAN28G2006 Fragaria x ananassa HOM05D005825 ORTHO05D006483 1.0e-118 430.6 323 70.0
AUR62013360 Chenopodium quinoa HOM05D005825 ORTHO05D006483 3.0e-118 429.1 263 78.3
Lj4g0013357 Lotus japonicus HOM05D005825 ORTHO05D006483 3.0e-118 429.1 322 66.5
PSO782G3266 Papaver somniferum HOM05D005825 ORTHO05D006483 3.0e-118 429.1 326 68.1
Hma1.2p1_0018F.1_g012420 Hydrangea macrophylla HOM05D005825 ORTHO05D006483 3.9e-118 428.7 318 67.9
Prupe.7G242700 Prunus persica HOM05D005825 ORTHO05D006483 3.9e-118 428.7 325 67.4
Hma1.2p1_2368F.1_g320700 Hydrangea macrophylla HOM05D005825 ORTHO05D006483 8.7e-118 427.6 318 67.6
Lsat_1_v5_gn_8_58680 Lactuca sativa HOM05D005825 ORTHO05D006483 1.5e-117 426.8 323 65.3
arahy.Tifrunner.gnm1.ann1.1NB5KJ Arachis hypogaea HOM05D005825 ORTHO05D006483 1.9e-117 426.4 323 65.3
arahy.Tifrunner.gnm1.ann1.9UEQ51 Arachis hypogaea HOM05D005825 ORTHO05D006483 3.3e-117 425.6 327 64.8
SalBow3G4290 Salvia bowleyana HOM05D005825 ORTHO05D006483 5.6e-117 424.9 321 66.0
VMungo1215G3451 Vigna mungo HOM05D005825 ORTHO05D006483 5.6e-117 424.9 324 65.4
Lj2A929T15 Lonicera japonica HOM05D005825 ORTHO05D006483 3.6e-116 422.2 348 65.5
DCAR_017816 Daucus carota HOM05D005825 ORTHO05D006483 2.4e-115 419.5 361 62.3
Eucgr.C01173 Eucalyptus grandis HOM05D005825 ORTHO05D006483 2.4e-115 419.5 326 66.3
SGA_v2.0_scaffold299G47720 Striga asiatica HOM05D005825 ORTHO05D006483 1.5e-114 416.8 318 65.7
arahy.Tifrunner.gnm1.ann1.85XGXJ Arachis hypogaea HOM05D005825 ORTHO05D006483 5.8e-114 414.8 322 63.0
PGSC0003DMG400002918 Solanum tuberosum HOM05D005825 ORTHO05D006483 9.9e-114 414.1 320 66.2
arahy.Tifrunner.gnm1.ann1.R6UVTB Arachis hypogaea HOM05D005825 ORTHO05D006483 3.8e-113 412.1 322 62.7
unitig_748.g8100 Utricularia gibba HOM05D005825 ORTHO05D006483 3.8e-113 412.1 324 65.7
Nitab4.5_0014105g0010 Nicotiana tabacum HOM05D005825 ORTHO05D006483 4.9e-113 411.8 319 66.5
CDE04G1080 Ceratophyllum demersum HOM05D005825 ORTHO05D006483 2.4e-112 409.5 332 64.2
Nitab4.5_0002658g0050 Nicotiana tabacum HOM05D005825 ORTHO05D006483 2.1e-111 406.4 320 65.6
HanXRQChr17g0537731 Helianthus annuus HOM05D005825 ORTHO05D006483 4.6e-111 405.2 318 65.1
HanXRQChr17g0537711 Helianthus annuus HOM05D005825 ORTHO05D006483 4.3e-109 398.7 319 64.3
HPP92_017605 Vanilla planifolia HOM05D005825 ORTHO05D006483 7.4e-109 397.9 331 62.8
ATR0225G021 Amborella trichopoda HOM05D005825 ORTHO05D006483 1.5e-106 390.2 265 73.2
Haze_25579 Corylus avellana HOM05D005825 ORTHO05D006483 7.6e-106 387.9 312 65.4
SHI03392 Sapria himalayana HOM05D005825 ORTHO05D006483 7.6e-106 387.9 387 54.5
QL10p023454 Quercus lobata HOM05D005825 ORTHO05D006483 1.0e-105 387.5 499 46.3
AUR62011128 Chenopodium quinoa HOM05D005825 ORTHO05D006483 2.1e-103 379.8 324 63.3
Zm00001eb043030 Zea mays HOM05D005825 ORTHO05D006483 8.7e-102 374.4 269 67.7
Os03g0566600 Oryza sativa ssp. japonica HOM05D005825 ORTHO05D006483 4.8e-100 368.6 264 67.0
HanXRQChr06g0180341 Helianthus annuus HOM05D005825 ORTHO05D006483 9.0e-99 364.4 285 64.2
CARHR118580 Cardamine hirsuta HOM05D005825 ORTHO05D006483 2.1e-95 353.2 201 87.1
Potri.002G119800 Populus trichocarpa HOM05D005825 ORTHO05D006483 8.2e-84 314.7 189 83.6
AagrBONN_evm.TU.Sc2ySwM_344.1792 Anthoceros agrestis HOM05D005825 ORTHO05D006483 2.9e-81 306.2 264 56.4
ECA246G2031 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.1e-80 304.3 199 75.9
SMO147G0115 Selaginella moellendorffii HOM05D005825 ORTHO05D006483 3.0e-78 296.2 261 54.8
TPR.G10697 Trifolium pratense HOM05D005825 ORTHO05D006483 3.9e-78 295.8 183 78.7
CiPaw.04G171000 Carya illinoinensis HOM05D005825 ORTHO05D006483 4.1e-75 285.8 175 78.9
GSVIVG01015529001 Vitis vinifera HOM05D005825 ORTHO05D006483 6.5e-73 278.5 168 80.4
Glyma.17G115000 Glycine max HOM05D005825 ORTHO05D006483 8.5e-73 278.1 176 76.7
Cc06_g08520 Coffea canephora HOM05D005825 ORTHO05D006483 4.2e-72 275.8 167 79.6
CARHR118590 Cardamine hirsuta HOM05D005825 ORTHO05D006483 6.5e-57 225.3 121 93.4
Ca_13270_v3 Cicer arietinum L. HOM05D005825 ORTHO05D006483 3.7e-52 209.5 182 61.5
Actinidia21988 Actinidia chinensis HOM05D005825 ORTHO05D006483 7.8e-50 201.8 124 79.0
Ca_14592_v3 Cicer arietinum L. HOM05D005825 ORTHO05D006483 3.6e-47 193.0 217 52.5
Eucgr.G00617 Eucalyptus grandis HOM05D005825 ORTHO05D006483 2.0e-45 187.2 118 78.0
Eucgr.B02426 Eucalyptus grandis HOM05D005825 ORTHO05D006483 5.7e-45 185.7 118 77.1
VMungo0647G0470 Vigna mungo HOM05D005825 ORTHO05D006483 2.2e-44 183.7 162 53.1
Eucgr.C03225 Eucalyptus grandis HOM05D005825 ORTHO05D006483 1.6e-39 167.5 112 72.3
TAR381G0761 Trochodendron aralioides HOM05D005825 ORTHO05D006483 1.7e-36 157.5 154 58.4
Eucgr.E01840 Eucalyptus grandis HOM05D005825 ORTHO05D006483 4.6e-34 149.4 118 66.9
Eucgr.B02447 Eucalyptus grandis HOM05D005825 ORTHO05D006483 5.0e-33 146.0 95 76.8
CAN.G204.2 Capsicum annuum HOM05D005825 ORTHO05D006483 7.1e-19 99.0 73 65.8
SalBow6G2945 Salvia bowleyana HOM05D000060 ORTHO05D000082 1.9e-11 74.3 137 38.7
Zm00001eb219900 Zea mays HOM05D005825 ORTHO05D006483 4.2e-11 73.2 164 32.3
VMungo0464G1687 Vigna mungo HOM05D005825 ORTHO05D006483 5.4e-11 72.8 55 65.5
MCO17G084 Micromonas commoda HOM05D051517 ORTHO05D006483 1.6e-10 71.2 186 26.9
Cre02.g103000 Chlamydomonas reinhardtii HOM05D024924 ORTHO05D006483 1.7e-09 67.8 144 34.7
Cre12.g488550 Chlamydomonas reinhardtii HOM05D024924 ORTHO05D006483 4.3e-08 63.2 148 31.1
vmacro22117 Vaccinium macrocarpon HOM05D003776 ORTHO05D004459 3.6e-07 60.1 52 65.4
Cre09.g386756 Chlamydomonas reinhardtii HOM05D005825 ORTHO05D006483 8.1e-07 58.9 178 29.2
Pp3c12_8840 Physcomitrium patens HOM05D005825 ORTHO05D006483 1.8e-06 57.8 157 30.6
MCO17G075 Micromonas commoda HOM05D051517 ORTHO05D006483 3.1e-06 57.0 188 24.5


User provided reference genes

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