Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G18490 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 2.5e-92 342.0 168 100.0
CARHR116870 Cardamine hirsuta HOM05D003869 ORTHO05D004718 5.1e-45 184.9 262 44.7
Carub.0004s0353 Capsella rubella HOM05D003869 ORTHO05D004718 2.2e-40 169.5 259 42.1
AL4G14520 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 6.5e-40 167.9 246 43.5
Carub.0004s0433 Capsella rubella HOM05D003869 ORTHO05D004718 1.1e-39 167.2 260 43.1
AL4G18540 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 7.2e-39 164.5 262 42.0
AT1G64840 Arabidopsis thaliana HOM05D003869 ORTHO05D004718 3.0e-37 159.1 263 41.1
AL4G18500 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 4.0e-37 158.7 260 40.4
Carub.0004s0429 Capsella rubella HOM05D003869 ORTHO05D004718 1.5e-36 156.8 262 39.7
Carub.0004s0430 Capsella rubella HOM05D003869 ORTHO05D004718 3.3e-36 155.6 253 40.7
AL4G18560 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 4.4e-36 155.2 255 41.2
AL4G15530 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 2.8e-35 152.5 254 40.9
AL4G15500 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 4.8e-35 151.8 266 39.1
Carub.0004s0432 Capsella rubella HOM05D003869 ORTHO05D004718 4.8e-35 151.8 261 37.5
Carub.0004s0420 Capsella rubella HOM05D003869 ORTHO05D004718 1.1e-34 150.6 262 38.9
AL4G15660 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 1.4e-34 150.2 257 40.9
AL4G18510 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 1.4e-34 150.2 257 42.4
Thhalv10000198m.g Eutrema salsugineum HOM05D003869 ORTHO05D004718 1.4e-34 150.2 262 39.7
Carub.0004s0426 Capsella rubella HOM05D003869 ORTHO05D004718 3.1e-34 149.1 257 41.2
AL4G15620 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 4.1e-34 148.7 263 41.4
CARHR116990 Cardamine hirsuta HOM05D003869 ORTHO05D004718 5.3e-34 148.3 258 39.1
AL4G18480 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 7.0e-34 147.9 255 38.8
Carub.0004s0422 Capsella rubella HOM05D003869 ORTHO05D004718 7.0e-34 147.9 262 37.8
AL4G14510 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 3.5e-33 145.6 251 41.4
AT2G24250 Arabidopsis thaliana HOM05D003869 ORTHO05D004718 5.9e-33 144.8 248 38.7
CARHR118620 Cardamine hirsuta HOM05D003869 ORTHO05D004718 7.7e-33 144.4 242 40.9
AL4G18550 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 1.3e-32 143.7 261 39.8
Thhalv10000166m.g Eutrema salsugineum HOM05D003869 ORTHO05D004718 1.3e-32 143.7 265 38.5
BcaB06g28007 Brassica carinata HOM05D003869 ORTHO05D004718 4.2e-31 138.7 259 38.2
Carub.0004s0354 Capsella rubella HOM05D003869 ORTHO05D004718 9.4e-31 137.5 243 37.4
Thhalv10000199m.g Eutrema salsugineum HOM05D003869 ORTHO05D004718 2.7e-30 136.0 264 38.3
AL4G19670 Arabidopsis lyrata HOM05D000888 ORTHO05D000740 3.6e-30 135.6 186 43.5
A04p18490 Brassica napus HOM05D003869 ORTHO05D004718 8.0e-30 134.4 203 43.3
Carub.0004s0427 Capsella rubella HOM05D003869 ORTHO05D004718 8.0e-30 134.4 265 38.1
BcaB06g28005 Brassica carinata HOM05D003869 ORTHO05D004718 1.4e-29 133.7 235 39.1
Thhalv10000460m.g Eutrema salsugineum HOM05D003869 ORTHO05D004718 1.8e-29 133.3 225 38.2
BcaB06g28002 Brassica carinata HOM05D003869 ORTHO05D004718 3.0e-29 132.5 262 34.7
A04p19090 Brassica napus HOM05D003869 ORTHO05D004718 4.0e-29 132.1 260 36.2
BcaC02g08489 Brassica carinata HOM05D003869 ORTHO05D004718 6.8e-29 131.3 263 36.5
C04p53760 Brassica napus HOM05D003869 ORTHO05D004718 6.8e-29 131.3 263 36.5
C04p54420 Brassica napus HOM05D003869 ORTHO05D004718 8.8e-29 131.0 252 36.1
A04p19070 Brassica napus HOM05D003869 ORTHO05D004718 1.5e-28 130.2 263 34.6
BraA04t17507Z Brassica rapa HOM05D003869 ORTHO05D004718 2.0e-28 129.8 254 36.2
Carub.0004s0423 Capsella rubella HOM05D003869 ORTHO05D004718 2.0e-28 129.8 266 36.5
CARHR117020 Cardamine hirsuta HOM05D003869 ORTHO05D004718 2.0e-28 129.8 261 36.0
BcaB06g27998 Brassica carinata HOM05D003869 ORTHO05D004718 3.4e-28 129.0 252 34.5
BcaC02g08422 Brassica carinata HOM05D003869 ORTHO05D004718 3.4e-28 129.0 261 35.2
C04p54410 Brassica napus HOM05D003869 ORTHO05D004718 3.4e-28 129.0 261 35.2
BraA04t17506Z Brassica rapa HOM05D003869 ORTHO05D004718 4.4e-28 128.6 263 34.2
BolC4t26931H Brassica oleracea HOM05D003869 ORTHO05D004718 7.5e-28 127.9 263 36.1
BolC4t26987H Brassica oleracea HOM05D003869 ORTHO05D004718 9.8e-28 127.5 261 34.9
Sp4g03230 Schrenkiella parvula HOM05D003869 ORTHO05D004718 1.3e-27 127.1 260 36.5
BcaC02g08419 Brassica carinata HOM05D003869 ORTHO05D004718 3.7e-27 125.6 262 34.4
C04p54430 Brassica napus HOM05D003869 ORTHO05D004718 3.7e-27 125.6 262 33.2
BolC4t26992H Brassica oleracea HOM05D003869 ORTHO05D004718 3.7e-27 125.6 262 34.4
BcaB01g02713 Brassica carinata HOM05D003869 ORTHO05D004718 4.8e-27 125.2 257 35.8
C04p54500 Brassica napus HOM05D003869 ORTHO05D004718 5.4e-26 121.7 247 36.4
BolC4t26933H Brassica oleracea HOM05D003869 ORTHO05D004718 5.4e-26 121.7 262 36.3
Sp4g03220 Schrenkiella parvula HOM05D003869 ORTHO05D004718 5.4e-26 121.7 252 35.7
AL4G15555 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 7.0e-26 121.3 172 44.2
A04p19110 Brassica napus HOM05D003869 ORTHO05D004718 9.1e-26 120.9 263 36.5
BraA04t17509Z Brassica rapa HOM05D003869 ORTHO05D004718 9.1e-26 120.9 263 36.5
A04p19130 Brassica napus HOM05D003869 ORTHO05D004718 2.0e-25 119.8 268 35.8
Carub.0004s0352 Capsella rubella HOM05D003869 ORTHO05D004718 4.5e-25 118.6 179 40.8
A04p19140 Brassica napus HOM05D003869 ORTHO05D004718 5.9e-25 118.2 268 35.4
BolC4t26993H Brassica oleracea HOM05D003869 ORTHO05D004718 5.9e-25 118.2 276 34.8
BraA04t17514Z Brassica rapa HOM05D003869 ORTHO05D004718 5.9e-25 118.2 268 35.4
A04p19120 Brassica napus HOM05D003869 ORTHO05D004718 7.7e-25 117.9 248 35.1
C04p54520 Brassica napus HOM05D003869 ORTHO05D004718 1.0e-24 117.5 268 35.1
BcaC02g08418 Brassica carinata HOM05D003869 ORTHO05D004718 1.7e-24 116.7 263 36.1
BolC4t26932H Brassica oleracea HOM05D003869 ORTHO05D004718 3.8e-24 115.5 262 35.5
BcaC02g08414 Brassica carinata HOM05D003869 ORTHO05D004718 8.5e-24 114.4 268 34.7
BcaC02g08420 Brassica carinata HOM05D003869 ORTHO05D004718 8.5e-24 114.4 265 32.8
A04p18510 Brassica napus HOM05D003869 ORTHO05D004718 8.5e-24 114.4 186 43.0
BolC4t26995H Brassica oleracea HOM05D003869 ORTHO05D004718 8.5e-24 114.4 268 34.7
BcaC02g08416 Brassica carinata HOM05D003869 ORTHO05D004718 1.1e-23 114.0 221 37.6
BcaB01g02998 Brassica carinata HOM05D003869 ORTHO05D004718 3.6e-22 109.0 234 33.3
A04p19100 Brassica napus HOM05D003869 ORTHO05D004718 6.1e-22 108.2 194 35.1
BcaC02g08487 Brassica carinata HOM05D003869 ORTHO05D004718 8.0e-22 107.8 191 41.4
C04p53780 Brassica napus HOM05D003869 ORTHO05D004718 8.0e-22 107.8 89 61.8
BraA04t17463Z Brassica rapa HOM05D003869 ORTHO05D004718 1.8e-21 106.7 89 62.9
BraA04t17513Z Brassica rapa HOM05D003869 ORTHO05D004718 1.8e-21 106.7 224 36.6
BcaB06g28006 Brassica carinata HOM05D003869 ORTHO05D004718 3.0e-21 105.9 262 33.2
A04p18540 Brassica napus HOM05D003869 ORTHO05D004718 4.0e-21 105.5 89 60.7
BraA04t17462Z Brassica rapa HOM05D003869 ORTHO05D004718 4.0e-21 105.5 89 60.7
BraA04t17464Z Brassica rapa HOM05D003869 ORTHO05D004718 4.0e-21 105.5 89 60.7
AL4G15600 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 8.8e-21 104.4 89 62.9
CARHR116940 Cardamine hirsuta HOM05D003869 ORTHO05D004718 8.8e-21 104.4 265 32.8
C04p54480 Brassica napus HOM05D003869 ORTHO05D004718 5.7e-20 101.7 235 34.0
Sp4g03710 Schrenkiella parvula HOM05D003869 ORTHO05D004718 5.7e-20 101.7 218 33.5
Thhalv10000613m.g Eutrema salsugineum HOM05D003869 ORTHO05D004718 1.7e-19 100.1 229 32.3
Thhalv10000175m.g Eutrema salsugineum HOM05D003869 ORTHO05D004718 8.3e-19 97.8 228 32.9
CARHR116700 Cardamine hirsuta HOM05D003869 ORTHO05D004718 1.8e-18 96.7 89 57.3
BcaC02g08486 Brassica carinata HOM05D003869 ORTHO05D004718 2.4e-18 96.3 89 59.6
AL4G15560 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 3.1e-18 95.9 147 40.1
C03p32370 Brassica napus HOM05D003869 ORTHO05D004718 1.6e-17 93.6 256 31.2
CARHR116980 Cardamine hirsuta HOM05D003869 ORTHO05D004718 2.7e-17 92.8 74 63.5
A03p26980 Brassica napus HOM05D003869 ORTHO05D004718 3.5e-17 92.4 256 30.5
CARHR117030 Cardamine hirsuta HOM05D003869 ORTHO05D004718 7.7e-17 91.3 209 33.5
Carub.0004s0356 Capsella rubella HOM05D003869 ORTHO05D004718 1.0e-16 90.9 78 57.7
BraA03t11909Z Brassica rapa HOM05D003869 ORTHO05D004718 1.3e-16 90.5 256 30.1
CARHR117870 Cardamine hirsuta HOM05D003869 ORTHO05D004718 8.6e-16 87.8 84 54.8
CARHR116880 Cardamine hirsuta HOM05D003869 ORTHO05D004718 5.6e-15 85.1 208 33.2
Thhalv10000675m.g Eutrema salsugineum HOM05D003869 ORTHO05D004718 1.6e-14 83.6 121 43.0
Thhalv10000192m.g Eutrema salsugineum HOM05D003869 ORTHO05D004718 1.0e-13 80.9 200 30.5
Thhalv10019678m.g Eutrema salsugineum HOM05D003869 ORTHO05D004718 4.0e-13 79.0 175 36.0
AL4G14540 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 5.2e-13 78.6 211 31.8
BraA04t17508Z Brassica rapa HOM05D003869 ORTHO05D004718 1.2e-12 77.4 145 30.3
C07p36960 Brassica napus HOM05D003869 ORTHO05D004718 3.4e-12 75.9 255 29.0
BolC7t44209H Brassica oleracea HOM05D003869 ORTHO05D004718 3.4e-12 75.9 255 29.0
A06p40890 Brassica napus HOM05D003869 ORTHO05D004718 5.7e-12 75.1 255 29.0
BraA06t27011Z Brassica rapa HOM05D003869 ORTHO05D004718 5.7e-12 75.1 255 29.0
C04p53770 Brassica napus HOM05D003869 ORTHO05D004718 1.3e-11 73.9 181 34.8
CARHR117890 Cardamine hirsuta HOM05D003869 ORTHO05D004718 1.3e-11 73.9 65 56.9
BcaC06g33784 Brassica carinata HOM05D003869 ORTHO05D004718 2.2e-11 73.2 219 30.1
CARHR117230 Cardamine hirsuta HOM05D003869 ORTHO05D004718 1.1e-10 70.9 118 39.8
CARHR117860 Cardamine hirsuta HOM05D003869 ORTHO05D004718 1.4e-10 70.5 191 31.9
AL4G14530 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 5.4e-10 68.6 111 39.6
AT2G24255 Arabidopsis thaliana HOM05D003869 ORTHO05D004718 1.2e-09 67.4 179 30.7
AL4G18570 Arabidopsis lyrata HOM05D003869 ORTHO05D004718 3.5e-09 65.9 107 38.3
BolC4t26990H Brassica oleracea HOM05D003869 ORTHO05D004718 1.7e-08 63.5 198 27.8
BcaB06g28001 Brassica carinata HOM05D003869 ORTHO05D004718 8.6e-08 61.2 72 45.8
CARHR116960 Cardamine hirsuta HOM05D003869 ORTHO05D004718 5.6e-07 58.5 78 43.6
CARHR116720 Cardamine hirsuta HOM05D003869 ORTHO05D004718 1.6e-06 57.0 100 39.0


User provided reference genes

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