Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G17620 Arabidopsis lyrata HOM05D009534 ORTHO05D011691 7.9e-120 433.7 208 100.0
AL4G18080 Arabidopsis lyrata HOM05D009534 ORTHO05D011691 4.1e-84 315.1 209 69.9
AL6G37460 Arabidopsis lyrata HOM05D009534 ORTHO05D011691 9.2e-60 234.2 209 56.5
AL4G20220 Arabidopsis lyrata HOM05D009534 ORTHO05D011691 5.9e-59 231.5 121 94.2
AL1G53800 Arabidopsis lyrata HOM05D009534 ORTHO05D011691 3.9e-50 202.2 136 73.5
Carub.0005s0343 Capsella rubella HOM05D009534 ORTHO05D011691 7.3e-49 198.0 208 44.7
Carub.0025s0006 Capsella rubella HOM05D009534 ORTHO05D011691 1.1e-47 194.1 196 46.4
AL3G44900 Arabidopsis lyrata HOM05D009534 ORTHO05D011691 4.4e-46 188.7 207 45.4
AL4G20200 Arabidopsis lyrata HOM05D009534 ORTHO05D011691 7.5e-46 188.0 194 49.5
AL3G44720 Arabidopsis lyrata HOM05D009534 ORTHO05D011691 9.8e-46 187.6 209 44.5
AL5G20680 Arabidopsis lyrata HOM05D009534 ORTHO05D011691 3.0e-42 176.0 207 44.0
AL6G42170 Arabidopsis lyrata HOM05D009534 ORTHO05D011691 4.7e-40 168.7 174 50.0
AL5G19210 Arabidopsis lyrata HOM05D009534 ORTHO05D011691 6.2e-40 168.3 86 94.2
AL8G29350 Arabidopsis lyrata HOM05D009534 ORTHO05D011691 2.3e-39 166.4 209 38.8
AL8G19950 Arabidopsis lyrata HOM05D009534 ORTHO05D011691 3.2e-36 156.0 209 34.9
AL3G42090 Arabidopsis lyrata HOM05D009534 ORTHO05D011691 1.6e-35 153.7 209 34.9
AL6G40200 Arabidopsis lyrata HOM05D009534 ORTHO05D011691 1.0e-34 151.0 202 35.1
AL89U10020 Arabidopsis lyrata HOM05D009534 ORTHO05D011691 2.5e-33 146.4 199 36.2
AL4G30830 Arabidopsis lyrata HOM05D009534 ORTHO05D011691 3.8e-21 105.9 210 31.4
AL6G37470 Arabidopsis lyrata HOM05D009534 ORTHO05D011691 2.7e-19 99.8 128 37.5
AL3G45330 Arabidopsis lyrata HOM05D009534 ORTHO05D011691 5.1e-18 95.5 198 27.3
AL4G18640 Arabidopsis lyrata HOM05D009534 ORTHO05D011691 5.1e-18 95.5 186 29.0
AT5G30520 Arabidopsis thaliana HOM05D009534 ORTHO05D011691 7.3e-17 91.7 145 38.6
AL7G45040 Arabidopsis lyrata HOM05D009534 ORTHO05D011691 3.2e-12 76.3 90 41.1
AT2G06565 Arabidopsis thaliana HOM05D009534 ORTHO05D011691 9.3e-12 74.7 65 49.2
BolC1t03177H Brassica oleracea HOM05D001224 ORTHO05D003542 2.5e-09 66.6 162 26.5
A10p08840 Brassica napus HOM05D001224 ORTHO05D003542 7.4e-09 65.1 162 27.2
A08p09550 Brassica napus HOM05D001224 ORTHO05D003542 4.8e-08 62.4 162 25.9
C07p06930 Brassica napus HOM05D001224 ORTHO05D003542 4.8e-08 62.4 162 25.9
BraA08t32952Z Brassica rapa HOM05D001224 ORTHO05D003542 4.8e-08 62.4 162 25.9
A05p28400 Brassica napus HOM05D001224 ORTHO05D003542 6.2e-08 62.0 162 27.2
C05p42040 Brassica napus HOM05D001224 ORTHO05D003542 6.2e-08 62.0 208 24.0
BcaC05g28453 Brassica carinata HOM05D001224 ORTHO05D003542 8.1e-08 61.6 165 27.9
BraSC37t46117Z Brassica rapa HOM05D001224 ORTHO05D003542 1.1e-07 61.2 143 28.7
BcaC09g48602 Brassica carinata HOM05D001224 ORTHO05D001170 1.8e-07 60.5 162 25.9
BolC8t49591H Brassica oleracea HOM05D001224 ORTHO05D003542 1.8e-07 60.5 162 25.9
BraA01t02476Z Brassica rapa HOM05D001224 ORTHO05D003542 3.1e-07 59.7 162 26.5
BraA09t40148Z Brassica rapa HOM05D001224 ORTHO05D003542 3.1e-07 59.7 162 25.3
BcaC02g12295 Brassica carinata HOM05D001224 ORTHO05D003542 4.0e-07 59.3 164 27.4
CARHR116560 Cardamine hirsuta HOM05D009534 ORTHO05D011691 4.0e-07 59.3 133 25.6
BcaC05g27785 Brassica carinata HOM05D001224 ORTHO05D003542 5.3e-07 58.9 162 25.3
C05p37790 Brassica napus HOM05D001224 ORTHO05D003542 5.3e-07 58.9 162 25.3
C05p45400 Brassica napus HOM05D001224 ORTHO05D003542 5.3e-07 58.9 162 25.9
BraA07t28368Z Brassica rapa HOM05D001224 ORTHO05D003542 6.9e-07 58.5 162 25.9
A10p06600 Brassica napus HOM05D001224 ORTHO05D003542 9.0e-07 58.2 162 25.9
C06p04840 Brassica napus HOM05D001224 ORTHO05D003542 1.2e-06 57.8 162 25.9
BolC1t04761H Brassica oleracea HOM05D001224 ORTHO05D003542 1.5e-06 57.4 162 25.3
C07p01200 Brassica napus HOM05D001224 ORTHO05D003542 2.6e-06 56.6 158 25.9
A01p25430 Brassica napus HOM05D001224 ORTHO05D003542 5.8e-06 55.5 143 28.0
C07p12000 Brassica napus HOM05D001224 ORTHO05D003542 5.8e-06 55.5 162 25.9
BolC7t41112H Brassica oleracea HOM05D001224 ORTHO05D003542 5.8e-06 55.5 124 29.0


User provided reference genes

Program Settings