Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G17420 Arabidopsis lyrata HOM05D004583 ORTHO05D005469 7.4e-311 1069.7 543 100.0
AT2G25740 Arabidopsis thaliana HOM05D004583 ORTHO05D005469 3.7e-294 1014.2 548 94.3
Carub.0004s0553 Capsella rubella HOM05D004583 ORTHO05D005469 5.7e-271 937.2 550 87.5
Sp4g05420 Schrenkiella parvula HOM05D004583 ORTHO05D005469 3.7e-246 854.7 547 81.7
Thhalv10001956m.g Eutrema salsugineum HOM05D004583 ORTHO05D005469 8.3e-246 853.6 547 81.5
Aa31LG5G9840 Aethionema arabicum HOM05D004583 ORTHO05D005469 1.0e-243 846.7 547 79.9
BcaB08g35216 Brassica carinata HOM05D004583 ORTHO05D005469 5.1e-243 844.3 547 79.5
BolC3t15588H Brassica oleracea HOM05D004583 ORTHO05D005469 1.4e-240 836.3 547 80.3
A03p27060 Brassica napus HOM05D004583 ORTHO05D005469 8.9e-240 833.6 547 79.9
BraA03t11919Z Brassica rapa HOM05D004583 ORTHO05D005469 1.2e-239 833.2 547 79.7
C03p32470 Brassica napus HOM05D004583 ORTHO05D005469 2.6e-239 832.0 547 80.1
CARHR115490 Cardamine hirsuta HOM05D004583 ORTHO05D005469 2.6e-239 832.0 492 85.6
A09p55470 Brassica napus HOM05D004583 ORTHO05D005469 1.7e-230 802.7 551 77.0
BolC8t51418H Brassica oleracea HOM05D004583 ORTHO05D005469 4.4e-223 778.1 551 75.1
BcaC07g40848 Brassica carinata HOM05D004583 ORTHO05D005469 1.7e-222 776.2 547 75.0
THA.LOC104803803 Tarenaya hassleriana HOM05D004583 ORTHO05D005469 5.6e-210 734.6 550 70.0
C08p38460 Brassica napus HOM05D004583 ORTHO05D005469 2.8e-209 732.3 547 72.2
BraA09t40949Z Brassica rapa HOM05D004583 ORTHO05D005469 3.7e-209 731.9 514 75.9
BcaC01g04904 Brassica carinata HOM05D004583 ORTHO05D005469 3.4e-207 725.3 549 72.5
Cfa013385 Carpinus fangiana HOM05D004583 ORTHO05D005469 6.3e-177 624.8 558 60.0
TWI63G0012 Tripterygium wilfordii HOM05D004583 ORTHO05D005469 5.9e-175 618.2 557 60.1
Prupe.1G445300 Prunus persica HOM05D004583 ORTHO05D005469 1.1e-173 614.0 560 58.4
Sc09g0009440 Simmondsia chinensis HOM05D004583 ORTHO05D005469 1.1e-173 614.0 559 60.1
QL12p041048 Quercus lobata HOM05D004583 ORTHO05D005469 4.2e-173 612.1 564 59.0
Hma1.2p1_0049F.1_g028360 Hydrangea macrophylla HOM05D004583 ORTHO05D005469 3.6e-172 609.0 559 59.7
GSVIVG01035292001 Vitis vinifera HOM05D004583 ORTHO05D005469 8.0e-172 607.8 561 58.3
Ciclev10007949m.g Citrus clementina HOM05D004583 ORTHO05D005469 1.1e-170 604.0 553 59.3
Potri.018G046700 Populus trichocarpa HOM05D004583 ORTHO05D005469 5.7e-170 601.7 552 58.7
CSS0042231 Camellia sinensis var. sinensis HOM05D004583 ORTHO05D005469 4.8e-169 598.6 555 59.6
MD15G1090900 Malus domestica HOM05D004583 ORTHO05D005469 4.8e-169 598.6 562 57.8
PGR031G0432 Punica granatum HOM05D004583 ORTHO05D005469 9.1e-168 594.3 566 58.5
Potri.006G236400 Populus trichocarpa HOM05D004583 ORTHO05D005469 1.6e-167 593.6 555 58.2
CANSAT25G3668 Cannabis sativa HOM05D004583 ORTHO05D005469 5.9e-167 591.7 550 57.3
ClCG08G012110 Citrullus lanatus HOM05D004583 ORTHO05D005469 1.0e-166 590.9 557 57.6
Nn6g35316 Nelumbo nucifera HOM05D004583 ORTHO05D005469 1.7e-166 590.1 569 57.5
Manes.16G073800 Manihot esculenta HOM05D004583 ORTHO05D005469 5.0e-166 588.6 554 58.3
HanXRQChr11g0352321 Helianthus annuus HOM05D004583 ORTHO05D005469 1.9e-165 586.6 544 57.5
Lsat_1_v5_gn_1_42160 Lactuca sativa HOM05D004583 ORTHO05D005469 5.5e-165 585.1 546 57.7
CiPaw.08G027000 Carya illinoinensis HOM05D004583 ORTHO05D005469 7.2e-165 584.7 559 57.4
TWI34G1497 Tripterygium wilfordii HOM05D004583 ORTHO05D005469 9.4e-165 584.3 555 57.3
DCAR_004462 Daucus carota HOM05D004583 ORTHO05D005469 2.1e-164 583.2 548 56.9
MD08G1111400 Malus domestica HOM05D004583 ORTHO05D005469 2.1e-164 583.2 560 56.8
Sed0024833 Sechium edule HOM05D004583 ORTHO05D005469 4.7e-164 582.0 561 56.0
Hund03382 Selenicereus undatus HOM05D004583 ORTHO05D005469 6.1e-164 581.6 557 56.2
Sabra18G0045300 Salix brachista HOM05D004583 ORTHO05D005469 3.0e-163 579.3 570 55.8
TAR636G0454 Trochodendron aralioides HOM05D004583 ORTHO05D005469 3.0e-163 579.3 560 55.7
Sabra06G0184800 Salix brachista HOM05D004583 ORTHO05D005469 6.8e-163 578.2 561 56.3
Actinidia15745 Actinidia chinensis HOM05D004583 ORTHO05D005469 8.8e-163 577.8 554 57.6
Sopen12g031740 Solanum pennellii HOM05D004583 ORTHO05D005469 5.7e-162 575.1 556 56.1
Solyc12g095840.2 Solanum lycopersicum HOM05D004583 ORTHO05D005469 1.3e-161 573.9 556 55.9
Thecc.09G047500 Theobroma cacao HOM05D004583 ORTHO05D005469 1.7e-161 573.5 551 54.6
Peaxi162Scf00064g01528 Petunia axillaris HOM05D004583 ORTHO05D005469 4.1e-160 568.9 555 56.6
FvH4_2g35320 Fragaria vesca HOM05D004583 ORTHO05D005469 7.0e-160 568.2 559 56.0
RcHm_v2.0_Chr6g0306601 Rosa chinensis HOM05D004583 ORTHO05D005469 1.2e-159 567.4 556 56.1
FAN20G1421 Fragaria x ananassa HOM05D004583 ORTHO05D005469 1.6e-159 567.0 559 55.6
Cc08_g09870 Coffea canephora HOM05D004583 ORTHO05D005469 2.7e-159 566.2 563 55.8
Gorai.001G026100 Gossypium raimondii HOM05D004583 ORTHO05D005469 1.0e-158 564.3 547 55.6
CAN.G208.65 Capsicum annuum HOM05D004583 ORTHO05D005469 2.2e-158 563.1 531 57.3
Eucgr.C00611 Eucalyptus grandis HOM05D004583 ORTHO05D005469 2.2e-158 563.1 559 56.7
Nitab4.5_0001737g0070 Nicotiana tabacum HOM05D004583 ORTHO05D005469 2.2e-158 563.1 559 55.8
Gohir.A07G022241 Gossypium hirsutum HOM05D004583 ORTHO05D005469 5.0e-158 562.0 547 55.4
Gohir.D07G025000 Gossypium hirsutum HOM05D004583 ORTHO05D005469 1.9e-157 560.1 547 55.2
Lalb_Chr22g0361041 Lupinus albus HOM05D004583 ORTHO05D005469 1.2e-156 557.4 562 55.5
arahy.Tifrunner.gnm1.ann1.R6LPAT Arachis hypogaea HOM05D004583 ORTHO05D005469 2.1e-156 556.6 564 54.3
Nitab4.5_0001309g0070 Nicotiana tabacum HOM05D004583 ORTHO05D005469 2.3e-155 553.1 553 55.3
CsaV3_2G030710 Cucumis sativus L. HOM05D004583 ORTHO05D005469 6.8e-155 551.6 560 55.0
Medtr1g007160 Medicago truncatula HOM05D004583 ORTHO05D005469 6.8e-155 551.6 546 55.7
SHI18791 Sapria himalayana HOM05D004583 ORTHO05D005469 6.8e-155 551.6 556 52.9
Psat6g035200 Pisum sativum HOM05D004583 ORTHO05D005469 3.1e-152 542.7 557 53.1
Rhsim02G0175400 Rhododendron simsii HOM05D004583 ORTHO05D005469 7.0e-152 541.6 554 55.1
PSO210G3632 Papaver somniferum HOM05D004583 ORTHO05D005469 9.1e-152 541.2 560 53.6
ECA248G2390 Erigeron canadensis HOM05D004583 ORTHO05D005469 1.3e-150 537.3 556 53.1
TAR624G1263 Trochodendron aralioides HOM05D004583 ORTHO05D005469 1.7e-150 537.0 554 52.9
FAN27G2572 Fragaria x ananassa HOM05D004583 ORTHO05D005469 2.3e-150 536.6 578 52.9
Migut.E01537 Erythranthe guttata HOM05D004583 ORTHO05D005469 5.0e-150 535.4 547 52.1
MBI04_g20300_MAGBIO Magnolia biondii HOM05D004583 ORTHO05D005469 1.5e-149 533.9 554 53.1
Oeu038813.1 Olea europaea HOM05D004583 ORTHO05D005469 1.9e-149 533.5 571 52.7
EL10Ac2g03985 Beta vulgaris HOM05D004583 ORTHO05D005469 4.2e-149 532.3 577 53.0
PSO210G2011 Papaver somniferum HOM05D004583 ORTHO05D005469 4.2e-149 532.3 554 53.8
VMungo1309G0941 Vigna mungo HOM05D004583 ORTHO05D005469 4.2e-149 532.3 564 53.0
TPR.G24505 Trifolium pratense HOM05D004583 ORTHO05D005469 5.5e-149 531.9 556 53.6
Duzib168G1134 Durio zibethinus HOM05D004583 ORTHO05D005469 9.5e-149 531.2 545 54.1
AUR62009234 Chenopodium quinoa HOM05D004583 ORTHO05D005469 3.6e-148 529.3 574 53.0
Phvul.009G111600 Phaseolus vulgaris HOM05D004583 ORTHO05D005469 6.1e-148 528.5 559 52.4
Lj1g0018877 Lotus japonicus HOM05D004583 ORTHO05D005469 1.5e-146 523.9 558 52.0
AUR62041959 Chenopodium quinoa HOM05D004583 ORTHO05D005469 4.4e-146 522.3 613 50.9
Ca_15574_v3 Cicer arietinum L. HOM05D004583 ORTHO05D005469 1.1e-144 517.7 525 51.8
Aqoxy7G03869 Aquilegia oxysepala HOM05D004583 ORTHO05D005469 3.5e-143 512.7 557 51.9
MELO3C011128.2 Cucumis melo HOM05D004583 ORTHO05D005469 2.3e-142 510.0 628 48.2
Medtr3g110340 Medicago truncatula HOM05D004583 ORTHO05D005469 5.0e-142 508.8 550 51.3
ATR0705G143 Amborella trichopoda HOM05D004583 ORTHO05D005469 2.1e-140 503.4 580 49.5
FAN15G2845 Fragaria x ananassa HOM05D004583 ORTHO05D005469 2.8e-140 503.1 560 52.9
SGA_v2.0_scaffold169G38659 Striga asiatica HOM05D004583 ORTHO05D005469 2.8e-140 503.1 586 49.1
MSTRG.14029 Avicennia marina HOM05D004583 ORTHO05D005469 8.0e-140 501.5 561 50.8
AUR62041963 Chenopodium quinoa HOM05D004583 ORTHO05D005469 1.4e-139 500.7 578 51.2
Psat5g020600 Pisum sativum HOM05D004583 ORTHO05D005469 3.1e-139 499.6 482 55.4
TPR.G12398 Trifolium pratense HOM05D004583 ORTHO05D005469 8.9e-139 498.0 545 51.7
CANSAT35G1178 Cannabis sativa HOM05D004583 ORTHO05D005469 1.1e-136 491.1 554 49.3
Dinv23388 Davidia involucrata HOM05D004583 ORTHO05D005469 3.5e-135 486.1 488 56.6
Lj7C698G10 Lonicera japonica HOM05D004583 ORTHO05D005469 4.6e-135 485.7 508 52.6
Glyma.04G086400 Glycine max HOM05D004583 ORTHO05D005469 6.0e-135 485.3 469 53.9
COL.COLO4_20995 Corchorus olitorius HOM05D004583 ORTHO05D005469 7.8e-135 485.0 503 54.9
Os05g0521500 Oryza sativa ssp. japonica HOM05D004583 ORTHO05D005469 2.5e-133 479.9 555 47.0
SalBow1G6079 Salvia bowleyana HOM05D004583 ORTHO05D005469 1.6e-132 477.2 605 45.5
arahy.Tifrunner.gnm1.ann1.6GB5J4 Arachis hypogaea HOM05D004583 ORTHO05D005469 6.8e-131 471.9 530 51.9
MSTRG.1664 Avicennia marina HOM05D004583 ORTHO05D005469 6.4e-129 465.3 473 51.2
Zm00001eb293710 Zea mays HOM05D004583 ORTHO05D005469 1.2e-127 461.1 558 47.0
arahy.Tifrunner.gnm1.ann1.M0YYQ7 Arachis hypogaea HOM05D004583 ORTHO05D005469 1.7e-126 457.2 480 50.4
Actinidia14686 Actinidia chinensis HOM05D004583 ORTHO05D005469 3.9e-126 456.1 560 49.3
unitig_32.g11475 Utricularia gibba HOM05D004583 ORTHO05D005469 8.6e-126 454.9 545 45.9
arahy.Tifrunner.gnm1.ann1.AK4U3Y Arachis hypogaea HOM05D004583 ORTHO05D005469 1.6e-124 450.7 518 47.7
vmacro11048 Vaccinium macrocarpon HOM05D004583 ORTHO05D005469 2.6e-122 443.4 521 48.9
Lalb_Chr23g0269711 Lupinus albus HOM05D004583 ORTHO05D005469 5.8e-122 442.2 482 49.4
Aqoxy7G01424 Aquilegia oxysepala HOM05D004583 ORTHO05D005469 4.3e-117 426.0 566 45.9
CiPaw.07G202200 Carya illinoinensis HOM05D004583 ORTHO05D005469 9.6e-117 424.9 459 53.8
Os01g0743600 Oryza sativa ssp. japonica HOM05D004583 ORTHO05D005469 2.8e-116 423.3 540 46.7
HPP92_022971 Vanilla planifolia HOM05D004583 ORTHO05D005469 6.0e-111 405.6 450 49.1
Mapoly0168s0005 Marchantia polymorpha HOM05D004583 ORTHO05D005469 1.6e-108 397.5 541 44.0
Pp3c6_5840 Physcomitrium patens HOM05D004583 ORTHO05D005469 1.3e-105 387.9 577 40.4
Rhsim02G0175600 Rhododendron simsii HOM05D004583 ORTHO05D005469 4.9e-105 386.0 466 51.5
Pp3c5_21890 Physcomitrium patens HOM05D004583 ORTHO05D005469 1.4e-104 384.4 586 38.7
Pp3c5_21897 Physcomitrium patens HOM05D004583 ORTHO05D005469 1.4e-104 384.4 586 38.7
Pp3c9_19040 Physcomitrium patens HOM05D004583 ORTHO05D005469 2.7e-103 380.2 580 39.7
DCAR_003076 Daucus carota HOM05D004583 ORTHO05D005469 6.0e-103 379.0 502 45.0
Pp3c15_22980 Physcomitrium patens HOM05D004583 ORTHO05D005469 9.6e-101 371.7 517 40.8
Haze_21911 Corylus avellana HOM05D004583 ORTHO05D005469 1.3e-100 371.3 304 61.8
SMO238G0017 Selaginella moellendorffii HOM05D004583 ORTHO05D005469 4.0e-99 366.3 492 42.3
Zm00001eb153580 Zea mays HOM05D004583 ORTHO05D005469 2.1e-92 344.0 556 39.7
Atru.chr7.2059 Acer truncatum HOM05D004583 ORTHO05D005469 4.5e-90 336.3 305 59.0
SEGI_02523 Sequoiadendron giganteum HOM05D004583 ORTHO05D005469 1.4e-83 314.7 487 43.1
CDE02G1982 Ceratophyllum demersum HOM05D004583 ORTHO05D001336 4.1e-83 313.2 365 46.3
CBR_g21950 Chara braunii HOM05D004583 ORTHO05D005469 6.5e-73 279.3 705 30.8
Pp3c16_16060 Physcomitrium patens HOM05D004583 ORTHO05D005469 1.2e-71 275.0 594 33.5
Pp3c27_6400 Physcomitrium patens HOM05D004583 ORTHO05D005469 2.3e-70 270.8 637 32.7
MBI04_g32315_MAGBIO Magnolia biondii HOM05D004583 ORTHO05D005469 4.3e-69 266.5 181 66.3
Cpa.g.sc7.206 Carica papaya HOM05D004583 ORTHO05D005469 9.7e-69 265.4 168 73.8
AagrBONN_evm.TU.Sc2ySwM_117.1952 Anthoceros agrestis HOM05D004583 ORTHO05D005469 4.2e-64 250.0 460 37.6
Ah.10g034890 Amaranthus hybridus HOM05D004583 ORTHO05D005469 8.2e-60 235.7 394 42.9
Cpa.g.c37634 Carica papaya HOM05D004583 ORTHO05D005469 2.2e-49 201.1 256 49.6
Atru.chr7.2058 Acer truncatum HOM05D004583 ORTHO05D005469 7.2e-48 196.1 197 57.4
TPR.G9691 Trifolium pratense HOM05D004583 ORTHO05D005469 7.0e-43 179.5 241 41.9
Haze_21912 Corylus avellana HOM05D004583 ORTHO05D005469 1.1e-40 172.2 162 59.3
Glyma.06G087900 Glycine max HOM05D004583 ORTHO05D005469 9.8e-37 159.1 128 57.8
Lj4g0027824 Lotus japonicus HOM05D004583 ORTHO05D005469 2.8e-36 157.5 142 62.0
CDE02G3504 Ceratophyllum demersum HOM05D004583 ORTHO05D005469 3.5e-34 150.6 164 53.0
Aqoxy6G01950 Aquilegia oxysepala HOM05D004583 ORTHO05D005469 4.5e-34 150.2 282 39.7
Ca_19225_v3 Cicer arietinum L. HOM05D004583 ORTHO05D005469 2.5e-32 144.4 175 52.0
MBI04_g42480_MAGBIO Magnolia biondii HOM05D004583 ORTHO05D005469 3.3e-32 144.1 158 53.2
Aqoxy6G01951 Aquilegia oxysepala HOM05D004583 ORTHO05D005469 1.2e-26 125.6 94 63.8
Ca_12761_v3 Cicer arietinum L. HOM05D004583 ORTHO05D005469 6.6e-25 119.8 156 46.8
PRCOL_00000859 Prasinoderma coloniale HOM05D004583 ORTHO05D005469 3.1e-22 110.9 180 35.6
MCO16G603 Micromonas commoda HOM05D004583 ORTHO05D005469 1.7e-20 105.1 165 33.3
Duzib150G0365 Durio zibethinus HOM05D004583 ORTHO05D005469 3.2e-19 100.9 70 62.9
TPR.G7872 Trifolium pratense HOM05D004583 ORTHO05D005469 1.6e-15 88.6 104 44.2
HPP92_022972 Vanilla planifolia HOM05D004583 ORTHO05D005469 6.8e-14 83.2 105 47.6
Cpa.g.c46051 Carica papaya HOM05D004583 ORTHO05D005469 1.6e-10 72.0 39 76.9


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