Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G17070 Arabidopsis lyrata HOM05D007351 ORTHO05D009386 1.9e-115 419.1 200 100.0
Carub.0004s0533 Capsella rubella HOM05D007351 ORTHO05D009386 8.7e-108 393.7 200 94.0
AT2G25605 Arabidopsis thaliana HOM05D007351 ORTHO05D009386 2.1e-106 389.0 201 94.0
CARHR115710 Cardamine hirsuta HOM05D007351 ORTHO05D009386 4.5e-104 381.3 200 91.5
Thhalv10000330m.g Eutrema salsugineum HOM05D007351 ORTHO05D009386 4.9e-103 377.9 200 91.5
A04p19820 Brassica napus HOM05D007351 ORTHO05D009386 2.7e-101 372.1 201 90.5
BraA04t17570Z Brassica rapa HOM05D007351 ORTHO05D009386 3.5e-101 371.7 201 90.5
BcaC02g08337 Brassica carinata HOM05D007351 ORTHO05D009386 7.9e-101 370.5 201 90.5
C04p55560 Brassica napus HOM05D007351 ORTHO05D009386 7.9e-101 370.5 201 90.5
BolC4t27080H Brassica oleracea HOM05D007351 ORTHO05D009386 7.9e-101 370.5 201 90.5
BcaB06g28079 Brassica carinata HOM05D007351 ORTHO05D009386 1.8e-100 369.4 201 89.6
Aa31sc586G10 Aethionema arabicum HOM05D007351 ORTHO05D009386 6.9e-97 357.5 200 87.0
THA.LOC104804500 Tarenaya hassleriana HOM05D007351 ORTHO05D009386 3.3e-91 338.6 199 82.9
GSVIVG01035772001 Vitis vinifera HOM05D007351 ORTHO05D009386 1.7e-87 326.2 203 77.8
Sabra06G0194800 Salix brachista HOM05D007351 ORTHO05D009386 1.1e-86 323.6 200 77.5
Potri.006G249000 Populus trichocarpa HOM05D007351 ORTHO05D009386 1.9e-86 322.8 201 77.6
CiPaw.08G014100 Carya illinoinensis HOM05D007351 ORTHO05D009386 2.5e-86 322.4 194 78.9
Atru.chr7.2359 Acer truncatum HOM05D007351 ORTHO05D009386 4.2e-86 321.6 200 79.0
TWI34G1290 Tripterygium wilfordii HOM05D007351 ORTHO05D009386 4.2e-86 321.6 204 75.5
Prupe.1G471900 Prunus persica HOM05D007351 ORTHO05D009386 1.2e-85 320.1 206 76.2
COL.COLO4_24001 Corchorus olitorius HOM05D007351 ORTHO05D009386 6.1e-85 317.8 196 76.5
Eucgr.C01805 Eucalyptus grandis HOM05D007351 ORTHO05D009386 6.1e-85 317.8 207 75.4
arahy.Tifrunner.gnm1.ann1.C4YKET Arachis hypogaea HOM05D007351 ORTHO05D009386 1.0e-84 317.0 203 74.4
Thecc.09G147600 Theobroma cacao HOM05D007351 ORTHO05D009386 1.8e-84 316.2 196 78.6
Nn2g11909 Nelumbo nucifera HOM05D007351 ORTHO05D009386 2.3e-84 315.8 197 77.2
Cpa.g.sc91.32 Carica papaya HOM05D007351 ORTHO05D009386 3.0e-84 315.5 212 73.6
FAN24G0983 Fragaria x ananassa HOM05D007351 ORTHO05D009386 3.9e-84 315.1 200 76.0
FvH4_2g29770 Fragaria vesca HOM05D007351 ORTHO05D009386 5.1e-84 314.7 202 75.7
FAN27G2935 Fragaria x ananassa HOM05D007351 ORTHO05D009386 5.1e-84 314.7 200 76.0
Ca_15711_v3 Cicer arietinum L. HOM05D007351 ORTHO05D009386 1.1e-83 313.5 200 74.0
FAN15G3188 Fragaria x ananassa HOM05D007351 ORTHO05D009386 1.9e-83 312.8 200 76.0
RcHm_v2.0_Chr6g0298791 Rosa chinensis HOM05D007351 ORTHO05D009386 1.9e-83 312.8 167 85.0
TAR625G1337 Trochodendron aralioides HOM05D007351 ORTHO05D009386 1.9e-83 312.8 167 85.0
Lj8A616G46 Lonicera japonica HOM05D007351 ORTHO05D009386 5.7e-83 311.2 202 74.8
MD08G1141900 Malus domestica HOM05D007351 ORTHO05D009386 5.7e-83 311.2 200 75.5
Manes.16G118400 Manihot esculenta HOM05D007351 ORTHO05D009386 9.7e-83 310.5 167 83.8
Hma1.2p1_0000F.1_g000940 Hydrangea macrophylla HOM05D007351 ORTHO05D009386 1.6e-82 309.7 189 77.8
Medtr3g107860 Medicago truncatula HOM05D007351 ORTHO05D009386 2.2e-82 309.3 200 72.0
Actinidia15698 Actinidia chinensis HOM05D007351 ORTHO05D009386 2.8e-82 308.9 200 75.0
CSS0046405 Camellia sinensis var. sinensis HOM05D007351 ORTHO05D009386 2.8e-82 308.9 206 74.3
Gorai.004G110800 Gossypium raimondii HOM05D007351 ORTHO05D009386 2.8e-82 308.9 166 86.1
Psat5g027160 Pisum sativum HOM05D007351 ORTHO05D009386 4.8e-82 308.1 203 72.4
PSO170G0157 Papaver somniferum HOM05D007351 ORTHO05D009386 1.4e-81 306.6 188 77.1
Ciclev10009550m.g Citrus clementina HOM05D007351 ORTHO05D009386 1.8e-81 306.2 197 78.2
MBI04_g00950_MAGBIO Magnolia biondii HOM05D007351 ORTHO05D009386 1.8e-81 306.2 205 71.7
PSO017G1621 Papaver somniferum HOM05D007351 ORTHO05D009386 2.4e-81 305.8 188 76.6
Nitab4.5_0000508g0220 Nicotiana tabacum HOM05D007351 ORTHO05D009386 5.3e-81 304.7 200 74.0
arahy.Tifrunner.gnm1.ann1.8MNE4Q Arachis hypogaea HOM05D007351 ORTHO05D009386 6.9e-81 304.3 224 67.4
EL10Ac2g02569 Beta vulgaris HOM05D007351 ORTHO05D009386 6.9e-81 304.3 205 73.2
Lalb_Chr23g0268831 Lupinus albus HOM05D007351 ORTHO05D009386 2.0e-80 302.8 167 81.4
Glyma.06G071600 Glycine max HOM05D007351 ORTHO05D009386 2.6e-80 302.4 176 77.3
Sc06g0000580 Simmondsia chinensis HOM05D007351 ORTHO05D009386 2.6e-80 302.4 191 75.4
Gohir.A08G090000 Gossypium hirsutum HOM05D007351 ORTHO05D009386 3.4e-80 302.0 165 84.2
Lj1g0014043 Lotus japonicus HOM05D007351 ORTHO05D009386 3.4e-80 302.0 200 72.5
TPR.G27335 Trifolium pratense HOM05D007351 ORTHO05D009386 7.7e-80 300.8 196 71.9
Cc11_g01660 Coffea canephora HOM05D007351 ORTHO05D009386 1.0e-79 300.4 200 72.5
PGSC0003DMG400007382 Solanum tuberosum HOM05D007351 ORTHO05D009386 1.3e-79 300.1 200 72.5
HanXRQChr13g0402411 Helianthus annuus HOM05D007351 ORTHO05D009386 1.7e-79 299.7 188 75.5
Phvul.009G096100 Phaseolus vulgaris HOM05D007351 ORTHO05D009386 2.9e-79 298.9 200 71.0
Glyma.04G069700 Glycine max HOM05D007351 ORTHO05D009386 3.8e-79 298.5 200 70.5
Solyc08g067430.4 Solanum lycopersicum HOM05D007351 ORTHO05D009386 5.0e-79 298.1 200 72.0
AUR62032351 Chenopodium quinoa HOM05D007351 ORTHO05D009386 8.5e-79 297.4 215 71.2
Peaxi162Scf00251g01128 Petunia axillaris HOM05D007351 ORTHO05D009386 2.5e-78 295.8 168 79.8
Rhsim07G0150700 Rhododendron simsii HOM05D007351 ORTHO05D009386 1.2e-77 293.5 212 68.9
Lsat_1_v5_gn_6_21681 Lactuca sativa HOM05D007351 ORTHO05D009386 1.6e-77 293.1 188 73.9
Hund03010 Selenicereus undatus HOM05D007351 ORTHO05D009386 1.6e-77 293.1 189 74.6
Migut.A00300 Erythranthe guttata HOM05D007351 ORTHO05D009386 2.7e-77 292.4 188 73.4
MSTRG.11754 Avicennia marina HOM05D007351 ORTHO05D009386 4.6e-77 291.6 165 80.6
Aqoxy7G02003 Aquilegia oxysepala HOM05D007351 ORTHO05D009386 1.0e-76 290.4 184 74.5
Nitab4.5_0002339g0070 Nicotiana tabacum HOM05D007351 ORTHO05D009386 3.9e-76 288.5 203 71.4
ECA233G0102 Erigeron canadensis HOM05D007351 ORTHO05D009386 5.1e-76 288.1 166 78.9
MELO3C003678.2 Cucumis melo HOM05D007351 ORTHO05D009386 8.8e-76 287.3 167 76.6
Sed0005695 Sechium edule HOM05D007351 ORTHO05D009386 2.0e-75 286.2 198 67.2
SGA_v2.0_scaffold448G51771 Striga asiatica HOM05D007351 ORTHO05D009386 2.0e-75 286.2 183 73.8
ATR0680G179 Amborella trichopoda HOM05D007351 ORTHO05D009386 1.7e-74 283.1 170 78.8
Sopen08g021360 Solanum pennellii HOM05D007351 ORTHO05D009386 2.2e-74 282.7 200 69.5
unitig_32.g11667 Utricularia gibba HOM05D007351 ORTHO05D009386 2.8e-74 282.3 188 71.8
Os05g0574700 Oryza sativa ssp. japonica HOM05D007351 ORTHO05D009386 3.7e-74 282.0 167 76.6
vmacro05202 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 8.2e-74 280.8 153 83.7
CDE06G1133 Ceratophyllum demersum HOM05D007351 ORTHO05D009386 1.1e-73 280.4 169 79.3
Sp4g05090 Schrenkiella parvula HOM05D007351 ORTHO05D009386 2.4e-73 279.3 140 94.3
VMungo1309G2796 Vigna mungo HOM05D007351 ORTHO05D009386 2.5e-70 269.2 211 64.9
AUR62041846 Chenopodium quinoa HOM05D007351 ORTHO05D009386 9.4e-70 267.3 164 78.7
SEGI_27006 Sequoiadendron giganteum HOM05D007351 ORTHO05D009386 3.9e-68 261.9 180 66.7
Duzib150G1343 Durio zibethinus HOM05D007351 ORTHO05D009386 4.4e-67 258.5 169 76.9
QL12p031742 Quercus lobata HOM05D007351 ORTHO05D009386 4.4e-67 258.5 171 76.6
PGR031G1798 Punica granatum HOM05D007351 ORTHO05D009386 6.3e-66 254.6 150 79.3
Gohir.D08G102800 Gossypium hirsutum HOM05D007351 ORTHO05D009386 1.1e-65 253.8 141 83.7
CsaV3_3G046600 Cucumis sativus L. HOM05D007351 ORTHO05D009386 2.4e-65 252.7 141 80.1
CANSAT11G2455 Cannabis sativa HOM05D007351 ORTHO05D009386 1.3e-63 246.9 221 59.7
DCAR_003046 Daucus carota HOM05D007351 ORTHO05D009386 1.9e-62 243.0 144 79.9
Mapoly0036s0071 Marchantia polymorpha HOM05D007351 ORTHO05D009386 8.0e-61 237.7 163 65.6
Zm00001eb344390 Zea mays HOM05D007351 ORTHO05D009386 3.0e-60 235.7 147 74.1
Pp3c17_16830 Physcomitrium patens HOM05D007351 ORTHO05D009386 1.1e-57 227.3 168 64.3
SMO269G0024 Selaginella moellendorffii HOM05D007351 ORTHO05D009386 2.4e-57 226.1 154 66.9
Haze_21592 Corylus avellana HOM05D007351 ORTHO05D009386 1.6e-56 223.4 111 91.0
Oeu045191.1 Olea europaea HOM05D007351 ORTHO05D009386 3.5e-56 222.2 186 62.4
AagrBONN_evm.TU.Sc2ySwM_228.1243 Anthoceros agrestis HOM05D007351 ORTHO05D009386 1.0e-55 220.7 152 69.1
CBR_g40414 Chara braunii HOM05D007351 ORTHO05D009386 2.7e-48 196.1 156 57.7
CANSAT54G2502 Cannabis sativa HOM05D007351 ORTHO05D009386 3.3e-46 189.1 192 55.7
Cre17.g746897 Chlamydomonas reinhardtii HOM05D007351 ORTHO05D009386 1.8e-28 130.2 140 43.6
vmacro05206 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 6.0e-16 88.6 165 36.4
Pp3c16_22900 Physcomitrium patens HOM05D033550 ORTHO05D017832 2.9e-10 69.7 133 36.1
Lsat_1_v5_gn_4_127141 Lactuca sativa HOM05D007351 ORTHO05D009386 3.2e-09 66.2 37 75.7
SEGI_25541 Sequoiadendron giganteum HOM05D007351 ORTHO05D017832 1.9e-06 57.0 138 31.2
Mapoly0006s0206 Marchantia polymorpha HOM05D017363 ORTHO05D018319 2.5e-06 56.6 177 25.4


User provided reference genes

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