Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G16430 Arabidopsis lyrata HOM05D009667 ORTHO05D011358 6.3e-48 193.7 96 100.0
AT2G25185 Arabidopsis thaliana HOM05D009667 ORTHO05D011358 5.7e-41 170.6 96 89.6
Carub.0004s0477 Capsella rubella HOM05D009667 ORTHO05D011358 1.4e-34 149.4 99 78.8
BolC8t49244H Brassica oleracea HOM05D014424 ORTHO05D016833 1.4e-31 139.4 99 71.7
CARHR112290 Cardamine hirsuta HOM05D014424 ORTHO05D016833 1.2e-14 83.2 59 71.2
Thhalv10009911m.g Eutrema salsugineum HOM05D014424 ORTHO05D016833 1.2e-14 83.2 74 62.2
BolC5t29889H Brassica oleracea HOM05D014424 ORTHO05D016833 1.1e-12 76.6 65 63.1
BolC5t29891H Brassica oleracea HOM05D014424 ORTHO05D016833 4.3e-12 74.7 65 61.5
Carub.0005s0322 Capsella rubella HOM05D009667 ORTHO05D011358 9.6e-12 73.6 104 36.5
A02p30690 Brassica napus HOM05D009667 ORTHO05D011358 1.2e-11 73.2 100 42.0
BraA02t08085Z Brassica rapa HOM05D009667 ORTHO05D011358 1.2e-11 73.2 100 42.0
CARHR146420 Cardamine hirsuta HOM05D009667 ORTHO05D011358 2.8e-11 72.0 100 39.0
C08p16250 Brassica napus HOM05D014424 ORTHO05D016833 4.7e-11 71.2 47 70.2
BolC2t10859H Brassica oleracea HOM05D009667 ORTHO05D011358 1.1e-10 70.1 100 40.0
C02p48270 Brassica napus HOM05D009667 ORTHO05D011358 1.4e-10 69.7 100 40.0
Thhalv10005651m.g Eutrema salsugineum HOM05D009667 ORTHO05D011358 5.2e-10 67.8 98 36.7
Gorai.013G100000 Gossypium raimondii HOM05D020537 ORTHO05D011358 5.2e-10 67.8 93 33.3
Gohir.D13G087533 Gossypium hirsutum HOM05D020537 ORTHO05D011358 8.9e-10 67.0 93 32.3
Gohir.D13G087566 Gossypium hirsutum HOM05D020537 ORTHO05D011358 8.9e-10 67.0 93 32.3
Gorai.013G099900 Gossypium raimondii HOM05D020537 ORTHO05D011358 1.2e-09 66.6 93 32.3
Sp2g14770 Schrenkiella parvula HOM05D009667 ORTHO05D011358 1.2e-09 66.6 100 39.0
A06p09680 Brassica napus HOM05D014424 ORTHO05D016833 2.0e-09 65.9 54 61.1
C05p11380 Brassica napus HOM05D014424 ORTHO05D016833 2.0e-09 65.9 54 61.1
BraA06t24158Z Brassica rapa HOM05D014424 ORTHO05D016833 2.0e-09 65.9 54 61.1
A02p33810 Brassica napus HOM05D009667 ORTHO05D011358 7.6e-09 63.9 103 34.0
BraA02t08399Z Brassica rapa HOM05D009667 ORTHO05D011358 7.6e-09 63.9 103 34.0
AT1G47317 Arabidopsis thaliana HOM05D010246 ORTHO05D012450 1.7e-08 62.8 97 38.1
Thhalv10005337m.g Eutrema salsugineum HOM05D009667 ORTHO05D011358 2.2e-08 62.4 101 35.6
Sp2g14760 Schrenkiella parvula HOM05D009667 ORTHO05D011358 2.2e-08 62.4 101 33.7
AL5G13920 Arabidopsis lyrata HOM05D009667 ORTHO05D011358 2.9e-08 62.0 98 35.7
Thhalv10005319m.g Eutrema salsugineum HOM05D015103 ORTHO05D017408 4.9e-08 61.2 103 35.9
BcaC03g16926 Brassica carinata HOM05D009667 ORTHO05D011358 8.4e-08 60.5 78 42.3
Sp2g14750 Schrenkiella parvula HOM05D015103 ORTHO05D017408 8.4e-08 60.5 103 34.0
COL.COLO4_27769 Corchorus olitorius HOM05D020537 ORTHO05D011358 1.9e-07 59.3 93 32.3
CARHR146430 Cardamine hirsuta HOM05D009667 ORTHO05D011358 2.1e-06 55.8 52 44.2
AT2G04046 Arabidopsis thaliana HOM05D009667 ORTHO05D011358 4.6e-06 54.7 103 30.1


User provided reference genes

Program Settings