Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G15950 Arabidopsis lyrata HOM05D007253 ORTHO05D009055 3.8e-68 261.5 146 100.0
AT2G24860 Arabidopsis thaliana HOM05D007253 ORTHO05D009055 9.9e-61 236.9 146 93.2
Carub.0004s0449 Capsella rubella HOM05D007253 ORTHO05D009055 1.1e-54 216.9 146 87.0
Thhalv10000367m.g Eutrema salsugineum HOM05D007253 ORTHO05D009055 1.5e-53 213.0 147 85.7
CARHR116800 Cardamine hirsuta HOM05D007253 ORTHO05D009055 5.8e-53 211.1 146 84.2
BcaC02g08395 Brassica carinata HOM05D007253 ORTHO05D009055 2.9e-52 208.8 150 83.3
C04p54740 Brassica napus HOM05D007253 ORTHO05D009055 2.9e-52 208.8 150 83.3
A04p19250 Brassica napus HOM05D007253 ORTHO05D009055 6.4e-52 207.6 150 83.3
BraA04t17525Z Brassica rapa HOM05D007253 ORTHO05D009055 6.4e-52 207.6 150 83.3
BolC4t27019H Brassica oleracea HOM05D007253 ORTHO05D009055 8.4e-52 207.2 150 82.7
BcaB06g28020 Brassica carinata HOM05D007253 ORTHO05D009055 1.4e-51 206.5 150 82.0
Sp4g03910 Schrenkiella parvula HOM05D007253 ORTHO05D009055 1.6e-50 203.0 150 82.0
Aa31LG7G11560 Aethionema arabicum HOM05D007253 ORTHO05D009055 2.4e-46 189.1 144 79.2
THA.LOC104803610 Tarenaya hassleriana HOM05D007253 ORTHO05D009055 1.9e-40 169.5 144 71.5
TWI63G1073 Tripterygium wilfordii HOM05D007253 ORTHO05D009055 2.7e-34 149.1 156 62.2
Actinidia14140 Actinidia chinensis HOM05D007253 ORTHO05D009055 3.6e-34 148.7 146 66.4
COL.COLO4_18974 Corchorus olitorius HOM05D007253 ORTHO05D009055 6.1e-34 147.9 155 62.6
Manes.03G007000 Manihot esculenta HOM05D007253 ORTHO05D009055 5.1e-33 144.8 154 66.2
PGR044G0212 Punica granatum HOM05D007253 ORTHO05D009055 1.1e-32 143.7 145 65.5
Nn8g40104 Nelumbo nucifera HOM05D007253 ORTHO05D009055 1.9e-32 142.9 100 84.0
CSS0046604 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 2.5e-32 142.5 152 61.2
CSS0050010 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 2.5e-32 142.5 152 61.2
Ciclev10009764m.g Citrus clementina HOM05D007253 ORTHO05D009055 3.3e-32 142.1 100 85.0
Cpa.g.sc148.44 Carica papaya HOM05D007253 ORTHO05D009055 5.7e-32 141.4 146 63.7
Eucgr.C04033 Eucalyptus grandis HOM05D007253 ORTHO05D009055 7.4e-32 141.0 144 66.7
Thecc.09G013200 Theobroma cacao HOM05D007253 ORTHO05D009055 7.4e-32 141.0 100 85.0
Duzib168G0559 Durio zibethinus HOM05D007253 ORTHO05D009055 1.3e-31 140.2 99 85.9
Duzib187G0122 Durio zibethinus HOM05D007253 ORTHO05D009055 1.7e-31 139.8 100 80.0
Nitab4.5_0000264g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 1.7e-31 139.8 146 61.0
Hund25608 Selenicereus undatus HOM05D007253 ORTHO05D009055 2.8e-31 139.0 149 60.4
CSS0024958 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 3.7e-31 138.7 100 79.0
CSS0026470 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 3.7e-31 138.7 100 79.0
Dinv03404 Davidia involucrata HOM05D007253 ORTHO05D009055 4.8e-31 138.3 152 61.8
ATR0580G321 Amborella trichopoda HOM05D007253 ORTHO05D009055 6.3e-31 137.9 107 77.6
CiPaw.07G233200 Carya illinoinensis HOM05D007253 ORTHO05D009055 6.3e-31 137.9 153 60.1
Sc09g0010780 Simmondsia chinensis HOM05D007253 ORTHO05D009055 1.1e-30 137.1 145 62.8
TAR626G1108 Trochodendron aralioides HOM05D007253 ORTHO05D009055 1.4e-30 136.7 100 81.0
GSVIVG01035999001 Vitis vinifera HOM05D007253 ORTHO05D009055 1.4e-30 136.7 100 84.0
Atru.chr7.2576 Acer truncatum HOM05D007253 ORTHO05D009055 1.8e-30 136.3 156 58.3
CANSAT35G1478 Cannabis sativa HOM05D007253 ORTHO05D009055 1.8e-30 136.3 102 77.5
Medtr3g105830 Medicago truncatula HOM05D007253 ORTHO05D009055 1.8e-30 136.3 143 64.3
Nitab4.5_0005450g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 1.8e-30 136.3 146 58.2
Prupe.1G396700 Prunus persica HOM05D007253 ORTHO05D009055 2.4e-30 136.0 150 60.0
RcHm_v2.0_Chr6g0299201 Rosa chinensis HOM05D007253 ORTHO05D009055 2.4e-30 136.0 156 59.6
FAN27G1409 Fragaria x ananassa HOM05D007253 ORTHO05D009055 3.1e-30 135.6 148 60.8
HPP92_010354 Vanilla planifolia HOM05D007253 ORTHO05D009055 3.1e-30 135.6 136 66.2
Cc08_g07700 Coffea canephora HOM05D007253 ORTHO05D009055 4.1e-30 135.2 136 63.2
FvH4_2g41340 Fragaria vesca HOM05D007253 ORTHO05D009055 4.1e-30 135.2 100 80.0
Aqoxy7G03301 Aquilegia oxysepala HOM05D007253 ORTHO05D009055 5.3e-30 134.8 101 63.4
CDE05G3047 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 5.3e-30 134.8 105 81.0
Gohir.D05G063600 Gossypium hirsutum HOM05D007253 ORTHO05D009055 5.3e-30 134.8 100 82.0
Gorai.009G064300 Gossypium raimondii HOM05D007253 ORTHO05D009055 5.3e-30 134.8 100 83.0
Lsat_1_v5_gn_6_77860 Lactuca sativa HOM05D007253 ORTHO05D009055 5.3e-30 134.8 140 65.0
Psat5g033080 Pisum sativum HOM05D007253 ORTHO05D009055 5.3e-30 134.8 99 81.8
HanXRQChr13g0413301 Helianthus annuus HOM05D007253 ORTHO05D009055 6.9e-30 134.4 100 79.0
Lj1g0002882 Lotus japonicus HOM05D007253 ORTHO05D009055 6.9e-30 134.4 99 77.8
ECA240G1715 Erigeron canadensis HOM05D001941 ORTHO05D002198 1.2e-29 133.7 146 59.6
ClCG05G016120 Citrullus lanatus HOM05D007253 ORTHO05D009055 1.5e-29 133.3 100 80.0
Lalb_Chr23g0268151 Lupinus albus HOM05D007253 ORTHO05D009055 2.0e-29 132.9 144 59.7
MBI14_g31385_MAGBIO Magnolia biondii HOM05D007253 ORTHO05D009055 2.0e-29 132.9 142 62.0
Ah.00g238170 Amaranthus hybridus HOM05D007253 ORTHO05D009055 2.6e-29 132.5 101 76.2
Ah.12g060580 Amaranthus hybridus HOM05D007253 ORTHO05D009055 2.6e-29 132.5 101 76.2
arahy.Tifrunner.gnm1.ann1.LF5WZD Arachis hypogaea HOM05D007253 ORTHO05D009055 2.6e-29 132.5 99 80.8
FAN15G3156 Fragaria x ananassa HOM05D007253 ORTHO05D009055 3.4e-29 132.1 100 78.0
MD15G1043300 Malus domestica HOM05D007253 ORTHO05D009055 4.5e-29 131.7 149 59.7
PSO063G6023 Papaver somniferum HOM05D007253 ORTHO05D009055 5.9e-29 131.3 101 80.2
TPR.G1881 Trifolium pratense HOM05D007253 ORTHO05D009055 5.9e-29 131.3 138 63.8
Os09g0423700 Oryza sativa ssp. japonica HOM05D007253 ORTHO05D009055 7.7e-29 131.0 98 78.6
Sed0002011 Sechium edule HOM05D007253 ORTHO05D009055 7.7e-29 131.0 100 75.0
MELO3C016946.2 Cucumis melo HOM05D007253 ORTHO05D009055 1.3e-28 130.2 100 80.0
Potri.006G266800 Populus trichocarpa HOM05D007253 ORTHO05D009055 1.3e-28 130.2 99 80.8
CAN.G285.13 Capsicum annuum HOM05D007253 ORTHO05D009055 2.2e-28 129.4 141 57.4
SalBow8G5515 Salvia bowleyana HOM05D007253 ORTHO05D009055 2.2e-28 129.4 100 78.0
SGA_v2.0_scaffold4G02163 Striga asiatica HOM05D007253 ORTHO05D009055 3.8e-28 128.6 100 77.0
PSO782G0429 Papaver somniferum HOM05D007253 ORTHO05D009055 5.0e-28 128.3 101 79.2
EL10Ac2g02465 Beta vulgaris HOM05D007253 ORTHO05D009055 6.5e-28 127.9 103 74.8
Migut.E01444 Erythranthe guttata HOM05D007253 ORTHO05D009055 6.5e-28 127.9 102 78.4
arahy.Tifrunner.gnm1.ann1.2K72KI Arachis hypogaea HOM05D007253 ORTHO05D009055 1.9e-27 126.3 142 59.9
Glyma.17G221800 Glycine max HOM05D007253 ORTHO05D009055 1.9e-27 126.3 99 79.8
Potri.018G016400 Populus trichocarpa HOM05D007253 ORTHO05D009055 2.5e-27 125.9 97 80.4
Oeu023241.1 Olea europaea HOM05D007253 ORTHO05D009055 3.2e-27 125.6 100 77.0
MD08G1052200 Malus domestica HOM05D007253 ORTHO05D009055 4.2e-27 125.2 70 77.1
DCAR_000661 Daucus carota HOM05D007253 ORTHO05D009055 9.4e-27 124.0 101 77.2
Phvul.009G086100 Phaseolus vulgaris HOM05D007253 ORTHO05D009055 9.4e-27 124.0 144 60.4
Solyc08g006620.3 Solanum lycopersicum HOM05D007253 ORTHO05D009055 9.4e-27 124.0 109 67.0
Sopen08g002570 Solanum pennellii HOM05D007253 ORTHO05D009055 9.4e-27 124.0 109 67.0
Glyma.04G059900 Glycine max HOM05D007253 ORTHO05D009055 2.1e-26 122.9 99 74.7
MSTRG.13960 Avicennia marina HOM05D007253 ORTHO05D009055 2.7e-26 122.5 98 78.6
arahy.Tifrunner.gnm1.ann1.G7TND8 Arachis hypogaea HOM05D007253 ORTHO05D009055 3.6e-26 122.1 99 74.7
Glyma.14G104200 Glycine max HOM05D007253 ORTHO05D009055 3.6e-26 122.1 99 77.8
Zm00001eb313320 Zea mays HOM05D007253 ORTHO05D009055 4.7e-26 121.7 91 62.6
Glyma.06G060300 Glycine max HOM05D007253 ORTHO05D009055 6.1e-26 121.3 99 76.8
vmacro05116 Vaccinium macrocarpon HOM05D007253 ORTHO05D009055 1.4e-25 120.2 135 60.7
CDE02G4354 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 2.3e-25 119.4 93 81.7
unitig_32.g11120 Utricularia gibba HOM05D007253 ORTHO05D009055 6.7e-25 117.9 98 75.5
SEGI_37228 Sequoiadendron giganteum HOM05D007253 ORTHO05D009055 9.7e-24 114.0 96 74.0
TAR383G0216 Trochodendron aralioides HOM05D007253 ORTHO05D009055 1.5e-21 106.7 77 83.1
Pp3c6_11160 Physcomitrium patens HOM05D007253 ORTHO05D009055 1.3e-20 103.6 102 67.6
AagrBONN_evm.TU.Sc2ySwM_117.2542 Anthoceros agrestis HOM05D007253 ORTHO05D009055 2.9e-20 102.4 106 61.3
AUR62032436 Chenopodium quinoa HOM05D007253 ORTHO05D009055 1.4e-19 100.1 77 77.9
Peaxi162Scf00045g01937 Petunia axillaris HOM05D007253 ORTHO05D009055 3.2e-19 99.0 73 84.9
Mapoly0121s0030 Marchantia polymorpha HOM05D007253 ORTHO05D009055 6.1e-18 94.7 89 66.3
PGSC0003DMG400026305 Solanum tuberosum HOM05D005612 ORTHO05D007014 1.4e-17 93.6 74 75.7
SMO196G0205 Selaginella moellendorffii HOM05D007253 ORTHO05D009055 5.2e-17 91.7 81 69.1
Gohir.A05G061100 Gossypium hirsutum HOM05D007253 ORTHO05D009055 8.8e-09 64.3 41 73.2


User provided reference genes

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