Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G15710 Arabidopsis lyrata HOM05D025523 ORTHO05D023653 1.2e-41 172.6 79 100.0
AL6G45810 Arabidopsis lyrata HOM05D025523 ORTHO05D023653 1.7e-30 135.6 79 70.9
AT4G11393 Arabidopsis thaliana HOM05D025523 ORTHO05D023653 7.1e-29 130.2 79 68.4
CARHR179090 Cardamine hirsuta HOM05D025523 ORTHO05D023653 3.1e-24 114.8 80 63.8
CARHR131460 Cardamine hirsuta HOM05D025523 ORTHO05D023653 5.2e-24 114.0 80 65.0
BolC1t05675H Brassica oleracea HOM05D011267 ORTHO05D013190 1.5e-15 85.9 76 52.6
BraA01t04490Z Brassica rapa HOM05D011267 ORTHO05D013190 2.2e-14 82.0 76 51.3
AL4G15700 Arabidopsis lyrata HOM05D007338 ORTHO05D013190 6.4e-14 80.5 78 47.4
AT3G05727 Arabidopsis thaliana HOM05D011267 ORTHO05D013190 2.7e-12 75.1 76 46.1
CARHR080190 Cardamine hirsuta HOM05D011267 ORTHO05D013190 3.5e-12 74.7 76 48.7
AL3G16430 Arabidopsis lyrata HOM05D011267 ORTHO05D013190 2.3e-11 72.0 76 43.4
Carub.0003s0509 Capsella rubella HOM05D011267 ORTHO05D013190 1.7e-06 55.8 78 41.0
AT1G34047 Arabidopsis thaliana HOM05D007338 ORTHO05D009406 6.4e-06 53.9 79 40.5
BraA05t22946Z Brassica rapa HOM05D011267 ORTHO05D013190 6.4e-06 53.9 87 35.6


User provided reference genes

Program Settings