Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G14900 Arabidopsis lyrata HOM05D008317 ORTHO05D010808 7.8e-55 216.9 107 100.0
AT2G24285 Arabidopsis thaliana HOM05D008317 ORTHO05D010808 3.3e-37 158.3 104 77.9
AL4G14960 Arabidopsis lyrata HOM05D008317 ORTHO05D010808 6.0e-31 137.5 107 68.2
AL4G18590 Arabidopsis lyrata HOM05D008317 ORTHO05D010808 7.8e-31 137.1 106 65.1
AL4G15690 Arabidopsis lyrata HOM05D008317 ORTHO05D010808 1.9e-29 132.5 106 63.2
Carub.0004s0421 Capsella rubella HOM05D008317 ORTHO05D010808 2.0e-26 122.5 107 57.0
AT2G24480 Arabidopsis thaliana HOM05D008317 ORTHO05D010808 2.9e-25 118.6 107 63.6
AL8G17380 Arabidopsis lyrata HOM05D008317 ORTHO05D010808 1.4e-24 116.3 107 60.7
AL4G14890 Arabidopsis lyrata HOM05D001404 ORTHO05D010808 3.5e-23 111.7 114 61.4
AT5G43200 Arabidopsis thaliana HOM05D008317 ORTHO05D010808 1.0e-22 110.2 108 57.4
AT3G28620 Arabidopsis thaliana HOM05D008317 ORTHO05D010808 1.9e-21 105.9 108 53.7
AT3G42940 Arabidopsis thaliana HOM05D008317 ORTHO05D010808 1.9e-21 105.9 107 54.2
Carub.0004s0382 Capsella rubella HOM05D008317 ORTHO05D010808 9.6e-21 103.6 109 51.4
Thhalv10003018m.g Eutrema salsugineum HOM05D008317 ORTHO05D010808 6.2e-20 100.9 103 46.6
AT2G24460 Arabidopsis thaliana HOM05D008317 ORTHO05D010808 4.9e-17 91.3 106 51.9
A04p18780 Brassica napus HOM05D008317 ORTHO05D010808 1.8e-14 82.8 104 42.3
BraA04t17487Z Brassica rapa HOM05D008317 ORTHO05D010808 6.7e-14 80.9 104 41.3
CARHR117550 Cardamine hirsuta HOM05D008317 ORTHO05D010808 1.6e-12 76.3 99 42.4
BraA04t17491Z Brassica rapa HOM05D008317 ORTHO05D010808 2.1e-12 75.9 109 43.1
BcaB06g27971 Brassica carinata HOM05D008317 ORTHO05D010808 4.8e-12 74.7 106 39.6
BcaC02g08453 Brassica carinata HOM05D008317 ORTHO05D010808 4.8e-12 74.7 104 40.4
BolC4t26958H Brassica oleracea HOM05D008317 ORTHO05D010808 4.8e-12 74.7 104 40.4
BcaC02g08445 Brassica carinata HOM05D008317 ORTHO05D010808 1.1e-11 73.6 109 43.1
C04p54130 Brassica napus HOM05D008317 ORTHO05D010808 1.1e-11 73.6 109 43.1
BolC4t26965H Brassica oleracea HOM05D008317 ORTHO05D010808 1.1e-11 73.6 109 43.1
BolC8t51496H Brassica oleracea HOM05D008317 ORTHO05D010808 1.8e-11 72.8 105 41.0
BraA09t41023Z Brassica rapa HOM05D008317 ORTHO05D010808 1.8e-11 72.8 105 41.0
A09p56280 Brassica napus HOM05D008317 ORTHO05D010808 2.4e-11 72.4 105 41.0
C04p54070 Brassica napus HOM05D008317 ORTHO05D010808 3.1e-11 72.0 104 38.5
BcaC07g40928 Brassica carinata HOM05D008317 ORTHO05D010808 5.3e-11 71.2 105 40.0
BcaC07g40929 Brassica carinata HOM05D008317 ORTHO05D010808 5.3e-11 71.2 105 40.0
C08p39230 Brassica napus HOM05D008317 ORTHO05D010808 5.3e-11 71.2 105 40.0
A04p18900 Brassica napus HOM05D008317 ORTHO05D010808 6.9e-11 70.9 104 39.4
BraA04t17492Z Brassica rapa HOM05D008317 ORTHO05D010808 9.0e-11 70.5 104 39.4
Sp4g03480 Schrenkiella parvula HOM05D008317 ORTHO05D010808 5.8e-10 67.8 104 40.4
BcaB06g27982 Brassica carinata HOM05D008317 ORTHO05D010808 1.0e-09 67.0 85 40.0
Aa31sc15G80 Aethionema arabicum HOM05D008317 ORTHO05D010808 4.2e-08 61.6 107 36.4
A04p18820 Brassica napus HOM05D008317 ORTHO05D010808 2.1e-07 59.3 99 42.4
AL4G17000 Arabidopsis lyrata HOM05D008317 ORTHO05D012776 3.5e-07 58.5 106 38.7
Aa31LG9G5630 Aethionema arabicum HOM05D008317 ORTHO05D010808 6.0e-07 57.8 107 35.5
Aa31sc15G70 Aethionema arabicum HOM05D008317 ORTHO05D010808 6.0e-07 57.8 107 35.5
BcaB06g27977 Brassica carinata HOM05D008317 ORTHO05D010808 5.1e-06 54.7 109 38.5
BcaC07g40927 Brassica carinata HOM05D015942 ORTHO05D015884 6.7e-06 54.3 106 34.0
C08p39220 Brassica napus HOM05D015942 ORTHO05D015884 6.7e-06 54.3 106 34.0


User provided reference genes

Program Settings