Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G14580 Arabidopsis lyrata HOM05D031540 ORTHO05D014741 8.0e-68 260.4 140 100.0
AL4G14240 Arabidopsis lyrata HOM05D031540 ORTHO05D014741 3.1e-51 205.3 110 99.1
AL5G19250 Arabidopsis lyrata HOM05D031540 ORTHO05D014741 2.0e-50 202.6 110 98.2
AL2G19550 Arabidopsis lyrata HOM05D031540 ORTHO05D014741 8.4e-49 197.2 110 96.4
AT1G27750 Arabidopsis thaliana HOM05D001879 ORTHO05D007648 1.5e-34 149.8 93 88.2
AL1G41280 Arabidopsis lyrata HOM05D001879 ORTHO05D007648 2.5e-29 132.5 93 81.7
Thhalv10006638m.g Eutrema salsugineum HOM05D001879 ORTHO05D007648 5.3e-27 124.8 92 77.2
BcaC05g26775 Brassica carinata HOM05D001879 ORTHO05D007648 3.2e-24 115.5 92 71.7
Aa31sc113G20 Aethionema arabicum HOM05D001879 ORTHO05D007648 8.7e-22 107.5 76 77.6
C05p26440 Brassica napus HOM05D001879 ORTHO05D007648 1.9e-21 106.3 92 68.5
BolC5t31365H Brassica oleracea HOM05D001879 ORTHO05D007648 1.9e-21 106.3 92 68.5
Sp1g23980 Schrenkiella parvula HOM05D001879 ORTHO05D007648 7.6e-18 94.4 92 63.0
A09p38350 Brassica napus HOM05D001879 ORTHO05D007648 1.4e-16 90.1 92 60.9
BraA09t39344Z Brassica rapa HOM05D001879 ORTHO05D007648 1.9e-16 89.7 92 60.9
Carub.0001s2626 Capsella rubella HOM05D001879 ORTHO05D007648 2.5e-13 79.3 43 93.0
Atru.chr13.820 Acer truncatum HOM05D001879 ORTHO05D007648 9.0e-11 70.9 101 47.5
ClCG05G020550 Citrullus lanatus HOM05D001879 ORTHO05D007648 4.5e-10 68.6 82 47.6
Cpa.g.sc142.15 Carica papaya HOM05D001879 ORTHO05D007648 7.6e-10 67.8 88 51.1
Rhsim07G0220800 Rhododendron simsii HOM05D001879 ORTHO05D007648 6.5e-09 64.7 92 44.6
Nn5g30557 Nelumbo nucifera HOM05D001879 ORTHO05D007648 1.4e-08 63.5 66 54.5
SHI08393 Sapria himalayana HOM05D001879 ORTHO05D007648 1.4e-08 63.5 63 57.1
Ciclev10003334m.g Citrus clementina HOM05D001879 ORTHO05D007648 2.5e-08 62.8 85 51.8
MELO3C016811.2 Cucumis melo HOM05D001879 ORTHO05D007648 2.5e-08 62.8 63 50.8
Actinidia10192 Actinidia chinensis HOM05D001879 ORTHO05D007648 4.2e-08 62.0 80 50.0
CANSAT25G1585 Cannabis sativa HOM05D001879 ORTHO05D007648 1.6e-07 60.1 75 45.3
CSS0015613 Camellia sinensis var. sinensis HOM05D001879 ORTHO05D007648 6.1e-07 58.2 73 52.1
TAR633G2582 Trochodendron aralioides HOM05D001879 ORTHO05D007648 6.1e-07 58.2 65 50.8
Nitab4.5_0000164g0150 Nicotiana tabacum HOM05D001879 ORTHO05D007648 7.9e-07 57.8 54 59.3
Nitab4.5_0003803g0020 Nicotiana tabacum HOM05D001879 ORTHO05D007648 7.9e-07 57.8 54 59.3
CsaV3_4G034990 Cucumis sativus L. HOM05D001879 ORTHO05D007648 1.0e-06 57.4 54 51.9
QL12p037902 Quercus lobata HOM05D001879 ORTHO05D007648 1.3e-06 57.0 49 55.1
FvH4_2g33220 Fragaria vesca HOM05D001879 ORTHO05D007648 2.3e-06 56.2 58 51.7
FAN24G0874 Fragaria x ananassa HOM05D001879 ORTHO05D007648 2.3e-06 56.2 58 51.7
Prupe.1G423900 Prunus persica HOM05D001879 ORTHO05D007648 2.3e-06 56.2 94 42.6
RcHm_v2.0_Chr6g0309441 Rosa chinensis HOM05D001879 ORTHO05D007648 2.3e-06 56.2 58 53.4
Lsat_1_v5_gn_1_24340 Lactuca sativa HOM05D001879 ORTHO05D007648 3.0e-06 55.8 88 44.3
Sed0027780 Sechium edule HOM05D001879 ORTHO05D007648 3.0e-06 55.8 53 49.1
Cfa013681 Carpinus fangiana HOM05D001879 ORTHO05D007648 6.7e-06 54.7 54 50.0
Oeu022102.3 Olea europaea HOM05D001879 ORTHO05D007648 8.7e-06 54.3 96 46.9


User provided reference genes

Program Settings